Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20443
(533 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1565.08 |cdc48|SPAC6F12.01|AAA family ATPase Cdc48|Schizosac... 153 2e-38
SPAC17A5.01 |pex6||peroxin-6 |Schizosaccharomyces pombe|chr 1|||... 120 1e-28
SPBC16E9.10c |||AAA family ATPase Rix7 |Schizosaccharomyces pomb... 112 3e-26
SPBC56F2.07c |||AAA family ATPase, unknown biological role|Schiz... 108 6e-25
SPCC553.03 |pex1||AAA family ATPase Pex1 |Schizosaccharomyces po... 95 6e-21
SPBC16C6.07c |rpt1||19S proteasome regulatory subunit Rpt1|Schiz... 94 1e-20
SPCC576.10c |rpt3||19S proteasome regulatory subunit Rpt3|Schizo... 92 4e-20
SPAC31G5.19 |||ATPase with bromodomain protein|Schizosaccharomyc... 90 2e-19
SPAC3A11.12c |rpt5|pam2, tbp1|19S proteasome regulatory subunit ... 88 7e-19
SPAC2G11.06 |vps4||AAA family ATPase Vps4|Schizosaccharomyces po... 87 2e-18
SPCC1682.16 |rpt4||19S proteasome regulatory subunit Rpt4|Schizo... 86 3e-18
SPBC543.09 |||mitochondrial m-AAA protease|Schizosaccharomyces p... 83 3e-17
SPBC23G7.12c |rpt6|let1|19S proteasome regulatory subunit Rpt6|S... 83 3e-17
SPBC4.07c |rpt2|mts2|19S proteasome regulatory subunit Rpt2|Schi... 83 3e-17
SPBP22H7.05c |||ATPase with bromodomain protein|Schizosaccharomy... 82 6e-17
SPCC24B10.10c |||mitochondrial outer membrane ATPase Msp1 |Schiz... 81 8e-17
SPAC328.04 |||AAA family ATPase, unknown biological role|Schizos... 80 2e-16
SPBC947.01 |||AAA family ATPase, unknown biological role|Schizos... 75 5e-15
SPCC965.04c |||mitochondrial inner membrane i-AAA protease compl... 73 4e-14
SPAC1834.11c |sec18||secretory pathway protein Sec18 |Schizosacc... 63 2e-11
SPAC644.07 |||Rieske ISP assembly protein|Schizosaccharomyces po... 40 2e-04
SPAPB8E5.09 |||AAA family ATPase Rvb1 |Schizosaccharomyces pombe... 33 0.020
SPBC16D10.08c |||heat shock protein Hsp104 |Schizosaccharomyces ... 33 0.020
SPAC1093.06c |dhc1|SPAC30C2.01c|dynein heavy chain |Schizosaccha... 33 0.020
SPBC83.08 |||AAA family ATPase Rvb2 |Schizosaccharomyces pombe|c... 33 0.027
SPAC27E2.10c |rfc3|SPAPJ698.01c|DNA replication factor C complex... 31 0.11
SPBC4F6.17c |||mitochondrial matrix chaperone Hsp78 |Schizosacch... 30 0.25
SPCC825.01 |||ribosome biogenesis ATPase, Arb family |Schizosacc... 29 0.33
SPAC22F3.06c |lon1||Lon protease homolog Lon1|Schizosaccharomyce... 28 1.0
SPAC14C4.13 |rad17||RFC related checkpoint protein Rad17|Schizos... 28 1.0
SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase Y|Schizosacch... 27 1.3
SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1 |Schi... 27 1.3
SPAC23D3.02 |rfc2||DNA replication factor C complex subunit Rfc2... 27 1.8
SPBC23E6.07c |rfc1||DNA replication factor C complex subunit Rfc... 27 1.8
SPBC1709.08 |cft1||cleavage factor one Cft1 |Schizosaccharomyces... 27 2.3
SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual 27 2.3
SPAC4G9.12 |||gluconokinase|Schizosaccharomyces pombe|chr 1|||Ma... 26 3.1
SPCC737.07c |||DNA polymerase alpha-associated DNA helicase A |S... 26 4.1
SPBC115.02c |||AFG1 family mitochondrial ATPase|Schizosaccharomy... 26 4.1
SPBC947.06c |||spermidine family transporter |Schizosaccharomyce... 26 4.1
SPBC21D10.06c |map4||cell agglutination protein Map4|Schizosacch... 26 4.1
SPAC30D11.09 |cwf19||complexed with Cdc5 protein Cwf19 |Schizosa... 26 4.1
SPCC1450.02 ||SPCC191.13|bromodomain protein|Schizosaccharomyces... 25 5.4
SPAC186.09 |||pyruvate decarboxylase |Schizosaccharomyces pombe|... 25 5.4
SPBC31E1.06 |bms1|SPBC800.01|GTP binding protein Bms1|Schizosacc... 25 5.4
SPBC776.12c |hsk1||serine/threonine protein kinase Hsk1|Schizosa... 25 5.4
SPCC830.11c |||adenylate kinase |Schizosaccharomyces pombe|chr 3... 25 7.1
SPCC1235.01 ||SPCC320.02c|sequence orphan|Schizosaccharomyces po... 25 7.1
SPBC1685.15c |klp6|sot2, SPBC649.01c|kinesin-like protein Klp6|S... 25 7.1
SPCC1020.02 |spc7||kinetochore protein Spc7|Schizosaccharomyces ... 25 7.1
>SPAC1565.08 |cdc48|SPAC6F12.01|AAA family ATPase
Cdc48|Schizosaccharomyces pombe|chr 1|||Manual
Length = 815
Score = 153 bits (371), Expect = 2e-38
Identities = 69/90 (76%), Positives = 83/90 (92%), Gaps = 1/90 (1%)
Frame = +2
Query: 8 SDKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANV 187
++KFL+FG+ PS+GVLF+GPPG GKTLLAKAIANEC ANFISVKGPELL+MWFGESE+NV
Sbjct: 520 AEKFLRFGVTPSKGVLFFGPPGTGKTLLAKAIANECSANFISVKGPELLSMWFGESESNV 579
Query: 188 RDIFDKARSASPCVLFFDELDS-TQSRAAA 274
RDIFDKAR+A+PCV+F DELDS ++R A+
Sbjct: 580 RDIFDKARAAAPCVVFLDELDSIAKARGAS 609
Score = 96.3 bits (229), Expect = 3e-21
Identities = 40/79 (50%), Positives = 57/79 (72%)
Frame = +2
Query: 17 FLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVRDI 196
F G++P RG+L YGPPG GKTL+A+A+ANE A F + GPE+++ GESE+N+R
Sbjct: 250 FKSIGIKPPRGILMYGPPGTGKTLMARAVANETGAFFFLINGPEIMSKMAGESESNLRKA 309
Query: 197 FDKARSASPCVLFFDELDS 253
F++A SP ++F DE+DS
Sbjct: 310 FEEAEKNSPAIIFIDEIDS 328
Score = 91.1 bits (216), Expect = 1e-19
Identities = 38/49 (77%), Positives = 46/49 (93%)
Frame = +1
Query: 307 VINQILTEMDGMGAKKNVFIIGATNRPDIIDPAILRPGRLDHLIYIPLP 453
V+NQ+LTEMDG+ +KKNVF+IGATNRPD IDPA++RPGRLD LIY+PLP
Sbjct: 619 VVNQLLTEMDGVNSKKNVFVIGATNRPDQIDPALMRPGRLDQLIYVPLP 667
Score = 57.2 bits (132), Expect = 1e-09
Identities = 25/49 (51%), Positives = 36/49 (73%)
Frame = +1
Query: 307 VINQILTEMDGMGAKKNVFIIGATNRPDIIDPAILRPGRLDHLIYIPLP 453
V++Q+LT MDGM A+ NV ++ ATNRP+ IDPA+ R GR D + + +P
Sbjct: 344 VVSQLLTLMDGMKARSNVVVMAATNRPNSIDPALRRFGRFDREVDVGIP 392
>SPAC17A5.01 |pex6||peroxin-6 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 948
Score = 120 bits (290), Expect = 1e-28
Identities = 52/75 (69%), Positives = 64/75 (85%)
Frame = +2
Query: 29 GMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVRDIFDKA 208
G++P GVL YGPPG GKTLLAKA+A E F+S+KGPELL M+ GESEANVR++F+KA
Sbjct: 684 GLKPRSGVLLYGPPGTGKTLLAKAVATELSLEFVSIKGPELLNMYVGESEANVRNVFEKA 743
Query: 209 RSASPCVLFFDELDS 253
R++SPCV+FFDELDS
Sbjct: 744 RNSSPCVIFFDELDS 758
Score = 64.1 bits (149), Expect = 1e-11
Identities = 27/59 (45%), Positives = 42/59 (71%), Gaps = 2/59 (3%)
Frame = +1
Query: 307 VINQILTEMDGMGAKKN--VFIIGATNRPDIIDPAILRPGRLDHLIYIPLPTRSPARPS 477
V++Q+L E+D + N VF+IGATNRPD++DP++LRPGR D L+Y+ + ++ S
Sbjct: 776 VVSQLLAELDSISKDNNKYVFVIGATNRPDLLDPSLLRPGRFDKLVYLGINKSEESKAS 834
>SPBC16E9.10c |||AAA family ATPase Rix7 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 779
Score = 112 bits (270), Expect = 3e-26
Identities = 50/79 (63%), Positives = 63/79 (79%)
Frame = +2
Query: 29 GMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVRDIFDKA 208
G+ GVL +GPPGCGKTLLAKA+ANE +ANFIS++GPELL + GESE VR +F +A
Sbjct: 522 GISAPTGVLLWGPPGCGKTLLAKAVANESKANFISIRGPELLNKYVGESERAVRQVFLRA 581
Query: 209 RSASPCVLFFDELDSTQSR 265
R++SPCV+FFDELD+ R
Sbjct: 582 RASSPCVIFFDELDAMVPR 600
Score = 97.5 bits (232), Expect = 1e-21
Identities = 42/83 (50%), Positives = 61/83 (73%), Gaps = 1/83 (1%)
Frame = +2
Query: 29 GMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVRDIFDKA 208
G+ P RGVL +GPPGCGKT+LA A+ANE FIS+ P +++ GESE VR++F++A
Sbjct: 204 GIHPPRGVLLHGPPGCGKTMLANALANELGVPFISISAPSIVSGMSGESEKKVREVFEEA 263
Query: 209 RSASPCVLFFDELDS-TQSRAAA 274
+S +PC++F DE+D+ T R +A
Sbjct: 264 KSLAPCLMFIDEIDAVTPKRESA 286
Score = 70.9 bits (166), Expect = 1e-13
Identities = 29/49 (59%), Positives = 39/49 (79%)
Frame = +1
Query: 307 VINQILTEMDGMGAKKNVFIIGATNRPDIIDPAILRPGRLDHLIYIPLP 453
V+N +LTE+DG+ + V++I ATNRPDIIDPA+LRPGRLD + + LP
Sbjct: 612 VVNTLLTELDGLSDRSGVYVIAATNRPDIIDPAMLRPGRLDKTLLVDLP 660
Score = 46.8 bits (106), Expect = 2e-06
Identities = 28/70 (40%), Positives = 39/70 (55%), Gaps = 4/70 (5%)
Frame = +1
Query: 307 VINQILTEMDGMGAKKN----VFIIGATNRPDIIDPAILRPGRLDHLIYIPLPTRSPARP 474
++ Q LT MD + +K V +IGATNRPD +D A+ R GR D I + +P++ AR
Sbjct: 294 IVAQFLTCMDELSFEKTDGKPVLVIGATNRPDSLDSALRRAGRFDREICLTVPSQD-ARE 352
Query: 475 SCAPTFANRL 504
T A L
Sbjct: 353 KILRTMAKGL 362
>SPBC56F2.07c |||AAA family ATPase, unknown biological
role|Schizosaccharomyces pombe|chr 2|||Manual
Length = 809
Score = 108 bits (259), Expect = 6e-25
Identities = 48/81 (59%), Positives = 60/81 (74%)
Frame = +2
Query: 11 DKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVR 190
+ F + G++P +GVL YGPPGC KT+ AKAIA E NFI+VKGPEL + GESE VR
Sbjct: 572 ETFSRLGVRPPKGVLLYGPPGCSKTITAKAIATETGLNFIAVKGPELFDKFVGESERAVR 631
Query: 191 DIFDKARSASPCVLFFDELDS 253
+F KAR ASP V+FFDE+D+
Sbjct: 632 QVFQKARQASPSVIFFDEIDA 652
Score = 83.8 bits (198), Expect = 1e-17
Identities = 34/79 (43%), Positives = 53/79 (67%)
Frame = +2
Query: 17 FLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVRDI 196
F F + P RGVL YGPPG GKT++ +A+A E A ++ GP ++ + GE+E+ +R I
Sbjct: 305 FKFFNIMPPRGVLLYGPPGTGKTMVMRAVAAEANAQVFTIDGPSVVGKYLGETESRLRKI 364
Query: 197 FDKARSASPCVLFFDELDS 253
F+ AR+ P ++F DE+D+
Sbjct: 365 FEDARAHQPSIIFIDEIDA 383
Score = 67.3 bits (157), Expect = 1e-12
Identities = 27/49 (55%), Positives = 39/49 (79%)
Frame = +1
Query: 307 VINQILTEMDGMGAKKNVFIIGATNRPDIIDPAILRPGRLDHLIYIPLP 453
V+ +L E+DG+ A +NV ++ ATNRPD+IDPA++RPGRLD L+Y+ P
Sbjct: 666 VVAALLNELDGIEALRNVLVLAATNRPDMIDPALMRPGRLDRLLYVGPP 714
Score = 50.0 bits (114), Expect = 2e-07
Identities = 24/48 (50%), Positives = 32/48 (66%)
Frame = +1
Query: 319 ILTEMDGMGAKKNVFIIGATNRPDIIDPAILRPGRLDHLIYIPLPTRS 462
+LT +DGM V +I ATNRP+ ID A+ RPGRL+ I I +P +S
Sbjct: 403 LLTLLDGMANAGKVVVIAATNRPNSIDEALRRPGRLEKEIEIGIPDKS 450
>SPCC553.03 |pex1||AAA family ATPase Pex1 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 937
Score = 95.1 bits (226), Expect = 6e-21
Identities = 42/73 (57%), Positives = 52/73 (71%)
Frame = +2
Query: 47 GVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVRDIFDKARSASPC 226
G+L +G PGCGKT LA AI++ FIS+KGPELL + G+SE VRD+F +A+ A PC
Sbjct: 642 GILLFGYPGCGKTYLASAISSTFPVQFISIKGPELLDKYIGKSEQGVRDLFSRAQMAKPC 701
Query: 227 VLFFDELDSTQSR 265
VLFFDE DS R
Sbjct: 702 VLFFDEFDSVAPR 714
Score = 71.3 bits (167), Expect = 8e-14
Identities = 35/65 (53%), Positives = 43/65 (66%)
Frame = +1
Query: 307 VINQILTEMDGMGAKKNVFIIGATNRPDIIDPAILRPGRLDHLIYIPLPTRSPARPSCAP 486
V+NQILT+MDG + V+I+ AT RPD+IDPA+LRPGRLD LI+ LP R
Sbjct: 726 VVNQILTQMDGAESLDGVYIVAATTRPDMIDPALLRPGRLDKLIFCDLPNEE-ERLEVLQ 784
Query: 487 TFANR 501
ANR
Sbjct: 785 KLANR 789
Score = 27.5 bits (58), Expect = 1.3
Identities = 16/72 (22%), Positives = 34/72 (47%), Gaps = 4/72 (5%)
Frame = +2
Query: 44 RGVLFYGPPGCGKTLLAKAIANECQANFI----SVKGPELLTMWFGESEANVRDIFDKAR 211
+ + GP GCGK+ L ++ + N I V E+ F + ++ ++F +A
Sbjct: 373 QNIYINGPKGCGKSNLVHSLFDYYSLNSIYFQMIVSCSEIDRSSFAKFQSFWNNVFIQAE 432
Query: 212 SASPCVLFFDEL 247
P +++ D++
Sbjct: 433 RYEPSIIYLDDV 444
>SPBC16C6.07c |rpt1||19S proteasome regulatory subunit
Rpt1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 438
Score = 94.3 bits (224), Expect = 1e-20
Identities = 38/81 (46%), Positives = 57/81 (70%)
Frame = +2
Query: 11 DKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVR 190
++F+K G+ P +G++ YGPPG GKTL A+A+AN A FI V G EL+ + GE VR
Sbjct: 203 ERFVKLGIDPPKGIMLYGPPGTGKTLCARAVANRTDATFIRVIGSELVQKYVGEGARMVR 262
Query: 191 DIFDKARSASPCVLFFDELDS 253
++F+ AR+ C++FFDE+D+
Sbjct: 263 ELFEMARTKKACIIFFDEIDA 283
Score = 50.0 bits (114), Expect = 2e-07
Identities = 18/46 (39%), Positives = 33/46 (71%)
Frame = +1
Query: 316 QILTEMDGMGAKKNVFIIGATNRPDIIDPAILRPGRLDHLIYIPLP 453
+++T++DG + N+ ++ ATNRP+ +D A++RPGR+D + LP
Sbjct: 305 ELITQLDGFDPRGNIKVLFATNRPNTLDEALMRPGRIDRKVEFGLP 350
>SPCC576.10c |rpt3||19S proteasome regulatory subunit
Rpt3|Schizosaccharomyces pombe|chr 3|||Manual
Length = 389
Score = 92.3 bits (219), Expect = 4e-20
Identities = 40/85 (47%), Positives = 55/85 (64%)
Frame = +2
Query: 11 DKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVR 190
D + + G+ P RGVL YGPPG GKT+L KA+AN ANFI V G E + + GE VR
Sbjct: 158 DLYRQIGIDPPRGVLLYGPPGTGKTMLVKAVANSTAANFIRVVGSEFVQKYLGEGPRMVR 217
Query: 191 DIFDKARSASPCVLFFDELDSTQSR 265
D+F AR +P ++F DE+D+ ++
Sbjct: 218 DVFRMARENAPAIIFIDEIDAIATK 242
Score = 56.0 bits (129), Expect = 3e-09
Identities = 25/47 (53%), Positives = 33/47 (70%)
Frame = +1
Query: 307 VINQILTEMDGMGAKKNVFIIGATNRPDIIDPAILRPGRLDHLIYIP 447
++ ++LT+MDG NV +I ATNR D +DPA+LRPGRLD I P
Sbjct: 257 ILIELLTQMDGFDQGANVKVIMATNRADTLDPALLRPGRLDRKIEFP 303
>SPAC31G5.19 |||ATPase with bromodomain protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1190
Score = 90.2 bits (214), Expect = 2e-19
Identities = 40/83 (48%), Positives = 58/83 (69%), Gaps = 5/83 (6%)
Frame = +2
Query: 17 FLKFGMQPSRGVLFYGPPGCGKTLLAKAIANEC-----QANFISVKGPELLTMWFGESEA 181
F +F MQP RGVLF+GPPG GKTL+A+A+A C + +F KG + L+ W GE+E
Sbjct: 292 FQRFNMQPPRGVLFHGPPGTGKTLMARALAAACSSENKKVSFYMRKGADCLSKWVGEAER 351
Query: 182 NVRDIFDKARSASPCVLFFDELD 250
+R +F++A+S P ++FFDE+D
Sbjct: 352 QLRLLFEEAKSTQPSIIFFDEID 374
Score = 66.5 bits (155), Expect = 2e-12
Identities = 28/51 (54%), Positives = 36/51 (70%)
Frame = +1
Query: 307 VINQILTEMDGMGAKKNVFIIGATNRPDIIDPAILRPGRLDHLIYIPLPTR 459
+++ +L MDGM ++ V IIGATNRPD +DPA+ RPGR D Y PLP R
Sbjct: 391 IVSTLLALMDGMESRGQVIIIGATNRPDAVDPALRRPGRFDREFYFPLPDR 441
>SPAC3A11.12c |rpt5|pam2, tbp1|19S proteasome regulatory subunit
Rpt5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 438
Score = 88.2 bits (209), Expect = 7e-19
Identities = 38/82 (46%), Positives = 55/82 (67%)
Frame = +2
Query: 8 SDKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANV 187
+DKF K G++P +G L +GPPG GKTLLA+A A + A F+ + P+L+ M+ G+ V
Sbjct: 208 ADKFRKLGVKPPKGCLMFGPPGTGKTLLARACAAQSNATFLKLAAPQLVQMFIGDGAKLV 267
Query: 188 RDIFDKARSASPCVLFFDELDS 253
RD F A+ SP ++F DELD+
Sbjct: 268 RDAFALAKEKSPAIIFIDELDA 289
Score = 52.4 bits (120), Expect = 4e-08
Identities = 22/46 (47%), Positives = 31/46 (67%)
Frame = +1
Query: 316 QILTEMDGMGAKKNVFIIGATNRPDIIDPAILRPGRLDHLIYIPLP 453
++L ++DG + V +I ATNR D +DPA+LR GRLD + PLP
Sbjct: 311 ELLNQLDGFSSDDRVKVIAATNRVDTLDPALLRSGRLDRKLEFPLP 356
>SPAC2G11.06 |vps4||AAA family ATPase Vps4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 432
Score = 86.6 bits (205), Expect = 2e-18
Identities = 36/75 (48%), Positives = 50/75 (66%)
Frame = +2
Query: 29 GMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVRDIFDKA 208
G +P G+L YGPPG GK+ LAKA+A E + F S+ +L++ W GESE VR +F+ A
Sbjct: 158 GRKPWSGILLYGPPGTGKSYLAKAVATEAGSTFFSISSSDLVSKWMGESERLVRQLFEMA 217
Query: 209 RSASPCVLFFDELDS 253
R P ++F DE+DS
Sbjct: 218 REQKPSIIFIDEIDS 232
>SPCC1682.16 |rpt4||19S proteasome regulatory subunit
Rpt4|Schizosaccharomyces pombe|chr 3|||Manual
Length = 388
Score = 86.2 bits (204), Expect = 3e-18
Identities = 37/83 (44%), Positives = 54/83 (65%)
Frame = +2
Query: 17 FLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVRDI 196
FL+ G++P +GVL YGPPG GKTLLA+A+A NF+ V ++ + GES +R++
Sbjct: 158 FLRVGIKPPKGVLLYGPPGTGKTLLARAVAASLGVNFLKVVSSAIVDKYIGESARIIREM 217
Query: 197 FDKARSASPCVLFFDELDSTQSR 265
F A+ PCV+F DE+D+ R
Sbjct: 218 FGYAKEHEPCVIFMDEIDAIGGR 240
Score = 58.0 bits (134), Expect = 8e-10
Identities = 27/46 (58%), Positives = 32/46 (69%)
Frame = +1
Query: 316 QILTEMDGMGAKKNVFIIGATNRPDIIDPAILRPGRLDHLIYIPLP 453
++L +MDG II ATNRPD +DPA+LRPGRLD I IPLP
Sbjct: 258 ELLNQMDGFDYLGQTKIIMATNRPDTLDPALLRPGRLDRKIEIPLP 303
>SPBC543.09 |||mitochondrial m-AAA protease|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 773
Score = 83.0 bits (196), Expect = 3e-17
Identities = 37/77 (48%), Positives = 49/77 (63%)
Frame = +2
Query: 23 KFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVRDIFD 202
+ G + RG + GPPG GKTLLAKA A E F+SV G E L M+ G + VRD+F
Sbjct: 323 RLGAKIPRGAILSGPPGTGKTLLAKATAGEANVPFLSVSGSEFLEMFVGVGPSRVRDLFA 382
Query: 203 KARSASPCVLFFDELDS 253
AR +PC++F DE+D+
Sbjct: 383 TARKNAPCIIFIDEIDA 399
Score = 60.9 bits (141), Expect = 1e-10
Identities = 24/48 (50%), Positives = 34/48 (70%)
Frame = +1
Query: 310 INQILTEMDGMGAKKNVFIIGATNRPDIIDPAILRPGRLDHLIYIPLP 453
+NQ+L EMDG + +++ + TNRPD++DPA+LRPGR D I I P
Sbjct: 420 LNQLLVEMDGFTSSEHIVVFAGTNRPDVLDPALLRPGRFDRQITIDRP 467
>SPBC23G7.12c |rpt6|let1|19S proteasome regulatory subunit
Rpt6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 403
Score = 82.6 bits (195), Expect = 3e-17
Identities = 37/82 (45%), Positives = 51/82 (62%)
Frame = +2
Query: 17 FLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVRDI 196
F G+ +G+L YGPPG GKTLLA+A+A+ FI V G EL+ + GE VR++
Sbjct: 171 FESLGIPQPKGILLYGPPGTGKTLLARAVAHHTDCKFIRVSGSELVQKYIGEGSRMVREL 230
Query: 197 FDKARSASPCVLFFDELDSTQS 262
F AR +P ++F DE+DS S
Sbjct: 231 FVMAREHAPSIIFMDEIDSIGS 252
Score = 58.4 bits (135), Expect = 6e-10
Identities = 25/47 (53%), Positives = 35/47 (74%)
Frame = +1
Query: 316 QILTEMDGMGAKKNVFIIGATNRPDIIDPAILRPGRLDHLIYIPLPT 456
++L ++DG A KN+ +I ATNR DI+DPA+LRPGR+D I P P+
Sbjct: 272 ELLNQLDGFEATKNIKVIMATNRIDILDPALLRPGRIDRKIEFPPPS 318
>SPBC4.07c |rpt2|mts2|19S proteasome regulatory subunit
Rpt2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 448
Score = 82.6 bits (195), Expect = 3e-17
Identities = 35/77 (45%), Positives = 52/77 (67%)
Frame = +2
Query: 23 KFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVRDIFD 202
+ G++P +GV+ YG PG GKTLLAKA+AN+ A F+ V G EL+ + G+ VR +F+
Sbjct: 219 EMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPRLVRQLFN 278
Query: 203 KARSASPCVLFFDELDS 253
A SP ++F DE+D+
Sbjct: 279 AAEEHSPSIVFIDEIDA 295
Score = 42.7 bits (96), Expect = 3e-05
Identities = 19/53 (35%), Positives = 34/53 (64%), Gaps = 1/53 (1%)
Frame = +1
Query: 316 QILTEMDGMG-AKKNVFIIGATNRPDIIDPAILRPGRLDHLIYIPLPTRSPAR 471
++L ++DG +++++ +I ATNR +DPA++RPGR+D I P + R
Sbjct: 317 ELLNQLDGFDTSQRDIKVIMATNRISDLDPALIRPGRIDRKILFENPDEATKR 369
>SPBP22H7.05c |||ATPase with bromodomain protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1201
Score = 81.8 bits (193), Expect = 6e-17
Identities = 37/83 (44%), Positives = 53/83 (63%), Gaps = 5/83 (6%)
Frame = +2
Query: 17 FLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQA-----NFISVKGPELLTMWFGESEA 181
FL + P RGVLF+GPPG GKTL+A+ +A C +F KG + L+ W GE+E
Sbjct: 398 FLHLHITPPRGVLFHGPPGTGKTLMARVLAANCSTKNQKISFFLRKGSDCLSKWVGEAER 457
Query: 182 NVRDIFDKARSASPCVLFFDELD 250
+R +F++AR P ++FFDE+D
Sbjct: 458 QLRLLFEEARRVQPSIIFFDEID 480
Score = 60.5 bits (140), Expect = 2e-10
Identities = 24/51 (47%), Positives = 35/51 (68%)
Frame = +1
Query: 307 VINQILTEMDGMGAKKNVFIIGATNRPDIIDPAILRPGRLDHLIYIPLPTR 459
+++ +L MDG+ + V +IGATNRP+ +DPA+ RPGR D Y PLP +
Sbjct: 497 IVSTLLALMDGLDTRGQVVVIGATNRPNDLDPALRRPGRFDREFYFPLPNK 547
>SPCC24B10.10c |||mitochondrial outer membrane ATPase Msp1
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 355
Score = 81.4 bits (192), Expect = 8e-17
Identities = 36/70 (51%), Positives = 47/70 (67%)
Frame = +2
Query: 44 RGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVRDIFDKARSASP 223
+G+L YGPPGCGKT+LAKA+A + QA FI+V L WFGES V +F AR P
Sbjct: 126 KGLLLYGPPGCGKTMLAKALAKQSQATFINVSVGLLTDKWFGESNKLVDALFTLARKLEP 185
Query: 224 CVLFFDELDS 253
++F DE+D+
Sbjct: 186 TIIFIDEIDT 195
Score = 35.5 bits (78), Expect = 0.005
Identities = 20/53 (37%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = +1
Query: 316 QILTEMDGM-GAKKNVFIIGATNRPDIIDPAILRPGRLDHLIYIPLPTRSPAR 471
+ ++ DG+ + V ++GATNRP ID AI R R+ + IPLP R
Sbjct: 214 EFMSMWDGLLSGQSRVLVLGATNRPADIDEAIRR--RMPKVFSIPLPNAEQRR 264
>SPAC328.04 |||AAA family ATPase, unknown biological
role|Schizosaccharomyces pombe|chr 1|||Manual
Length = 741
Score = 80.2 bits (189), Expect = 2e-16
Identities = 35/76 (46%), Positives = 52/76 (68%)
Frame = +2
Query: 35 QPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVRDIFDKARS 214
+P+RG+L +GPPG GKT+LA+A+A E ++ F S+ L + + GESE VR +F A+
Sbjct: 490 EPARGMLLFGPPGTGKTMLARAVATESRSVFFSISASSLTSKFLGESEKLVRALFTLAKK 549
Query: 215 ASPCVLFFDELDSTQS 262
SP ++F DE+DS S
Sbjct: 550 LSPSIIFVDEIDSLLS 565
>SPBC947.01 |||AAA family ATPase, unknown biological
role|Schizosaccharomyces pombe|chr 2|||Manual
Length = 660
Score = 75.4 bits (177), Expect = 5e-15
Identities = 33/76 (43%), Positives = 51/76 (67%)
Frame = +2
Query: 35 QPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVRDIFDKARS 214
+P +G+L +GPPG GKT+LA+A+A E +A F S+ L + + G+SE VR +F+ A+
Sbjct: 410 EPVQGMLLFGPPGTGKTMLARAVATEAKATFFSISASSLTSKYLGDSEKLVRALFEVAKR 469
Query: 215 ASPCVLFFDELDSTQS 262
+ V+F DE+DS S
Sbjct: 470 QTCSVIFVDEIDSILS 485
>SPCC965.04c |||mitochondrial inner membrane i-AAA protease complex
subunit Yme1 |Schizosaccharomyces pombe|chr 3|||Manual
Length = 709
Score = 72.5 bits (170), Expect = 4e-14
Identities = 33/79 (41%), Positives = 47/79 (59%)
Frame = +2
Query: 17 FLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVRDI 196
F + G + RGVL GPPG GKT+LA+A+A E F + G + M+ G VR++
Sbjct: 292 FTRLGGKLPRGVLLTGPPGTGKTMLARAVAGEANVPFFFMSGSQFDEMYVGVGAKRVREL 351
Query: 197 FDKARSASPCVLFFDELDS 253
F AR +P ++F DELD+
Sbjct: 352 FAAARKQAPSIIFIDELDA 370
Score = 54.0 bits (124), Expect = 1e-08
Identities = 24/52 (46%), Positives = 35/52 (67%), Gaps = 4/52 (7%)
Frame = +1
Query: 310 INQILTEMDGMGAKKN----VFIIGATNRPDIIDPAILRPGRLDHLIYIPLP 453
+NQ+L ++DG ++ V IGATN P+ +DPA+ RPGR D I++PLP
Sbjct: 387 LNQLLVDLDGFSKNEDLAHPVVFIGATNFPESLDPALTRPGRFDRHIHVPLP 438
>SPAC1834.11c |sec18||secretory pathway protein Sec18
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 792
Score = 63.3 bits (147), Expect = 2e-11
Identities = 34/86 (39%), Positives = 48/86 (55%), Gaps = 9/86 (10%)
Frame = +2
Query: 23 KFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFIS-VKGPELLTMWFGESEANVRDIF 199
K G+ +G+L YGPPG GKTL+A+ I A V GPE+L + G+SE NVR +F
Sbjct: 298 KLGINHVKGILLYGPPGTGKTLIARQIGKMLNAREPKIVNGPEILNKYVGQSEENVRKLF 357
Query: 200 --------DKARSASPCVLFFDELDS 253
D+ + ++ FDELD+
Sbjct: 358 ADAEREYRDRGEESGLHIIIFDELDA 383
Score = 59.3 bits (137), Expect = 4e-10
Identities = 26/49 (53%), Positives = 36/49 (73%)
Frame = +1
Query: 307 VINQILTEMDGMGAKKNVFIIGATNRPDIIDPAILRPGRLDHLIYIPLP 453
V+NQ+L +MDG+ N+ +IG TNR D+ID A+LRPGRL+ + I LP
Sbjct: 401 VVNQLLAKMDGVDQLNNILVIGMTNRKDMIDEALLRPGRLEVHMEISLP 449
>SPAC644.07 |||Rieske ISP assembly protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 449
Score = 39.9 bits (89), Expect = 2e-04
Identities = 18/51 (35%), Positives = 28/51 (54%)
Frame = +1
Query: 319 ILTEMDGMGAKKNVFIIGATNRPDIIDPAILRPGRLDHLIYIPLPTRSPAR 471
+L +DG+ + I TN P+ +DPA++RPGR+D Y+ T R
Sbjct: 327 LLNALDGVTSSDERIIFMTTNHPEKLDPALVRPGRVDVKAYLGNATPEQVR 377
Score = 33.9 bits (74), Expect = 0.015
Identities = 15/28 (53%), Positives = 17/28 (60%)
Frame = +2
Query: 29 GMQPSRGVLFYGPPGCGKTLLAKAIANE 112
G+ RG L YGPPG GKT A+A E
Sbjct: 238 GIPYRRGYLLYGPPGSGKTSFLYALAGE 265
>SPAPB8E5.09 |||AAA family ATPase Rvb1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 456
Score = 33.5 bits (73), Expect = 0.020
Identities = 24/58 (41%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Frame = +2
Query: 14 KFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANEC--QANFISVKGPELLTMWFGESEA 181
K KFG +GVLF G G GKT LA AIA E + F + G E+ + ++EA
Sbjct: 58 KSKKFG---GKGVLFAGGAGTGKTALALAIAQELGPKVPFCPMVGSEVYSSEIKKTEA 112
>SPBC16D10.08c |||heat shock protein Hsp104 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 905
Score = 33.5 bits (73), Expect = 0.020
Identities = 15/25 (60%), Positives = 17/25 (68%)
Frame = +2
Query: 35 QPSRGVLFYGPPGCGKTLLAKAIAN 109
QP LF GP G GKTLL KA+A+
Sbjct: 612 QPIASFLFCGPSGTGKTLLTKALAS 636
Score = 25.8 bits (54), Expect = 4.1
Identities = 22/75 (29%), Positives = 36/75 (48%), Gaps = 13/75 (17%)
Frame = +2
Query: 62 GPPGCGKTLLAKAIA-----NECQANFISVK------GPELLTMWF-GESEANVRDIFDK 205
G PG GKT +A+ +A ++ AN + K G + F GE E ++ + +
Sbjct: 209 GEPGVGKTSIAEGLARRIIDDDVPANLSNCKLLSLDVGSLVAGSKFRGEFEERIKSVLKE 268
Query: 206 A-RSASPCVLFFDEL 247
S +P +LF DE+
Sbjct: 269 VEESETPIILFVDEM 283
>SPAC1093.06c |dhc1|SPAC30C2.01c|dynein heavy chain
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 4196
Score = 33.5 bits (73), Expect = 0.020
Identities = 13/26 (50%), Positives = 19/26 (73%)
Frame = +2
Query: 14 KFLKFGMQPSRGVLFYGPPGCGKTLL 91
+FL F + +R V+F GPPG GK++L
Sbjct: 2504 EFLNFSLTKNRCVIFCGPPGSGKSML 2529
>SPBC83.08 |||AAA family ATPase Rvb2 |Schizosaccharomyces pombe|chr
2|||Manual
Length = 465
Score = 33.1 bits (72), Expect = 0.027
Identities = 16/58 (27%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Frame = +2
Query: 14 KFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQAN--FISVKGPELLTMWFGESEA 181
K ++ G R +L GPP GKT +A +A ++ F+++ E+ ++ ++EA
Sbjct: 56 KMIQEGRIAGRAILMAGPPSTGKTAIAMGMAQSLGSDTPFVTLSASEVYSLEMSKTEA 113
>SPAC27E2.10c |rfc3|SPAPJ698.01c|DNA replication factor C complex
subunit Rfc3 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 342
Score = 31.1 bits (67), Expect = 0.11
Identities = 16/36 (44%), Positives = 20/36 (55%)
Frame = +2
Query: 5 TSDKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANE 112
T +KF+ P +LFYGPPG GKT A A +
Sbjct: 46 TLEKFISSNRVPH--MLFYGPPGTGKTSTILACARK 79
>SPBC4F6.17c |||mitochondrial matrix chaperone Hsp78
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 803
Score = 29.9 bits (64), Expect = 0.25
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = +2
Query: 35 QPSRGVLFYGPPGCGKTLLAKAIA 106
+P LF GP G GKT L KA+A
Sbjct: 530 RPLASFLFLGPTGVGKTALTKALA 553
>SPCC825.01 |||ribosome biogenesis ATPase, Arb family
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 822
Score = 29.5 bits (63), Expect = 0.33
Identities = 16/39 (41%), Positives = 19/39 (48%)
Frame = +2
Query: 20 LKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISV 136
L FG+ V GP G GKT L K I + Q + SV
Sbjct: 613 LNFGLDLKSRVALVGPNGAGKTTLIKLILEKVQPSTGSV 651
>SPAC22F3.06c |lon1||Lon protease homolog Lon1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1067
Score = 27.9 bits (59), Expect = 1.0
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +2
Query: 29 GMQPSRGVLFYGPPGCGKTLLAKAIANECQANF 127
G + + GPPG GKT + K+IA+ F
Sbjct: 567 GTMQGKIMCLVGPPGVGKTSVGKSIASALNREF 599
>SPAC14C4.13 |rad17||RFC related checkpoint protein
Rad17|Schizosaccharomyces pombe|chr 1|||Manual
Length = 606
Score = 27.9 bits (59), Expect = 1.0
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +2
Query: 41 SRGVLFYGPPGCGKTLLAKAIANECQANFISVKGP 145
SR +L GP GCGK+ + +A E + I P
Sbjct: 105 SRLLLICGPSGCGKSTAVQVLAKELGYSLIEWLNP 139
>SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase
Y|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1002
Score = 27.5 bits (58), Expect = 1.3
Identities = 12/55 (21%), Positives = 21/55 (38%)
Frame = +3
Query: 309 HQPDPHRDGRHGRQEERLHHRCHKQTGHHRPGHPASRPSGPPHLHPAADEKSREA 473
H P H +++ HH+ K HH+ GP H E++ ++
Sbjct: 382 HHKGPKDKEHHKGPKDKEHHKGPKDKEHHKGPKDKEHHQGPKEKHNERPEQNMQS 436
>SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 374
Score = 27.5 bits (58), Expect = 1.3
Identities = 15/31 (48%), Positives = 21/31 (67%)
Frame = +2
Query: 356 TSSSSVPQTDRTSSTRPSCVPAVWTTSSTSR 448
+SSSSVP T TSS+ S + ++SS+SR
Sbjct: 203 SSSSSVPITSSTSSSHSSSSSSSSSSSSSSR 233
Score = 25.8 bits (54), Expect = 4.1
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = -3
Query: 249 SSSSKNNTHGDADRALSKMSRTFASDSPNHMVSSSGPFTDIKLA*HSLAMAFAS 88
SSSS +++ + + S S + +S S + SSS P T + HS + + +S
Sbjct: 173 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSVPITSSTSSSHSSSSSSSS 226
>SPAC23D3.02 |rfc2||DNA replication factor C complex subunit
Rfc2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 340
Score = 27.1 bits (57), Expect = 1.8
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +2
Query: 50 VLFYGPPGCGKTLLAKAIANE 112
+LFYG PG GKT A++ E
Sbjct: 55 MLFYGSPGTGKTSTILALSRE 75
>SPBC23E6.07c |rfc1||DNA replication factor C complex subunit
Rfc1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 934
Score = 27.1 bits (57), Expect = 1.8
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +2
Query: 29 GMQPSRGVLFYGPPGCGKTLLAKAIA 106
G+ + VL GPPG GKT A +A
Sbjct: 405 GLGLYKAVLLSGPPGIGKTTAAHLVA 430
>SPBC1709.08 |cft1||cleavage factor one Cft1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1441
Score = 26.6 bits (56), Expect = 2.3
Identities = 13/38 (34%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = -3
Query: 474 WPRGTSRRQRDVDEVVQTA-GTQDGRVDDVRSVCGTDD 364
W R T+ + +DE T GT D +DD+ + TD+
Sbjct: 436 WSRRTTNEEVRLDEGDDTLYGTNDAEMDDMLDIYETDE 473
>SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual
Length = 4717
Score = 26.6 bits (56), Expect = 2.3
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +2
Query: 32 MQPSRGVLFYGPPGCGKTLLAKAIANE 112
+Q + +L G PG GKT L A+A E
Sbjct: 1556 LQVLKPILLEGSPGVGKTSLITALARE 1582
Score = 24.6 bits (51), Expect = 9.4
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +2
Query: 50 VLFYGPPGCGKTLLAKAIANEC 115
VL G GCGKT + + +A EC
Sbjct: 1189 VLLVGDTGCGKTTVCQILA-EC 1209
>SPAC4G9.12 |||gluconokinase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 193
Score = 26.2 bits (55), Expect = 3.1
Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = +2
Query: 35 QPSRGV-LFYGPPGCGKTLLAKAIANECQANFI 130
QP + V + GP G GKT +AKA++ + +I
Sbjct: 11 QPYKYVFVVIGPAGSGKTTMAKAVSEKLGFEYI 43
>SPCC737.07c |||DNA polymerase alpha-associated DNA helicase A
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 660
Score = 25.8 bits (54), Expect = 4.1
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = +2
Query: 14 KFLKFGMQPSRGVLFYGPPGCGKT 85
K +KF + L +GPPG GKT
Sbjct: 216 KAVKFSIAVKELSLIHGPPGTGKT 239
>SPBC115.02c |||AFG1 family mitochondrial ATPase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 454
Score = 25.8 bits (54), Expect = 4.1
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = +2
Query: 44 RGVLFYGPPGCGKTLL 91
+G+ YG GCGKT L
Sbjct: 119 KGIYLYGDVGCGKTAL 134
>SPBC947.06c |||spermidine family transporter |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 498
Score = 25.8 bits (54), Expect = 4.1
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = -1
Query: 146 LVPSLI*S*PDTRWRWPL 93
++ SL+ DT WRWPL
Sbjct: 199 IISSLVTEHSDTAWRWPL 216
>SPBC21D10.06c |map4||cell agglutination protein
Map4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 948
Score = 25.8 bits (54), Expect = 4.1
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = +2
Query: 353 RTSSSSVPQTDRTSSTRPSCVPAVWTTSSTS 445
++S+SSVP SS+ S P T+SSTS
Sbjct: 257 KSSTSSVPTQTIDSSSFTSSTPVSLTSSSTS 287
>SPAC30D11.09 |cwf19||complexed with Cdc5 protein Cwf19
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 639
Score = 25.8 bits (54), Expect = 4.1
Identities = 14/41 (34%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Frame = +3
Query: 327 RDGRHGRQEERLH--HRCHKQTGHHRPGHPASRPSGPPHLH 443
R+ H R+ H HR K H R P+SR +G H
Sbjct: 20 RETNHSRRHRHHHSRHRESKHGRHDRSERPSSREAGDRSRH 60
>SPCC1450.02 ||SPCC191.13|bromodomain protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 578
Score = 25.4 bits (53), Expect = 5.4
Identities = 12/53 (22%), Positives = 26/53 (49%)
Frame = +2
Query: 350 RRTSSSSVPQTDRTSSTRPSCVPAVWTTSSTSRCRREVPRGHPARQPSQIDYR 508
++++S++ P+T R SS + +T+ + +P G P R+ + R
Sbjct: 206 QKSASTAPPRTRRNSSVSSTSASVAASTAPKAASPAVLPEGKPRRRKNNSQMR 258
>SPAC186.09 |||pyruvate decarboxylase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 572
Score = 25.4 bits (53), Expect = 5.4
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = +1
Query: 376 TNRPDIIDPAILRPGRLDHLIYIPLPTRSPARPSCAPTFANRLSQ 510
T P +ID AI +YI +PT ++P AP A+ +++
Sbjct: 153 TEAPRLIDYAIKMALLKKKPVYIEVPTNVASQPCAAPGPASLITE 197
>SPBC31E1.06 |bms1|SPBC800.01|GTP binding protein
Bms1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1121
Score = 25.4 bits (53), Expect = 5.4
Identities = 13/33 (39%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
Frame = +2
Query: 50 VLFYGPPGCGKTLLAKAIANECQANFIS-VKGP 145
V GPPG GK+ L K++ IS + GP
Sbjct: 77 VAVMGPPGTGKSTLIKSLVRRYSKYTISQITGP 109
>SPBC776.12c |hsk1||serine/threonine protein kinase
Hsk1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 507
Score = 25.4 bits (53), Expect = 5.4
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = -3
Query: 471 PRGTSRRQRDVDEVVQTAGTQDG 403
P S+R+R +DE++ QDG
Sbjct: 484 PTSLSKRKRSIDEILPNDALQDG 506
>SPCC830.11c |||adenylate kinase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 175
Score = 25.0 bits (52), Expect = 7.1
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = +2
Query: 50 VLFYGPPGCGKTLLAKAIANECQANFISV 136
++ G PG GKT LA+ +A + I +
Sbjct: 11 IIICGTPGTGKTTLAEQVAETTELENICI 39
>SPCC1235.01 ||SPCC320.02c|sequence orphan|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 658
Score = 25.0 bits (52), Expect = 7.1
Identities = 17/62 (27%), Positives = 26/62 (41%), Gaps = 2/62 (3%)
Frame = -1
Query: 395 MMSGLFVAPMMKTFFLAPMPSISVRIWLMTRSAAPPASDTEP--PRDFAWSPARRRTTRT 222
M+ + PM++T + PM + I LM + P +T P +P TT T
Sbjct: 111 MVETTTITPMVETTTITPM--VEAMITLMEETMTTPMEETTTILPMAAMTTPMEETTTTT 168
Query: 221 EM 216
M
Sbjct: 169 PM 170
>SPBC1685.15c |klp6|sot2, SPBC649.01c|kinesin-like protein
Klp6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 784
Score = 25.0 bits (52), Expect = 7.1
Identities = 12/29 (41%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
Frame = +2
Query: 2 GTSDKFLKFGMQPSRGVLF-YGPPGCGKT 85
GT++ L +Q +F YG GCGKT
Sbjct: 113 GTTEPLLDSVLQGYNATVFAYGATGCGKT 141
>SPCC1020.02 |spc7||kinetochore protein Spc7|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1364
Score = 25.0 bits (52), Expect = 7.1
Identities = 15/32 (46%), Positives = 20/32 (62%), Gaps = 3/32 (9%)
Frame = -3
Query: 219 DADRALSKMS---RTFASDSPNHMVSSSGPFT 133
D++++ S S RTFASD+ NH S GP T
Sbjct: 131 DSEKSTSNHSTPERTFASDAKNH--SPKGPTT 160
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,122,266
Number of Sequences: 5004
Number of extensions: 41263
Number of successful extensions: 277
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 208
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 269
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 220420454
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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