Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20442
(684 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation fact... 167 8e-42
U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation fact... 166 1e-41
U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation fact... 166 1e-41
U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation fact... 144 7e-35
U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation fact... 140 8e-34
Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical pr... 115 3e-26
Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical pr... 115 3e-26
Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical pr... 101 4e-22
U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation f... 73 2e-13
AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial... 73 2e-13
D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation fact... 69 3e-12
D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation fact... 69 3e-12
AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongatio... 69 3e-12
Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical p... 38 0.005
Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical pr... 36 0.027
L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical pr... 36 0.036
AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical ... 34 0.082
Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical pr... 33 0.19
Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical pr... 33 0.25
M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation fact... 33 0.25
U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation fact... 31 0.58
M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein. 31 0.58
L40996-1|AAA86431.1| 593|Caenorhabditis elegans GTP-binding pro... 31 0.77
AF125969-2|AAD14761.1| 613|Caenorhabditis elegans Caenorhabditi... 31 0.77
AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical ... 31 1.0
AC024817-55|AAF59563.3| 366|Caenorhabditis elegans Hypothetical... 30 1.3
DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic tr... 30 1.8
AF022984-10|AAB69958.1| 358|Caenorhabditis elegans Hypothetical... 30 1.8
Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical pr... 29 2.3
Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical pr... 29 2.3
AL008869-2|CAC42315.1| 810|Caenorhabditis elegans Hypothetical ... 29 2.3
AL008869-1|CAA15516.1| 808|Caenorhabditis elegans Hypothetical ... 29 2.3
AB032749-1|BAA92158.1| 810|Caenorhabditis elegans EAT-20B protein. 29 2.3
AB032748-1|BAA92157.1| 808|Caenorhabditis elegans EAT-20A protein. 29 2.3
Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical pr... 29 4.1
Z66513-12|CAI46602.1| 492|Caenorhabditis elegans Hypothetical p... 29 4.1
Z66513-11|CAA91332.3| 427|Caenorhabditis elegans Hypothetical p... 29 4.1
Z47808-7|CAA87771.2| 934|Caenorhabditis elegans Hypothetical pr... 29 4.1
Z75710-2|CAB00025.2| 381|Caenorhabditis elegans Hypothetical pr... 28 7.1
AF040643-5|AAT81201.1| 299|Caenorhabditis elegans Hypothetical ... 27 9.4
>U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation factor
protein 4, isoformc protein.
Length = 267
Score = 167 bits (405), Expect = 8e-42
Identities = 97/166 (58%), Positives = 110/166 (66%)
Frame = +2
Query: 158 QTYHREVREGGPGNG*RILQICLGIGQTKG*A*RGITIDIALWKFETSKYYVTIIDAPGH 337
+ + +E +E G G+ + + + K RGITIDIALWKFET+KYY+TIIDAPGH
Sbjct: 40 EKFEKEAQEMGKGS----FKYAWVLDKLKAERERGITIDIALWKFETAKYYITIIDAPGH 95
Query: 338 RDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVTKW 517
RDFIKNMITGTSQADCAVL+VA GTGEFEAGISKNGQTREHALLA TLGVKQL
Sbjct: 96 RDFIKNMITGTSQADCAVLVVACGTGEFEAGISKNGQTREHALLAQTLGVKQL------- 148
Query: 518 IPLNHHTVSPDLRKSRRKYPHTSRRLATTQLLSLSCPFLDGTETTC 655
+ L T SPD +SRR T Q L D TETTC
Sbjct: 149 VSLRSPTRSPD----------SSRRSDTIQRLFHLSQSPDSTETTC 184
Score = 144 bits (348), Expect = 7e-35
Identities = 66/67 (98%), Positives = 66/67 (98%)
Frame = +3
Query: 54 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 233
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 234 DKLKAER 254
DKLKAER
Sbjct: 61 DKLKAER 67
>U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation factor
protein 4, isoforma protein.
Length = 463
Score = 166 bits (404), Expect = 1e-41
Identities = 83/119 (69%), Positives = 94/119 (78%)
Frame = +2
Query: 158 QTYHREVREGGPGNG*RILQICLGIGQTKG*A*RGITIDIALWKFETSKYYVTIIDAPGH 337
+ + +E +E G G+ + + + K RGITIDIALWKFET+KYY+TIIDAPGH
Sbjct: 40 EKFEKEAQEMGKGS----FKYAWVLDKLKAERERGITIDIALWKFETAKYYITIIDAPGH 95
Query: 338 RDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVTK 514
RDFIKNMITGTSQADCAVL+VA GTGEFEAGISKNGQTREHALLA TLGVKQLIV K
Sbjct: 96 RDFIKNMITGTSQADCAVLVVACGTGEFEAGISKNGQTREHALLAQTLGVKQLIVACNK 154
Score = 144 bits (348), Expect = 7e-35
Identities = 66/67 (98%), Positives = 66/67 (98%)
Frame = +3
Query: 54 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 233
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 234 DKLKAER 254
DKLKAER
Sbjct: 61 DKLKAER 67
Score = 91.5 bits (217), Expect = 5e-19
Identities = 41/55 (74%), Positives = 46/55 (83%)
Frame = +1
Query: 508 NKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLELQQN 672
NKMDSTEPP+SE RF EI EVS +IKKIGYNP AV FVPISG++GDNMLE+ N
Sbjct: 153 NKMDSTEPPFSEARFTEITNEVSGFIKKIGYNPKAVPFVPISGFNGDNMLEVSSN 207
>U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation factor
protein 3 protein.
Length = 463
Score = 166 bits (404), Expect = 1e-41
Identities = 83/119 (69%), Positives = 94/119 (78%)
Frame = +2
Query: 158 QTYHREVREGGPGNG*RILQICLGIGQTKG*A*RGITIDIALWKFETSKYYVTIIDAPGH 337
+ + +E +E G G+ + + + K RGITIDIALWKFET+KYY+TIIDAPGH
Sbjct: 40 EKFEKEAQEMGKGS----FKYAWVLDKLKAERERGITIDIALWKFETAKYYITIIDAPGH 95
Query: 338 RDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVTK 514
RDFIKNMITGTSQADCAVL+VA GTGEFEAGISKNGQTREHALLA TLGVKQLIV K
Sbjct: 96 RDFIKNMITGTSQADCAVLVVACGTGEFEAGISKNGQTREHALLAQTLGVKQLIVACNK 154
Score = 144 bits (348), Expect = 7e-35
Identities = 66/67 (98%), Positives = 66/67 (98%)
Frame = +3
Query: 54 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 233
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 234 DKLKAER 254
DKLKAER
Sbjct: 61 DKLKAER 67
Score = 91.5 bits (217), Expect = 5e-19
Identities = 41/55 (74%), Positives = 46/55 (83%)
Frame = +1
Query: 508 NKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLELQQN 672
NKMDSTEPP+SE RF EI EVS +IKKIGYNP AV FVPISG++GDNMLE+ N
Sbjct: 153 NKMDSTEPPFSEARFTEITNEVSGFIKKIGYNPKAVPFVPISGFNGDNMLEVSSN 207
>U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation factor
protein 4, isoformd protein.
Length = 429
Score = 144 bits (348), Expect = 7e-35
Identities = 66/67 (98%), Positives = 66/67 (98%)
Frame = +3
Query: 54 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 233
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 234 DKLKAER 254
DKLKAER
Sbjct: 61 DKLKAER 67
Score = 104 bits (250), Expect = 5e-23
Identities = 51/82 (62%), Positives = 62/82 (75%)
Frame = +2
Query: 158 QTYHREVREGGPGNG*RILQICLGIGQTKG*A*RGITIDIALWKFETSKYYVTIIDAPGH 337
+ + +E +E G G+ + + + K RGITIDIALWKFET+KYY+TIIDAPGH
Sbjct: 40 EKFEKEAQEMGKGS----FKYAWVLDKLKAERERGITIDIALWKFETAKYYITIIDAPGH 95
Query: 338 RDFIKNMITGTSQADCAVLIVA 403
RDFIKNMITGTSQADCAVL+VA
Sbjct: 96 RDFIKNMITGTSQADCAVLVVA 117
Score = 91.5 bits (217), Expect = 5e-19
Identities = 41/55 (74%), Positives = 46/55 (83%)
Frame = +1
Query: 508 NKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLELQQN 672
NKMDSTEPP+SE RF EI EVS +IKKIGYNP AV FVPISG++GDNMLE+ N
Sbjct: 119 NKMDSTEPPFSEARFTEITNEVSGFIKKIGYNPKAVPFVPISGFNGDNMLEVSSN 173
>U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation factor
protein 4, isoformb protein.
Length = 77
Score = 140 bits (339), Expect = 8e-34
Identities = 64/68 (94%), Positives = 65/68 (95%)
Frame = +3
Query: 54 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 233
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 234 DKLKAERS 257
DKLK +S
Sbjct: 61 DKLKVTKS 68
>Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical
protein K07A12.4b protein.
Length = 592
Score = 115 bits (277), Expect = 3e-26
Identities = 54/86 (62%), Positives = 64/86 (74%)
Frame = +2
Query: 257 RGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGIS 436
RG+T+DI FETS + ++DAPGH+DFI NMITGTSQAD A+L+V A TGEFE G
Sbjct: 232 RGVTMDIGRTSFETSHRRIVLLDAPGHKDFISNMITGTSQADAAILVVNATTGEFETGFE 291
Query: 437 KNGQTREHALLAFTLGVKQLIVGVTK 514
GQT+EHALL +LGV QLIV V K
Sbjct: 292 NGGQTKEHALLLRSLGVTQLIVAVNK 317
Score = 81.0 bits (191), Expect = 7e-16
Identities = 35/64 (54%), Positives = 47/64 (73%)
Frame = +3
Query: 63 EKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKL 242
+K IN++V+GHVD+GKST GHL++ +D RTI+KF+ EA GK SF YAWVLD+
Sbjct: 167 DKDLINLIVVGHVDAGKSTLMGHLLHDLEVVDSRTIDKFKHEAARNGKASFAYAWVLDET 226
Query: 243 KAER 254
+ ER
Sbjct: 227 EEER 230
Score = 37.9 bits (84), Expect = 0.007
Identities = 18/52 (34%), Positives = 37/52 (71%), Gaps = 1/52 (1%)
Frame = +1
Query: 508 NKMDSTEPPYSEPRFEEIKKEVSSYI-KKIGYNPAAVAFVPISGWHGDNMLE 660
NK+D+ + +S+ RF+EIK +S ++ ++ G++ FVP+SG+ G+N+++
Sbjct: 316 NKLDTVD--WSQDRFDEIKNNLSVFLTRQAGFSKPK--FVPVSGFTGENLIK 363
>Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical
protein K07A12.4a protein.
Length = 610
Score = 115 bits (277), Expect = 3e-26
Identities = 54/86 (62%), Positives = 64/86 (74%)
Frame = +2
Query: 257 RGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGIS 436
RG+T+DI FETS + ++DAPGH+DFI NMITGTSQAD A+L+V A TGEFE G
Sbjct: 250 RGVTMDIGRTSFETSHRRIVLLDAPGHKDFISNMITGTSQADAAILVVNATTGEFETGFE 309
Query: 437 KNGQTREHALLAFTLGVKQLIVGVTK 514
GQT+EHALL +LGV QLIV V K
Sbjct: 310 NGGQTKEHALLLRSLGVTQLIVAVNK 335
Score = 81.0 bits (191), Expect = 7e-16
Identities = 35/64 (54%), Positives = 47/64 (73%)
Frame = +3
Query: 63 EKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKL 242
+K IN++V+GHVD+GKST GHL++ +D RTI+KF+ EA GK SF YAWVLD+
Sbjct: 185 DKDLINLIVVGHVDAGKSTLMGHLLHDLEVVDSRTIDKFKHEAARNGKASFAYAWVLDET 244
Query: 243 KAER 254
+ ER
Sbjct: 245 EEER 248
Score = 37.9 bits (84), Expect = 0.007
Identities = 18/52 (34%), Positives = 37/52 (71%), Gaps = 1/52 (1%)
Frame = +1
Query: 508 NKMDSTEPPYSEPRFEEIKKEVSSYI-KKIGYNPAAVAFVPISGWHGDNMLE 660
NK+D+ + +S+ RF+EIK +S ++ ++ G++ FVP+SG+ G+N+++
Sbjct: 334 NKLDTVD--WSQDRFDEIKNNLSVFLTRQAGFSKPK--FVPVSGFTGENLIK 381
>Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical
protein H19N07.1 protein.
Length = 532
Score = 101 bits (243), Expect = 4e-22
Identities = 51/119 (42%), Positives = 73/119 (61%)
Frame = +2
Query: 158 QTYHREVREGGPGNG*RILQICLGIGQTKG*A*RGITIDIALWKFETSKYYVTIIDAPGH 337
+ Y RE +E G + L C+ + +G T+++ FET K + TI+DAPGH
Sbjct: 142 EKYEREAKEKGRESW--YLSWCMDTNDEE--REKGKTVEVGRAYFETEKRHFTILDAPGH 197
Query: 338 RDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVTK 514
+ F+ NMI G +QAD AVL+++A GEFE G + GQTREH++L T GVK L++ V K
Sbjct: 198 KSFVPNMIVGANQADLAVLVISARRGEFETGFDRGGQTREHSMLVKTAGVKHLVILVNK 256
Score = 77.0 bits (181), Expect = 1e-14
Identities = 33/66 (50%), Positives = 47/66 (71%)
Frame = +3
Query: 57 GKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLD 236
G K HIN+V +GHVD+GKST G L++ G +DKRT+EK+E+EA+E G+ S+ +W +D
Sbjct: 104 GTHKEHINMVFVGHVDAGKSTIGGQLMFLTGMVDKRTLEKYEREAKEKGRESWYLSWCMD 163
Query: 237 KLKAER 254
ER
Sbjct: 164 TNDEER 169
Score = 43.2 bits (97), Expect = 2e-04
Identities = 18/47 (38%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Frame = +1
Query: 508 NKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAA-VAFVPISGWHG 645
NKMD + E RF+EI+ +++ +++K+G+NP + +VP SG G
Sbjct: 255 NKMDDPTVKWEEERFKEIEGKLTPFLRKLGFNPKTDITYVPCSGLTG 301
>U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 2 protein.
Length = 439
Score = 72.9 bits (171), Expect = 2e-13
Identities = 40/86 (46%), Positives = 53/86 (61%)
Frame = +2
Query: 257 RGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGIS 436
RGITI++A +E+ + D PGH DFIKNMI GTSQ D AVL++AA G E
Sbjct: 92 RGITINVAHIGYESPLRRYSHTDCPGHSDFIKNMICGTSQMDVAVLVIAATDGVME---- 147
Query: 437 KNGQTREHALLAFTLGVKQLIVGVTK 514
QT+EH +LA +GVK + + + K
Sbjct: 148 ---QTKEHLILAKQVGVKNMAIFINK 170
Score = 28.7 bits (61), Expect = 4.1
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +3
Query: 66 KTHINIVVIGHVDSGKSTTT 125
K ++N+ IGH+D GK+T T
Sbjct: 43 KINVNVGTIGHIDHGKTTLT 62
>AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial
elongation factorTu homologue protein.
Length = 439
Score = 72.9 bits (171), Expect = 2e-13
Identities = 40/86 (46%), Positives = 53/86 (61%)
Frame = +2
Query: 257 RGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGIS 436
RGITI++A +E+ + D PGH DFIKNMI GTSQ D AVL++AA G E
Sbjct: 92 RGITINVAHIGYESPLRRYSHTDCPGHSDFIKNMICGTSQMDVAVLVIAATDGVME---- 147
Query: 437 KNGQTREHALLAFTLGVKQLIVGVTK 514
QT+EH +LA +GVK + + + K
Sbjct: 148 ---QTKEHLILAKQVGVKNMAIFINK 170
Score = 28.7 bits (61), Expect = 4.1
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +3
Query: 66 KTHINIVVIGHVDSGKSTTT 125
K ++N+ IGH+D GK+T T
Sbjct: 43 KINVNVGTIGHIDHGKTTLT 62
>D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 495
Score = 68.9 bits (161), Expect = 3e-12
Identities = 38/77 (49%), Positives = 49/77 (63%)
Frame = +2
Query: 257 RGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGIS 436
RGITI+ ++ET+K + ID PGH D+IKNMITG +Q + A+L+VAA G
Sbjct: 96 RGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAATDGPMP---- 151
Query: 437 KNGQTREHALLAFTLGV 487
QTREH LLA +GV
Sbjct: 152 ---QTREHLLLARQVGV 165
Score = 36.3 bits (80), Expect = 0.020
Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 3/68 (4%)
Frame = +3
Query: 60 KEKTHINIVVIGHVDSGKSTTTG---HLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWV 230
++K H+N+ IGHVD GK+T T ++ G R E + +E +G A+
Sbjct: 45 RDKPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYEDIDNAPEEKARGITINAFH 104
Query: 231 LDKLKAER 254
L+ A+R
Sbjct: 105 LEYETAKR 112
>D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 496
Score = 68.9 bits (161), Expect = 3e-12
Identities = 38/77 (49%), Positives = 49/77 (63%)
Frame = +2
Query: 257 RGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGIS 436
RGITI+ ++ET+K + ID PGH D+IKNMITG +Q + A+L+VAA G
Sbjct: 97 RGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAATDGPMP---- 152
Query: 437 KNGQTREHALLAFTLGV 487
QTREH LLA +GV
Sbjct: 153 ---QTREHLLLARQVGV 166
Score = 36.3 bits (80), Expect = 0.020
Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 3/68 (4%)
Frame = +3
Query: 60 KEKTHINIVVIGHVDSGKSTTTG---HLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWV 230
++K H+N+ IGHVD GK+T T ++ G R E + +E +G A+
Sbjct: 46 RDKPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYEDIDNAPEEKARGITINAFH 105
Query: 231 LDKLKAER 254
L+ A+R
Sbjct: 106 LEYETAKR 113
>AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 1 protein.
Length = 496
Score = 68.9 bits (161), Expect = 3e-12
Identities = 38/77 (49%), Positives = 49/77 (63%)
Frame = +2
Query: 257 RGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGIS 436
RGITI+ ++ET+K + ID PGH D+IKNMITG +Q + A+L+VAA G
Sbjct: 97 RGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAATDGPMP---- 152
Query: 437 KNGQTREHALLAFTLGV 487
QTREH LLA +GV
Sbjct: 153 ---QTREHLLLARQVGV 166
Score = 36.3 bits (80), Expect = 0.020
Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 3/68 (4%)
Frame = +3
Query: 60 KEKTHINIVVIGHVDSGKSTTTG---HLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWV 230
++K H+N+ IGHVD GK+T T ++ G R E + +E +G A+
Sbjct: 46 RDKPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYEDIDNAPEEKARGITINAFH 105
Query: 231 LDKLKAER 254
L+ A+R
Sbjct: 106 LEYETAKR 113
>Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical
protein F46B6.6a protein.
Length = 702
Score = 38.3 bits (85), Expect = 0.005
Identities = 32/86 (37%), Positives = 38/86 (44%), Gaps = 1/86 (1%)
Frame = +2
Query: 260 GITIDIALWKFETSK-YYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGIS 436
GIT I + E +K VT +D PGH F G AD VL+VAA G E
Sbjct: 188 GITQHIGAFSVELTKGRRVTFLDTPGHAAFASMRARGAKGADIVVLVVAADDGVKE---- 243
Query: 437 KNGQTREHALLAFTLGVKQLIVGVTK 514
QT + A V QL+V V K
Sbjct: 244 ---QTAQSIKFAKDANV-QLVVAVNK 265
>Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical
protein C47B2.7b protein.
Length = 500
Score = 35.9 bits (79), Expect = 0.027
Identities = 24/86 (27%), Positives = 42/86 (48%)
Frame = +2
Query: 311 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVK 490
+ +ID PGH I+ ++ ++ D A++I+ + AGI QT EH LLA
Sbjct: 74 LALIDCPGHSGLIRAVLAASTVFDMAIVII-----DVVAGIQP--QTAEHLLLASKFCPN 126
Query: 491 QLIVGVTKWIPLNHHTVSPDLRKSRR 568
++I+ + K +S +K R+
Sbjct: 127 RVIIVLNKCDLAEKSKISESAKKVRK 152
Score = 28.7 bits (61), Expect = 4.1
Identities = 10/17 (58%), Positives = 15/17 (88%)
Frame = +3
Query: 75 INIVVIGHVDSGKSTTT 125
+N+ ++GHVDSGK+T T
Sbjct: 14 LNLGILGHVDSGKTTLT 30
>L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical
protein ZK1236.1 protein.
Length = 645
Score = 35.5 bits (78), Expect = 0.036
Identities = 18/53 (33%), Positives = 25/53 (47%)
Frame = +2
Query: 257 RGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 415
RGIT+ Y + +ID PGH DF + + D +L+VAA G
Sbjct: 86 RGITVKAQTAALRHRGYLLNLIDTPGHVDFSAEVSRSLAVCDGILLLVAANQG 138
Score = 32.3 bits (70), Expect = 0.33
Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Frame = +3
Query: 78 NIVVIGHVDSGKSTTTGHLIYKCGGI---DKRTIEKFEKEAQ 194
N ++ HVD GKST L+ CG + K+ ++K + E +
Sbjct: 44 NFGIVAHVDHGKSTLADRLLEMCGAVPPGQKQMLDKLQVERE 85
>AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical
protein Y119D3B.14 protein.
Length = 689
Score = 34.3 bits (75), Expect = 0.082
Identities = 15/26 (57%), Positives = 18/26 (69%)
Frame = +3
Query: 78 NIVVIGHVDSGKSTTTGHLIYKCGGI 155
NI VI HVD+GK+T T L+Y G I
Sbjct: 27 NIGVIAHVDAGKTTVTERLLYLAGAI 52
Score = 30.7 bits (66), Expect = 1.0
Identities = 15/53 (28%), Positives = 24/53 (45%)
Frame = +2
Query: 257 RGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 415
RGIT+ A + + + +ID PGH DF + D V+++ G
Sbjct: 74 RGITVQSAAVNLDWKGHRINLIDTPGHVDFRVEVERCVRVLDGIVVVIDGSAG 126
>Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical
protein F29C12.4 protein.
Length = 750
Score = 33.1 bits (72), Expect = 0.19
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +3
Query: 78 NIVVIGHVDSGKSTTTGHLIYKCGGID 158
NI + H+DSGK+T T ++Y G ID
Sbjct: 46 NIGISAHIDSGKTTVTERILYYAGRID 72
Score = 31.9 bits (69), Expect = 0.44
Identities = 20/53 (37%), Positives = 25/53 (47%)
Frame = +2
Query: 257 RGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 415
RGITI A + + IID PGH DF + D AVL++ G G
Sbjct: 96 RGITIQSAATYVDWHGTNINIIDTPGHVDFTVEVERALRVLDGAVLVL-CGVG 147
>Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical
protein F25H5.4 protein.
Length = 852
Score = 32.7 bits (71), Expect = 0.25
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = +3
Query: 54 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCG 149
M +++ N+ VI HVD GKST T L+ K G
Sbjct: 13 MDRKRNIRNMSVIAHVDHGKSTLTDSLVSKAG 44
Score = 29.9 bits (64), Expect = 1.8
Identities = 13/50 (26%), Positives = 27/50 (54%)
Frame = +2
Query: 266 TIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 415
T+++ K + + + + +ID+PGH DF + D A+++V +G
Sbjct: 97 TVEVDGKKEKYNGFLINLIDSPGHVDFSSEVTAALRVTDGALVVVDCVSG 146
>M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation factor
protein.
Length = 852
Score = 32.7 bits (71), Expect = 0.25
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = +3
Query: 54 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCG 149
M +++ N+ VI HVD GKST T L+ K G
Sbjct: 13 MDRKRNIRNMSVIAHVDHGKSTLTDSLVSKAG 44
Score = 30.3 bits (65), Expect = 1.3
Identities = 13/50 (26%), Positives = 27/50 (54%)
Frame = +2
Query: 266 TIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 415
T+++ K + + + + +ID+PGH DF + D A+++V +G
Sbjct: 97 TVEVDGKKEKYNGFLINLIDSPGHVDFSSEVTAALGVTDGALVVVDCVSG 146
>U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation factor
protein 1 protein.
Length = 974
Score = 31.5 bits (68), Expect = 0.58
Identities = 19/64 (29%), Positives = 29/64 (45%)
Frame = +2
Query: 224 LGIGQTKG*A*RGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVA 403
L I + +G + + + I + Y + IID PGH +F M AD V++V
Sbjct: 174 LFIEKQRGCSIKSQPVSIVAQDSRSKSYLLNIIDTPGHVNFSDEMTASYRLADGVVVMVD 233
Query: 404 AGTG 415
A G
Sbjct: 234 AHEG 237
>M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein.
Length = 849
Score = 31.5 bits (68), Expect = 0.58
Identities = 19/64 (29%), Positives = 29/64 (45%)
Frame = +2
Query: 224 LGIGQTKG*A*RGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVA 403
L I + +G + + + I + Y + IID PGH +F M AD V++V
Sbjct: 49 LFIEKQRGCSIKSQPVSIVAQDSRSKSYLLNIIDTPGHVNFSDEMTASYRLADGVVVMVD 108
Query: 404 AGTG 415
A G
Sbjct: 109 AHEG 112
>L40996-1|AAA86431.1| 593|Caenorhabditis elegans GTP-binding
protein protein.
Length = 593
Score = 31.1 bits (67), Expect = 0.77
Identities = 15/37 (40%), Positives = 23/37 (62%)
Frame = +3
Query: 30 FVIRD*PKMGKEKTHINIVVIGHVDSGKSTTTGHLIY 140
++IRD P K+ + V+G+VD+GKST G L +
Sbjct: 127 WIIRD-PPTEKDFIEARVAVVGNVDAGKSTLLGVLTH 162
>AF125969-2|AAD14761.1| 613|Caenorhabditis elegans Caenorhabditis
gtp-binding proteinprotein 1 protein.
Length = 613
Score = 31.1 bits (67), Expect = 0.77
Identities = 15/37 (40%), Positives = 23/37 (62%)
Frame = +3
Query: 30 FVIRD*PKMGKEKTHINIVVIGHVDSGKSTTTGHLIY 140
++IRD P K+ + V+G+VD+GKST G L +
Sbjct: 127 WIIRD-PPTEKDFIEARVAVVGNVDAGKSTLLGVLTH 162
>AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical
protein Y39G10AR.8 protein.
Length = 469
Score = 30.7 bits (66), Expect = 1.0
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +2
Query: 308 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVA 403
+V+ +D PGH + M+ G + D A L+VA
Sbjct: 128 HVSFVDCPGHDILMATMLNGAAVMDAAFLLVA 159
>AC024817-55|AAF59563.3| 366|Caenorhabditis elegans Hypothetical
protein Y54G2A.28 protein.
Length = 366
Score = 30.3 bits (65), Expect = 1.3
Identities = 16/45 (35%), Positives = 24/45 (53%)
Frame = -1
Query: 519 IHFVTPTMSCLTPRVKASKACSRV*PFLEIPASNSPVPAATMSTA 385
++ PT+SC+ + AS S P + PA N VP AT+S +
Sbjct: 11 LNLFDPTLSCMATQNSASATLSCANPTVAAPA-NDDVPEATLSVS 54
>DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic
translation initiationfactor eIF5B protein.
Length = 1074
Score = 29.9 bits (64), Expect = 1.8
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +2
Query: 317 IIDAPGHRDFIKNMITGTSQADCAVLIV 400
IID PGH F G+S D A+L+V
Sbjct: 553 IIDTPGHESFSNLRTRGSSLCDFAILVV 580
>AF022984-10|AAB69958.1| 358|Caenorhabditis elegans Hypothetical
protein ZK488.1 protein.
Length = 358
Score = 29.9 bits (64), Expect = 1.8
Identities = 33/123 (26%), Positives = 54/123 (43%)
Frame = +2
Query: 281 LWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREH 460
++KFE+S + +T + K ITGT VL+V+ +F K+ Q
Sbjct: 104 VYKFESSLHRLTFGLTKSRTEDYKTKITGTLGKLQIVLVVSEAFWKFLNKRYKSAQIFFA 163
Query: 461 ALLAFTLGVKQLIVGVTKWIPLNHHTVSPDLRKSRRKYPHTSRRLATTQLLSLSCPFLDG 640
F L + + I + W L+ H+ + RKS YP+ A TQ++S +D
Sbjct: 164 FFPNFQLKILECIWHI--WATLDRHSATAVYRKS---YPNA----APTQIVSRRGVLMDL 214
Query: 641 TET 649
+T
Sbjct: 215 AKT 217
>Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical
protein K10C3.5b protein.
Length = 705
Score = 29.5 bits (63), Expect = 2.3
Identities = 14/48 (29%), Positives = 25/48 (52%)
Frame = +2
Query: 257 RGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 400
RGIT+ + + +ID+PGH DF + + +D A+L++
Sbjct: 67 RGITMKSSGISLLCEPLLINLIDSPGHVDFSGEVTSALILSDIALLLI 114
>Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical
protein K10C3.5a protein.
Length = 894
Score = 29.5 bits (63), Expect = 2.3
Identities = 14/48 (29%), Positives = 25/48 (52%)
Frame = +2
Query: 257 RGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 400
RGIT+ + + +ID+PGH DF + + +D A+L++
Sbjct: 67 RGITMKSSGISLLCEPLLINLIDSPGHVDFSGEVTSALILSDIALLLI 114
>AL008869-2|CAC42315.1| 810|Caenorhabditis elegans Hypothetical
protein H30A04.1b protein.
Length = 810
Score = 29.5 bits (63), Expect = 2.3
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +2
Query: 575 PHTSRRLATTQLLSLSCPFLD 637
PH SR T L+ SCPFLD
Sbjct: 158 PHLSRNSFTANALNCSCPFLD 178
>AL008869-1|CAA15516.1| 808|Caenorhabditis elegans Hypothetical
protein H30A04.1a protein.
Length = 808
Score = 29.5 bits (63), Expect = 2.3
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +2
Query: 575 PHTSRRLATTQLLSLSCPFLD 637
PH SR T L+ SCPFLD
Sbjct: 158 PHLSRNSFTANALNCSCPFLD 178
>AB032749-1|BAA92158.1| 810|Caenorhabditis elegans EAT-20B protein.
Length = 810
Score = 29.5 bits (63), Expect = 2.3
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +2
Query: 575 PHTSRRLATTQLLSLSCPFLD 637
PH SR T L+ SCPFLD
Sbjct: 158 PHLSRNSFTANALNCSCPFLD 178
>AB032748-1|BAA92157.1| 808|Caenorhabditis elegans EAT-20A protein.
Length = 808
Score = 29.5 bits (63), Expect = 2.3
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +2
Query: 575 PHTSRRLATTQLLSLSCPFLD 637
PH SR T L+ SCPFLD
Sbjct: 158 PHLSRNSFTANALNCSCPFLD 178
>Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical
protein C47B2.7a protein.
Length = 459
Score = 28.7 bits (61), Expect = 4.1
Identities = 10/17 (58%), Positives = 15/17 (88%)
Frame = +3
Query: 75 INIVVIGHVDSGKSTTT 125
+N+ ++GHVDSGK+T T
Sbjct: 14 LNLGILGHVDSGKTTLT 30
>Z66513-12|CAI46602.1| 492|Caenorhabditis elegans Hypothetical
protein F54D5.5b protein.
Length = 492
Score = 28.7 bits (61), Expect = 4.1
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +3
Query: 156 DKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAER 254
+KR ++ EKE + F Y LDK+K ER
Sbjct: 272 EKRKLKDMEKECNDAKNAMFHYMNQLDKVKKER 304
>Z66513-11|CAA91332.3| 427|Caenorhabditis elegans Hypothetical
protein F54D5.5a protein.
Length = 427
Score = 28.7 bits (61), Expect = 4.1
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +3
Query: 156 DKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAER 254
+KR ++ EKE + F Y LDK+K ER
Sbjct: 207 EKRKLKDMEKECNDAKNAMFHYMNQLDKVKKER 239
>Z47808-7|CAA87771.2| 934|Caenorhabditis elegans Hypothetical
protein D2013.5 protein.
Length = 934
Score = 28.7 bits (61), Expect = 4.1
Identities = 14/38 (36%), Positives = 23/38 (60%)
Frame = +3
Query: 171 EKFEKEAQEMGKGSFKYAWVLDKLKAERSVVSQSILLS 284
E+ +K +EM K +Y L++L+ E V+ Q +LLS
Sbjct: 211 ERIQKLQEEMLKTQSQYQRELERLEKENKVLKQRLLLS 248
>Z75710-2|CAB00025.2| 381|Caenorhabditis elegans Hypothetical
protein D1081.4 protein.
Length = 381
Score = 27.9 bits (59), Expect = 7.1
Identities = 17/34 (50%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Frame = +2
Query: 311 VTIIDAPGHRDFI--KNMITGTSQADCAVLIVAA 406
V IID+ G RDFI KN+ GT AD +++ AA
Sbjct: 73 VQIIDSSGSRDFIGMKNLYIGT--ADAFLVVFAA 104
>AF040643-5|AAT81201.1| 299|Caenorhabditis elegans Hypothetical
protein F14D2.15 protein.
Length = 299
Score = 27.5 bits (58), Expect = 9.4
Identities = 21/70 (30%), Positives = 32/70 (45%), Gaps = 7/70 (10%)
Frame = -3
Query: 496 ELFDTEGESEQGMLTGLTVLRDTSFEF-----TGTGSYDEHSAISLRGSCDH--VLDEIS 338
E + +E E G+ L V RD F + +GTGS + H ++R DH + +
Sbjct: 24 EHYTSEEEDHFGIKWWLRVTRDDQFLYVDLGKSGTGSTNFHGNFNVRVESDHGVISENFK 83
Query: 337 VSRSINDGNI 308
S S +D I
Sbjct: 84 FSGSKSDAEI 93
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,987,143
Number of Sequences: 27780
Number of extensions: 337228
Number of successful extensions: 1084
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 985
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1075
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1560745544
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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