Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20440
         (444 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    25   0.32 
AF263514-1|AAF74206.1|  127|Tribolium castaneum cytochrome P450 ...    22   2.3  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    21   4.0  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   4.0  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   4.0  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   4.0  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   4.0  
AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.          20   9.2  

>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 25.0 bits (52), Expect = 0.32
 Identities = 11/32 (34%), Positives = 19/32 (59%)
 Frame = +2

Query: 320 IVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT 415
           +VT+W + E+I++     +L V     PV+LT
Sbjct: 158 VVTDWVNFERIYYKLTKKKLSVFFGNKPVILT 189


>AF263514-1|AAF74206.1|  127|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 127

 Score = 22.2 bits (45), Expect = 2.3
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +1

Query: 289 PDPQIPHRTRNRH 327
           PD  +P RT NRH
Sbjct: 110 PDNFLPERTANRH 122


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 21.4 bits (43), Expect = 4.0
 Identities = 9/21 (42%), Positives = 10/21 (47%)
 Frame = -2

Query: 404 RGVPRGRHAAHCRRYDAKSSP 342
           RG P    AA C +   KS P
Sbjct: 33  RGTPLAMLAAQCNKLSNKSPP 53


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 4.0
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = -3

Query: 358 MPNLLHVIPVSDDSVFD 308
           +P++  +IP  DD+  D
Sbjct: 355 LPDISEIIPTGDDTTMD 371


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 4.0
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = -3

Query: 358 MPNLLHVIPVSDDSVFD 308
           +P++  +IP  DD+  D
Sbjct: 355 LPDISEIIPTGDDTTMD 371


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 4.0
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = -3

Query: 358 MPNLLHVIPVSDDSVFD 308
           +P++  +IP  DD+  D
Sbjct: 355 LPDISEIIPTGDDTTMD 371


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 4.0
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = -3

Query: 358 MPNLLHVIPVSDDSVFD 308
           +P++  +IP  DD+  D
Sbjct: 355 LPDISEIIPTGDDTTMD 371


>AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.
          Length = 292

 Score = 20.2 bits (40), Expect = 9.2
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = -3

Query: 430 VEGSLSKQDGVFLGGDTQLIVEGMMPNL 347
           V G + +  GV+ G + Q++     PNL
Sbjct: 262 VGGKVDETAGVYSGWEGQVLENMPQPNL 289


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 110,091
Number of Sequences: 336
Number of extensions: 2443
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used:  9985735
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)