Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20440
(444 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 144 2e-35
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 144 2e-35
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 144 2e-35
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 144 2e-35
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 144 2e-35
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 144 2e-35
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 144 2e-35
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 144 2e-35
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 144 2e-35
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 144 2e-35
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 143 6e-35
J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein ( C.ele... 115 1e-26
J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein ( C.ele... 115 1e-26
J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein ( C.ele... 114 3e-26
J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein ( C.ele... 114 3e-26
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 95 3e-20
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 75 2e-14
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 69 1e-12
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 42 2e-04
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 35 0.023
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 35 0.023
AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical ... 28 3.5
U41263-12|AAO38594.1| 422|Caenorhabditis elegans Hypothetical p... 27 4.6
U41263-11|AAO38595.1| 516|Caenorhabditis elegans Hypothetical p... 27 4.6
U41263-10|AAO38593.1| 610|Caenorhabditis elegans Hypothetical p... 27 4.6
AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase... 27 4.6
AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase... 27 4.6
AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying de... 27 4.6
AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying de... 27 4.6
Z73906-10|CAB54209.1| 530|Caenorhabditis elegans Hypothetical p... 27 6.1
Z73906-9|CAA98121.1| 571|Caenorhabditis elegans Hypothetical pr... 27 6.1
Z49968-1|CAA90258.2| 499|Caenorhabditis elegans Hypothetical pr... 27 6.1
Z81551-1|CAB04483.2| 335|Caenorhabditis elegans Hypothetical pr... 27 8.1
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 144 bits (350), Expect = 2e-35
Identities = 64/68 (94%), Positives = 65/68 (95%)
Frame = +2
Query: 239 GTEGLYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 418
G + YVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108
Query: 419 APLNPKAN 442
APLNPKAN
Sbjct: 109 APLNPKAN 116
Score = 115 bits (277), Expect = 1e-26
Identities = 52/53 (98%), Positives = 53/53 (100%)
Frame = +3
Query: 96 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 254
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 53
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 144 bits (350), Expect = 2e-35
Identities = 64/68 (94%), Positives = 65/68 (95%)
Frame = +2
Query: 239 GTEGLYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 418
G + YVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108
Query: 419 APLNPKAN 442
APLNPKAN
Sbjct: 109 APLNPKAN 116
Score = 114 bits (274), Expect = 3e-26
Identities = 51/53 (96%), Positives = 53/53 (100%)
Frame = +3
Query: 96 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 254
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 53
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 144 bits (350), Expect = 2e-35
Identities = 64/68 (94%), Positives = 65/68 (95%)
Frame = +2
Query: 239 GTEGLYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 418
G + YVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108
Query: 419 APLNPKAN 442
APLNPKAN
Sbjct: 109 APLNPKAN 116
Score = 115 bits (277), Expect = 1e-26
Identities = 52/53 (98%), Positives = 53/53 (100%)
Frame = +3
Query: 96 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 254
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 53
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 144 bits (350), Expect = 2e-35
Identities = 64/68 (94%), Positives = 65/68 (95%)
Frame = +2
Query: 239 GTEGLYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 418
G + YVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108
Query: 419 APLNPKAN 442
APLNPKAN
Sbjct: 109 APLNPKAN 116
Score = 115 bits (277), Expect = 1e-26
Identities = 52/53 (98%), Positives = 53/53 (100%)
Frame = +3
Query: 96 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 254
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 53
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 144 bits (350), Expect = 2e-35
Identities = 64/68 (94%), Positives = 65/68 (95%)
Frame = +2
Query: 239 GTEGLYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 418
G + YVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108
Query: 419 APLNPKAN 442
APLNPKAN
Sbjct: 109 APLNPKAN 116
Score = 115 bits (277), Expect = 1e-26
Identities = 52/53 (98%), Positives = 53/53 (100%)
Frame = +3
Query: 96 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 254
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 53
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 144 bits (350), Expect = 2e-35
Identities = 64/68 (94%), Positives = 65/68 (95%)
Frame = +2
Query: 239 GTEGLYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 418
G + YVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108
Query: 419 APLNPKAN 442
APLNPKAN
Sbjct: 109 APLNPKAN 116
Score = 112 bits (270), Expect = 1e-25
Identities = 49/53 (92%), Positives = 53/53 (100%)
Frame = +3
Query: 96 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 254
MCD++VAAL++DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS
Sbjct: 1 MCDDDVAALILDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 53
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 144 bits (350), Expect = 2e-35
Identities = 64/68 (94%), Positives = 65/68 (95%)
Frame = +2
Query: 239 GTEGLYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 418
G + YVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108
Query: 419 APLNPKAN 442
APLNPKAN
Sbjct: 109 APLNPKAN 116
Score = 115 bits (277), Expect = 1e-26
Identities = 52/53 (98%), Positives = 53/53 (100%)
Frame = +3
Query: 96 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 254
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 53
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 144 bits (350), Expect = 2e-35
Identities = 64/68 (94%), Positives = 65/68 (95%)
Frame = +2
Query: 239 GTEGLYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 418
G + YVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 5 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 64
Query: 419 APLNPKAN 442
APLNPKAN
Sbjct: 65 APLNPKAN 72
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 144 bits (350), Expect = 2e-35
Identities = 64/68 (94%), Positives = 65/68 (95%)
Frame = +2
Query: 239 GTEGLYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 418
G + YVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 35 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 94
Query: 419 APLNPKAN 442
APLNPKAN
Sbjct: 95 APLNPKAN 102
Score = 77.0 bits (181), Expect = 6e-15
Identities = 34/35 (97%), Positives = 35/35 (100%)
Frame = +3
Query: 150 KAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 254
+AGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS
Sbjct: 5 RAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 39
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 144 bits (350), Expect = 2e-35
Identities = 64/68 (94%), Positives = 65/68 (95%)
Frame = +2
Query: 239 GTEGLYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 418
G + YVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108
Query: 419 APLNPKAN 442
APLNPKAN
Sbjct: 109 APLNPKAN 116
Score = 115 bits (277), Expect = 1e-26
Identities = 52/53 (98%), Positives = 53/53 (100%)
Frame = +3
Query: 96 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 254
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 53
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 143 bits (346), Expect = 6e-35
Identities = 62/68 (91%), Positives = 65/68 (95%)
Frame = +2
Query: 239 GTEGLYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 418
G + YVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR+APEEHPVLLTE
Sbjct: 48 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRIAPEEHPVLLTE 107
Query: 419 APLNPKAN 442
APLNPK+N
Sbjct: 108 APLNPKSN 115
Score = 109 bits (261), Expect = 1e-24
Identities = 49/51 (96%), Positives = 51/51 (100%)
Frame = +3
Query: 102 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 254
+EE+AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS
Sbjct: 2 EEEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 52
>J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene III, 5' end. ).
Length = 86
Score = 115 bits (277), Expect = 1e-26
Identities = 52/53 (98%), Positives = 53/53 (100%)
Frame = +3
Query: 96 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 254
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 53
Score = 76.6 bits (180), Expect = 8e-15
Identities = 34/38 (89%), Positives = 35/38 (92%)
Frame = +2
Query: 239 GTEGLYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 352
G + YVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene I, 5' end. ).
Length = 86
Score = 115 bits (277), Expect = 1e-26
Identities = 52/53 (98%), Positives = 53/53 (100%)
Frame = +3
Query: 96 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 254
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 53
Score = 76.6 bits (180), Expect = 8e-15
Identities = 34/38 (89%), Positives = 35/38 (92%)
Frame = +2
Query: 239 GTEGLYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 352
G + YVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene IV, 5' end. ).
Length = 86
Score = 114 bits (274), Expect = 3e-26
Identities = 51/53 (96%), Positives = 53/53 (100%)
Frame = +3
Query: 96 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 254
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 53
Score = 76.6 bits (180), Expect = 8e-15
Identities = 34/38 (89%), Positives = 35/38 (92%)
Frame = +2
Query: 239 GTEGLYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 352
G + YVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene II, 5' end. ).
Length = 83
Score = 114 bits (274), Expect = 3e-26
Identities = 51/53 (96%), Positives = 53/53 (100%)
Frame = +3
Query: 96 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 254
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 53
Score = 70.9 bits (166), Expect = 4e-13
Identities = 31/35 (88%), Positives = 32/35 (91%)
Frame = +2
Query: 239 GTEGLYVGDEAQSKRGILTLKYPIEHGIVTNWDDM 343
G + YVGDEAQSKRGILTLKYPIEHGIVTNWDDM
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDM 83
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 94.7 bits (225), Expect = 3e-20
Identities = 39/70 (55%), Positives = 56/70 (80%), Gaps = 2/70 (2%)
Frame = +2
Query: 239 GTEG-LYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTF-YNELRVAPEEHPVLL 412
G +G +++G +A+S RG+ +++YP+EHGIV NW DMEKIW + F ++L++ PEEHPVLL
Sbjct: 50 GLDGDIFIGPKAESNRGLFSIEYPMEHGIVNNWSDMEKIWEYIFGQDQLKIFPEEHPVLL 109
Query: 413 TEAPLNPKAN 442
T+APLNP N
Sbjct: 110 TDAPLNPLKN 119
Score = 52.0 bits (119), Expect = 2e-07
Identities = 21/39 (53%), Positives = 29/39 (74%)
Frame = +3
Query: 120 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG 236
+V+DNGSG+ KAGFAG+ P+ F + VGRP++ VM G
Sbjct: 11 VVIDNGSGVIKAGFAGEQQPKVRFANFVGRPKYHRVMAG 49
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 74.9 bits (176), Expect = 2e-14
Identities = 35/74 (47%), Positives = 47/74 (63%), Gaps = 1/74 (1%)
Frame = +2
Query: 224 RDGRYGTEGLYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNE-LRVAPEEH 400
R G + L VG+E R +L + YP+++GIV NWDDM +W HTF E L + P+E
Sbjct: 46 RVGNIEIKDLMVGEECSQLRQMLDINYPMDNGIVRNWDDMAHVWDHTFGPEKLDIDPKEC 105
Query: 401 PVLLTEAPLNPKAN 442
+LLTE PLNP +N
Sbjct: 106 KLLLTEPPLNPNSN 119
Score = 45.6 bits (103), Expect = 2e-05
Identities = 18/31 (58%), Positives = 24/31 (77%)
Frame = +3
Query: 120 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 212
+VVDNG+G K G+AG + P +FPS+VGRP
Sbjct: 9 IVVDNGTGFVKCGYAGTNFPAHIFPSMVGRP 39
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 69.3 bits (162), Expect = 1e-12
Identities = 32/64 (50%), Positives = 39/64 (60%), Gaps = 1/64 (1%)
Frame = +2
Query: 254 YVGDEAQSKRGI-LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLN 430
++GDEA S T+KYPI HGIV +WD ME+ W + LR PE+H LLTE PLN
Sbjct: 66 FIGDEALSPAATNYTVKYPIRHGIVEDWDLMERYWEQCIFKYLRAEPEDHFFLLTEPPLN 125
Query: 431 PKAN 442
N
Sbjct: 126 TPEN 129
Score = 36.7 bits (81), Expect = 0.008
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = +3
Query: 96 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIV 203
M ++ A V+DNG+G K G+AG+ P+ + PS +
Sbjct: 1 MSAHQLPACVIDNGTGYTKLGYAGNTEPQFIIPSAI 36
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 41.9 bits (94), Expect = 2e-04
Identities = 17/44 (38%), Positives = 28/44 (63%)
Frame = +2
Query: 308 IEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA 439
++ G++ +W+ EKI H++ N L P EHPVL +E+ N +A
Sbjct: 94 MKEGLIEDWELFEKIVEHSYENILYSNPSEHPVLFSESSWNDRA 137
Score = 33.5 bits (73), Expect = 0.071
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +3
Query: 105 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIV 203
+EV+ LV D GS + GFAG++ P+ PS +
Sbjct: 9 DEVSGLVFDAGSQSFRVGFAGEEYPKGDIPSYI 41
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 35.1 bits (77), Expect = 0.023
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Frame = +2
Query: 212 PPSGRDGRYGTEGLYVGDEAQSKRGILTLKY--PIEHGIVTNWDDMEKIWHHTF 367
P S ++ + ++V E + +L Y PIE G V NWD ++IW TF
Sbjct: 29 PNSIVKAKHEKKRVFVAHEQEECSDKFSLFYVRPIERGYVVNWDTQQQIWEKTF 82
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 35.1 bits (77), Expect = 0.023
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Frame = +2
Query: 212 PPSGRDGRYGTEGLYVGDEAQSKRGILTLKY--PIEHGIVTNWDDMEKIWHHTF 367
P S ++ + ++V E + +L Y PIE G V NWD ++IW TF
Sbjct: 29 PNSIVKAKHEKKRVFVAHEQEECSDKFSLFYVRPIERGYVVNWDTQQQIWEKTF 82
>AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical
protein C08F1.11 protein.
Length = 279
Score = 27.9 bits (59), Expect = 3.5
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +3
Query: 150 KAGFAGDDAPRAVFPSIVGRPRHQG 224
KA + G D P+A F I+G ++G
Sbjct: 44 KASYLGHDTPQATFREIIGNKEYRG 68
>U41263-12|AAO38594.1| 422|Caenorhabditis elegans Hypothetical
protein T19D12.2b protein.
Length = 422
Score = 27.5 bits (58), Expect = 4.6
Identities = 24/93 (25%), Positives = 42/93 (45%)
Frame = -3
Query: 370 VEGMMPNLLHVIPVSDDSVFDGVFEGQDTSFALCLISYIESFCPIPTITP*WRGLPTIEG 191
V G P+ L +IP D + + G S + +YI++ P+P TP R +
Sbjct: 241 VNGNQPSQLTLIPYPDSNTYPTYPYGWIRSVN-DIGNYIDAISPLPLATPDPRISDALTF 299
Query: 190 NTARGASSPAKPALHIPEPLSTTNAATSSSHIL 92
+A+ + +K L + + NAA S++ L
Sbjct: 300 ISAQPTTLNSKVVLLVGSNGTNVNAAMDSANQL 332
>U41263-11|AAO38595.1| 516|Caenorhabditis elegans Hypothetical
protein T19D12.2c protein.
Length = 516
Score = 27.5 bits (58), Expect = 4.6
Identities = 24/93 (25%), Positives = 42/93 (45%)
Frame = -3
Query: 370 VEGMMPNLLHVIPVSDDSVFDGVFEGQDTSFALCLISYIESFCPIPTITP*WRGLPTIEG 191
V G P+ L +IP D + + G S + +YI++ P+P TP R +
Sbjct: 241 VNGNQPSQLTLIPYPDSNTYPTYPYGWIRSVN-DIGNYIDAISPLPLATPDPRISDALTF 299
Query: 190 NTARGASSPAKPALHIPEPLSTTNAATSSSHIL 92
+A+ + +K L + + NAA S++ L
Sbjct: 300 ISAQPTTLNSKVVLLVGSNGTNVNAAMDSANQL 332
>U41263-10|AAO38593.1| 610|Caenorhabditis elegans Hypothetical
protein T19D12.2a protein.
Length = 610
Score = 27.5 bits (58), Expect = 4.6
Identities = 24/93 (25%), Positives = 42/93 (45%)
Frame = -3
Query: 370 VEGMMPNLLHVIPVSDDSVFDGVFEGQDTSFALCLISYIESFCPIPTITP*WRGLPTIEG 191
V G P+ L +IP D + + G S + +YI++ P+P TP R +
Sbjct: 241 VNGNQPSQLTLIPYPDSNTYPTYPYGWIRSVN-DIGNYIDAISPLPLATPDPRISDALTF 299
Query: 190 NTARGASSPAKPALHIPEPLSTTNAATSSSHIL 92
+A+ + +K L + + NAA S++ L
Sbjct: 300 ISAQPTTLNSKVVLLVGSNGTNVNAAMDSANQL 332
>AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase C
beta protein.
Length = 1418
Score = 27.5 bits (58), Expect = 4.6
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -3
Query: 175 ASSPAKPALHIPEPLSTTNAATSS 104
+SSPA P++ P P +T++ +TSS
Sbjct: 652 SSSPATPSISGPPPCATSSGSTSS 675
>AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase C
beta homolog EGL-8 protein.
Length = 1431
Score = 27.5 bits (58), Expect = 4.6
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -3
Query: 175 ASSPAKPALHIPEPLSTTNAATSS 104
+SSPA P++ P P +T++ +TSS
Sbjct: 653 SSSPATPSISGPPPCATSSGSTSS 676
>AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying
defective protein 8,isoform a protein.
Length = 1419
Score = 27.5 bits (58), Expect = 4.6
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -3
Query: 175 ASSPAKPALHIPEPLSTTNAATSS 104
+SSPA P++ P P +T++ +TSS
Sbjct: 653 SSSPATPSISGPPPCATSSGSTSS 676
>AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying
defective protein 8,isoform b protein.
Length = 1431
Score = 27.5 bits (58), Expect = 4.6
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -3
Query: 175 ASSPAKPALHIPEPLSTTNAATSS 104
+SSPA P++ P P +T++ +TSS
Sbjct: 653 SSSPATPSISGPPPCATSSGSTSS 676
>Z73906-10|CAB54209.1| 530|Caenorhabditis elegans Hypothetical
protein D2030.9b protein.
Length = 530
Score = 27.1 bits (57), Expect = 6.1
Identities = 12/35 (34%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +2
Query: 302 YPIEHGIVTN-WDDMEKIWHHTFYNELRVAPEEHP 403
+P E+ IV++ WD + +W E +AP +HP
Sbjct: 452 HPTENEIVSSAWDGVTTVWTWDERQEGVIAPYDHP 486
>Z73906-9|CAA98121.1| 571|Caenorhabditis elegans Hypothetical
protein D2030.9a protein.
Length = 571
Score = 27.1 bits (57), Expect = 6.1
Identities = 12/35 (34%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +2
Query: 302 YPIEHGIVTN-WDDMEKIWHHTFYNELRVAPEEHP 403
+P E+ IV++ WD + +W E +AP +HP
Sbjct: 493 HPTENEIVSSAWDGVTTVWTWDERQEGVIAPYDHP 527
>Z49968-1|CAA90258.2| 499|Caenorhabditis elegans Hypothetical
protein M110.1 protein.
Length = 499
Score = 27.1 bits (57), Expect = 6.1
Identities = 14/28 (50%), Positives = 16/28 (57%)
Frame = +2
Query: 203 GKAPPSGRDGRYGTEGLYVGDEAQSKRG 286
GKA +GRDGR G EG Q +RG
Sbjct: 217 GKAGHTGRDGRPGLEGTPGTRGVQGERG 244
>Z81551-1|CAB04483.2| 335|Caenorhabditis elegans Hypothetical
protein F56A12.1 protein.
Length = 335
Score = 26.6 bits (56), Expect = 8.1
Identities = 11/28 (39%), Positives = 18/28 (64%), Gaps = 2/28 (7%)
Frame = +2
Query: 329 NWDDMEKIWHHTFYNE--LRVAPEEHPV 406
+++D++ IWHH Y E L+ E +PV
Sbjct: 172 HYNDLQDIWHHARYKESQLKRGKELNPV 199
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,000,661
Number of Sequences: 27780
Number of extensions: 243172
Number of successful extensions: 860
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 766
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 858
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 767282256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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