Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20440
(444 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 143 4e-35
At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 143 4e-35
At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 143 5e-35
At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 143 5e-35
At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 142 7e-35
At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 142 7e-35
At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 141 2e-34
At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 141 2e-34
At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 141 2e-34
At2g42100.1 68415.m05205 actin, putative very strong similarity ... 130 3e-31
At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Ara... 124 3e-29
At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 120 4e-28
At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 79 1e-15
At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 69 1e-12
At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identica... 64 5e-11
At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 64 5e-11
At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 44 5e-05
At3g12380.1 68416.m01543 actin/actin-like family protein similar... 43 1e-04
At5g01040.1 68418.m00007 laccase family protein / diphenol oxida... 36 0.016
At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identica... 32 0.20
At3g07870.1 68416.m00962 F-box family protein contains F-box dom... 26 1.1
At1g16690.2 68414.m01999 transcription factor-related similar to... 28 2.5
At1g16690.1 68414.m01998 transcription factor-related similar to... 28 2.5
At5g64580.1 68418.m08116 AAA-type ATPase family protein similar ... 28 3.3
At1g43245.1 68414.m04985 expressed protein 28 3.3
At5g06610.1 68418.m00747 expressed protein contains Pfam profile... 27 4.3
At3g12650.1 68416.m01575 expressed protein 27 4.3
At3g48860.2 68416.m05337 expressed protein 26 10.0
At3g48860.1 68416.m05336 expressed protein 26 10.0
At2g41890.1 68415.m05181 curculin-like (mannose-binding) lectin ... 26 10.0
At2g38460.1 68415.m04723 iron transporter-related contains tran... 26 10.0
At1g55420.1 68414.m06339 DC1 domain-containing protein contains ... 26 10.0
>At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to
SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana}
Length = 377
Score = 143 bits (347), Expect = 4e-35
Identities = 63/68 (92%), Positives = 65/68 (95%)
Frame = +2
Query: 239 GTEGLYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 418
G + YVGDEAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 50 GQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 109
Query: 419 APLNPKAN 442
APLNPKAN
Sbjct: 110 APLNPKAN 117
Score = 92.3 bits (219), Expect = 1e-19
Identities = 41/50 (82%), Positives = 45/50 (90%)
Frame = +3
Query: 105 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 254
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDA 54
>At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496
Actin 11 {Arabidopsis thaliana}
Length = 377
Score = 143 bits (347), Expect = 4e-35
Identities = 63/68 (92%), Positives = 65/68 (95%)
Frame = +2
Query: 239 GTEGLYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 418
G + YVGDEAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 50 GQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 109
Query: 419 APLNPKAN 442
APLNPKAN
Sbjct: 110 APLNPKAN 117
Score = 92.3 bits (219), Expect = 1e-19
Identities = 41/50 (82%), Positives = 45/50 (90%)
Frame = +3
Query: 105 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 254
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDA 54
>At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494
Actin 4 {Arabidopsis thaliana}
Length = 377
Score = 143 bits (346), Expect = 5e-35
Identities = 63/68 (92%), Positives = 64/68 (94%)
Frame = +2
Query: 239 GTEGLYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 418
G + YVGDEAQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 50 GQKDAYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 109
Query: 419 APLNPKAN 442
APLNPKAN
Sbjct: 110 APLNPKAN 117
Score = 92.3 bits (219), Expect = 1e-19
Identities = 41/50 (82%), Positives = 45/50 (90%)
Frame = +3
Query: 105 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 254
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDA 54
>At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497
Actin 12 {Arabidopsis thaliana}
Length = 377
Score = 143 bits (346), Expect = 5e-35
Identities = 63/68 (92%), Positives = 64/68 (94%)
Frame = +2
Query: 239 GTEGLYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 418
G + YVGDEAQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 50 GQKDAYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 109
Query: 419 APLNPKAN 442
APLNPKAN
Sbjct: 110 APLNPKAN 117
Score = 92.3 bits (219), Expect = 1e-19
Identities = 41/50 (82%), Positives = 45/50 (90%)
Frame = +3
Query: 105 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 254
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDA 54
>At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493
Actin 3 {Arabidopsis thaliana}; supported by full-length
cDNA: Ceres: 19581.
Length = 377
Score = 142 bits (345), Expect = 7e-35
Identities = 62/68 (91%), Positives = 64/68 (94%)
Frame = +2
Query: 239 GTEGLYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 418
G + YVGDEAQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHP+LLTE
Sbjct: 50 GQKDAYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTE 109
Query: 419 APLNPKAN 442
APLNPKAN
Sbjct: 110 APLNPKAN 117
Score = 92.3 bits (219), Expect = 1e-19
Identities = 41/50 (82%), Positives = 45/50 (90%)
Frame = +3
Query: 105 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 254
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDA 54
>At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671
Actin 1 (Actin 3) {Arabidopsis thaliana}
Length = 377
Score = 142 bits (345), Expect = 7e-35
Identities = 62/68 (91%), Positives = 64/68 (94%)
Frame = +2
Query: 239 GTEGLYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 418
G + YVGDEAQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHP+LLTE
Sbjct: 50 GQKDAYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTE 109
Query: 419 APLNPKAN 442
APLNPKAN
Sbjct: 110 APLNPKAN 117
Score = 92.3 bits (219), Expect = 1e-19
Identities = 41/50 (82%), Positives = 45/50 (90%)
Frame = +3
Query: 105 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 254
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDA 54
>At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 377
Score = 141 bits (341), Expect = 2e-34
Identities = 60/63 (95%), Positives = 63/63 (100%)
Frame = +2
Query: 254 YVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNP 433
YVGDEAQSKRGILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNP
Sbjct: 55 YVGDEAQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNP 114
Query: 434 KAN 442
KAN
Sbjct: 115 KAN 117
Score = 87.8 bits (208), Expect = 3e-18
Identities = 37/50 (74%), Positives = 44/50 (88%)
Frame = +3
Query: 105 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 254
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDA 54
>At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 371
Score = 141 bits (341), Expect = 2e-34
Identities = 60/63 (95%), Positives = 63/63 (100%)
Frame = +2
Query: 254 YVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNP 433
YVGDEAQSKRGILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNP
Sbjct: 55 YVGDEAQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNP 114
Query: 434 KAN 442
KAN
Sbjct: 115 KAN 117
Score = 87.8 bits (208), Expect = 3e-18
Identities = 37/50 (74%), Positives = 44/50 (88%)
Frame = +3
Query: 105 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 254
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDA 54
>At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293
Actin 8 {Arabidopsis thaliana}; nearly identical to
SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and
to At3g18780
Length = 377
Score = 141 bits (341), Expect = 2e-34
Identities = 60/63 (95%), Positives = 63/63 (100%)
Frame = +2
Query: 254 YVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNP 433
YVGDEAQSKRGILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNP
Sbjct: 55 YVGDEAQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNP 114
Query: 434 KAN 442
KAN
Sbjct: 115 KAN 117
Score = 87.8 bits (208), Expect = 3e-18
Identities = 37/50 (74%), Positives = 44/50 (88%)
Frame = +3
Query: 105 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 254
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDA 54
>At2g42100.1 68415.m05205 actin, putative very strong similarity to
SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493
Actin 3 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 378
Score = 130 bits (315), Expect = 3e-31
Identities = 53/63 (84%), Positives = 61/63 (96%)
Frame = +2
Query: 254 YVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNP 433
+VGDEAQ++RGIL+LKYPIEHG+V+NWDDMEKIWHHTFYNELR+ PEEHP+LLTEAPLNP
Sbjct: 56 FVGDEAQARRGILSLKYPIEHGVVSNWDDMEKIWHHTFYNELRLEPEEHPILLTEAPLNP 115
Query: 434 KAN 442
K N
Sbjct: 116 KVN 118
Score = 88.2 bits (209), Expect = 2e-18
Identities = 38/50 (76%), Positives = 45/50 (90%)
Frame = +3
Query: 105 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 254
+E A+V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH+GVMVGM +KD+
Sbjct: 6 DESVAIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHRGVMVGMDEKDT 55
>At2g42170.1 68415.m05219 actin, putative similar to actin 2
[Arabidopsis thaliana] gi|9293903|dbj|BAB01806
Length = 329
Score = 124 bits (299), Expect = 3e-29
Identities = 51/64 (79%), Positives = 62/64 (96%)
Frame = +2
Query: 251 LYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLN 430
L+VGD+A+++ GILTL YP+EHG+V+NWDDMEKIW+HTFY+ELRVAPEEHPVLLTEAPLN
Sbjct: 9 LFVGDDAEARSGILTLDYPMEHGVVSNWDDMEKIWYHTFYSELRVAPEEHPVLLTEAPLN 68
Query: 431 PKAN 442
PKA+
Sbjct: 69 PKAD 72
>At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin
11 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 366
Score = 120 bits (289), Expect = 4e-28
Identities = 55/73 (75%), Positives = 59/73 (80%)
Frame = +2
Query: 224 RDGRYGTEGLYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 403
RDG E YVG+E + R ILTLK P+EHGIV NWDDMEKIWH+TFYNELRV PEEHP
Sbjct: 35 RDGLNPNES-YVGEEGHANRDILTLKDPMEHGIVNNWDDMEKIWHYTFYNELRVDPEEHP 93
Query: 404 VLLTEAPLNPKAN 442
VLLTEAP NPKAN
Sbjct: 94 VLLTEAPYNPKAN 106
Score = 52.4 bits (120), Expect = 1e-07
Identities = 21/32 (65%), Positives = 26/32 (81%)
Frame = +3
Query: 120 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPR 215
+V D G GM +AGFAGD+AP+ VFP +VGRPR
Sbjct: 4 IVCDKGHGMVQAGFAGDEAPKVVFPCVVGRPR 35
>At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly
identical to actin-related protein 2 (ARP2) [Arabidopsis
thaliana] GI:3818624; contains Pfam profile PF00022:
Actin
Length = 389
Score = 79.4 bits (187), Expect = 1e-15
Identities = 31/64 (48%), Positives = 42/64 (65%)
Frame = +2
Query: 251 LYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLN 430
+ VG+ R L + YP+ +GIV NWDDME +W H FYNEL++ P + +LLT+ PLN
Sbjct: 53 IVVGETCSELRHQLDINYPVHNGIVQNWDDMEHVWDHAFYNELKINPSDCKILLTDPPLN 112
Query: 431 PKAN 442
P N
Sbjct: 113 PSKN 116
Score = 45.6 bits (103), Expect = 2e-05
Identities = 18/31 (58%), Positives = 24/31 (77%)
Frame = +3
Query: 120 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 212
+V DNG+G K GFAG++ P +VFP +VGRP
Sbjct: 7 VVCDNGTGYVKCGFAGENFPTSVFPCVVGRP 37
>At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical
to actin-related protein 3 (ARP3) [Arabidopsis thaliana]
GI:21427461; contains Pfam profile PF00022: Actin
Length = 427
Score = 69.3 bits (162), Expect = 1e-12
Identities = 34/63 (53%), Positives = 41/63 (65%), Gaps = 3/63 (4%)
Frame = +2
Query: 254 YVGDEAQSK-RGILT--LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAP 424
Y+GDEA +K R T L YPIEHG V +WD ME+ W +N LR PE+H LLTE+P
Sbjct: 69 YIGDEALAKSRSSSTHNLHYPIEHGQVEDWDAMERYWQQCIFNYLRCDPEDHYFLLTESP 128
Query: 425 LNP 433
L P
Sbjct: 129 LTP 131
Score = 35.9 bits (79), Expect = 0.012
Identities = 14/29 (48%), Positives = 21/29 (72%)
Frame = +3
Query: 117 ALVVDNGSGMCKAGFAGDDAPRAVFPSIV 203
A+V+DNG+G K GFAG+ P + P++V
Sbjct: 8 AIVIDNGTGYTKMGFAGNVEPCFILPTVV 36
>At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identical
to actin-related protein 5 (ARP5) GI:21489922 from
[Arabidopsis thaliana]
Length = 145
Score = 63.7 bits (148), Expect = 5e-11
Identities = 29/69 (42%), Positives = 41/69 (59%), Gaps = 1/69 (1%)
Frame = +2
Query: 227 DGRYGTEGLYVGDEAQS-KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 403
D G LY G +A + +R + + P + GIVT+WD ++ +W H F N L + P EHP
Sbjct: 61 DKEKGKRKLYTGSQALNFRRDQMEILSPTKDGIVTDWDMVDNVWDHAFRNCLMIDPTEHP 120
Query: 404 VLLTEAPLN 430
+LL E PLN
Sbjct: 121 MLLAEPPLN 129
Score = 57.2 bits (132), Expect = 5e-09
Identities = 24/34 (70%), Positives = 31/34 (91%)
Frame = +3
Query: 105 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG 206
+EV+A+VVD GS CKAG+AG+DAP+AVFPS+VG
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVVG 38
>At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary
identical to actin-related protein 4 (ARP4) [Arabidopsis
thaliana] GI:21427463; contains Pfam profile PF00022:
Actin; supporting cDNA gi|21427462|gb|AF507912.1|
Length = 441
Score = 63.7 bits (148), Expect = 5e-11
Identities = 29/61 (47%), Positives = 41/61 (67%), Gaps = 1/61 (1%)
Frame = +2
Query: 251 LYVGDEAQS-KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPL 427
LYVG +A S +R + + PI+ GIV++WD ++ IW H F + L + P EHP+LL E PL
Sbjct: 75 LYVGSQAMSYRRDHMEVLSPIKDGIVSDWDLVDNIWEHAFKSCLMIDPTEHPMLLAEPPL 134
Query: 428 N 430
N
Sbjct: 135 N 135
Score = 56.8 bits (131), Expect = 6e-09
Identities = 23/34 (67%), Positives = 31/34 (91%)
Frame = +3
Query: 105 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG 206
+EV+A+VVD GS CKAG+AG+DAP+AVFPS++G
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVIG 38
>At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly
identical to actin-related protein 6 (ARP6) [Arabidopsis
thaliana] GI:21427467; contains Pfam profile PF00022:
Actin
Length = 421
Score = 44.0 bits (99), Expect = 5e-05
Identities = 19/45 (42%), Positives = 28/45 (62%)
Frame = +2
Query: 296 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLN 430
++ PI+ G + N D +IW H F + L +AP +LLTEAPL+
Sbjct: 61 VRRPIDRGYLINSDLQREIWSHLFTSLLHIAPSSSSLLLTEAPLS 105
Score = 32.7 bits (71), Expect = 0.11
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +3
Query: 120 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 212
+V+DNG G+ KAG G+ P V P+ + +P
Sbjct: 5 VVLDNGGGLIKAGQGGERDPTTVIPNCLYKP 35
>At3g12380.1 68416.m01543 actin/actin-like family protein similar to
SP|P53946 Actin-like protein ARP5 {Saccharomyces
cerevisiae}; contains Pfam profile PF00022: Actin
Length = 724
Score = 42.7 bits (96), Expect = 1e-04
Identities = 17/34 (50%), Positives = 25/34 (73%)
Frame = +3
Query: 120 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 221
+V+DNG+ + G+AG+ PR VF +IV RPRH+
Sbjct: 22 IVIDNGASYFRIGWAGETEPRVVFRNIVQRPRHK 55
>At5g01040.1 68418.m00007 laccase family protein / diphenol oxidase
family protein similar to laccase [Pinus
taeda][GI:13661201], lac110 laccase, Populus
trichocarpa, EMBL:PTY13773
Length = 584
Score = 35.5 bits (78), Expect = 0.016
Identities = 25/87 (28%), Positives = 42/87 (48%), Gaps = 3/87 (3%)
Frame = -3
Query: 355 PNLLHVIPVSDDSVFDGVFEGQDT--SFALCLISYIESF-CPIPTITP*WRGLPTIEGNT 185
P L V+ ++ D + + + + YI + P P I P RGL +G T
Sbjct: 249 PYLTDVMILTPGQTVDALLTADQAIGKYYMATLPYISAIGIPTPDIKP-TRGLIVYQGAT 307
Query: 184 ARGASSPAKPALHIPEPLSTTNAATSS 104
+ +SSPA+P + +P +ST + TS+
Sbjct: 308 S--SSSPAEPLMPVPNDMSTAHRFTSN 332
>At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identical
to actin-related protein 7 (ARP7) [Arabidopsis thaliana]
GI:21427469; contains Pfam profile PF00022: Actin
Length = 363
Score = 31.9 bits (69), Expect = 0.20
Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = +2
Query: 305 PIEHGIVTNWDDMEKIWHHTFYNELR-VAPEEHPVLLTEAPLNPKA 439
PIE G++ +WD ME + + Y L E +L T+ PKA
Sbjct: 57 PIERGLIRDWDAMEDLLRYVVYTGLGWEEGNEGNILFTDPLCTPKA 102
Score = 27.5 bits (58), Expect = 4.3
Identities = 16/32 (50%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +3
Query: 117 ALVVDNGSGMCKAGFA-GDDAPRAVFPSIVGR 209
ALVVD GS KAG A D +P + PS + R
Sbjct: 3 ALVVDAGSKFLKAGAAIPDQSPAMIIPSQMKR 34
>At3g07870.1 68416.m00962 F-box family protein contains F-box domain
Pfam:PF00646
Length = 417
Score = 26.2 bits (55), Expect(2) = 1.1
Identities = 12/31 (38%), Positives = 16/31 (51%), Gaps = 2/31 (6%)
Frame = -3
Query: 217 WRGLPTIEGNTARGASSPAKPA--LHIPEPL 131
WR + T G + +SSP KP LH P+
Sbjct: 55 WRSVLTQHGRLSSSSSSPTKPCLLLHCDSPI 85
Score = 21.8 bits (44), Expect(2) = 1.1
Identities = 8/27 (29%), Positives = 17/27 (62%)
Frame = -3
Query: 406 DGVFLGGDTQLIVEGMMPNLLHVIPVS 326
DGV +GG + + E ++ ++ +P+S
Sbjct: 17 DGVGVGGGLESLPEDIIADIFSRLPIS 43
>At1g16690.2 68414.m01999 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 28.3 bits (60), Expect = 2.5
Identities = 12/43 (27%), Positives = 19/43 (44%)
Frame = +2
Query: 263 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP 391
D A L++KY + H I + W + +IW L+ P
Sbjct: 169 DAAGEALKYLSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP 211
>At1g16690.1 68414.m01998 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 28.3 bits (60), Expect = 2.5
Identities = 12/43 (27%), Positives = 19/43 (44%)
Frame = +2
Query: 263 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP 391
D A L++KY + H I + W + +IW L+ P
Sbjct: 169 DAAGEALKYLSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP 211
>At5g64580.1 68418.m08116 AAA-type ATPase family protein similar to
zinc dependent protease [Arabidopsis thaliana]
GI:7650138; contains Pfam profile PF00004: ATPase AAA
family
Length = 855
Score = 27.9 bits (59), Expect = 3.3
Identities = 12/46 (26%), Positives = 24/46 (52%)
Frame = +2
Query: 236 YGTEGLYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYN 373
Y +G +G+E SK+ I+ ++ ++ + W+D+ K H N
Sbjct: 180 YYKDGEPLGEEEDSKKEIIFRRHIVDRMPIDGWNDVWKKLHQQIVN 225
>At1g43245.1 68414.m04985 expressed protein
Length = 558
Score = 27.9 bits (59), Expect = 3.3
Identities = 16/37 (43%), Positives = 21/37 (56%)
Frame = -2
Query: 275 SVPHLLHRVLLSHTDHHALMAGPSHDRGKHCARSIIS 165
S PH L+ +L T+HH LMA PS H A + I+
Sbjct: 96 SSPHRLNNLL---TNHHLLMADPSISVAIHHAANFIA 129
>At5g06610.1 68418.m00747 expressed protein contains Pfam profile
PF04788: Protein of unknown function (DUF620)
Length = 368
Score = 27.5 bits (58), Expect = 4.3
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = -3
Query: 217 WRGLPTIEGNTARGASSPAKPALHIPEPLSTTNAATSSSHI 95
WR P + + A+GA P + AL +PL+ ++ +S+ +
Sbjct: 167 WRYTPWLGDHAAKGAIRPLRRALQGLDPLTISSVFSSAQFV 207
>At3g12650.1 68416.m01575 expressed protein
Length = 238
Score = 27.5 bits (58), Expect = 4.3
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = -3
Query: 430 VEGSLSKQDGVFLGGDTQLIVEGMMPNL 347
+EG ++D LG +T+ ++EGMM N+
Sbjct: 99 IEGPTVERDLSALGNETRQVLEGMMKNM 126
>At3g48860.2 68416.m05337 expressed protein
Length = 577
Score = 26.2 bits (55), Expect = 10.0
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = -3
Query: 196 EGNTARGASSPAKPALHIPEPLSTTNAATSSSH 98
E + R AS+ KPA H P +S+T + +S+ +
Sbjct: 82 EDLSLRFASASLKPARHAPSSISSTGSNSSNGN 114
>At3g48860.1 68416.m05336 expressed protein
Length = 494
Score = 26.2 bits (55), Expect = 10.0
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = -3
Query: 196 EGNTARGASSPAKPALHIPEPLSTTNAATSSSH 98
E + R AS+ KPA H P +S+T + +S+ +
Sbjct: 82 EDLSLRFASASLKPARHAPSSISSTGSNSSNGN 114
>At2g41890.1 68415.m05181 curculin-like (mannose-binding) lectin
family protein / PAN domain-containing protein contains
Pfam profiles: PF01453 lectin (probable mannose
binding), PF00024 PAN domain
Length = 764
Score = 26.2 bits (55), Expect = 10.0
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = +3
Query: 105 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVM 230
E++ A + + G G+C A +D + V I GR +GV+
Sbjct: 632 EDLEAKLTEYGFGLCAADKDVEDFGKTVLALITGRYEPEGVV 673
>At2g38460.1 68415.m04723 iron transporter-related contains
transmembrane domains; similar to iron-regulated
transporter IREG1 (GI:7264727) [Mus musculus]; similar
to ferroportin1 (GI:7109247) [Mus musculus]
Length = 524
Score = 26.2 bits (55), Expect = 10.0
Identities = 18/58 (31%), Positives = 26/58 (44%)
Frame = -3
Query: 283 SFALCLISYIESFCPIPTITP*WRGLPTIEGNTARGASSPAKPALHIPEPLSTTNAAT 110
S AL + + SF + T T W G+PT RG S+ A + PL + +T
Sbjct: 320 SLALLFFTVL-SFGTLMTATLQWEGIPTYIIGIGRGISATVGLAATLVYPLMQSRLST 376
>At1g55420.1 68414.m06339 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 725
Score = 26.2 bits (55), Expect = 10.0
Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = -1
Query: 402 GCSSGATRSSL*K-V*CQIFSMSSQLVTIPCSMGYLRVRIPLLLC 271
GC S + S + + C+ F + + T+PC Y R PL LC
Sbjct: 529 GCGSDSCSSYFLECIKCKSF-LGIKCATLPCEAHYTHDRHPLTLC 572
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,458,893
Number of Sequences: 28952
Number of extensions: 229062
Number of successful extensions: 661
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 622
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 661
length of database: 12,070,560
effective HSP length: 75
effective length of database: 9,899,160
effective search space used: 712739520
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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