Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20438
         (577 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.         90   4e-20
AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.           27   0.44 
AY705398-1|AAU12507.1|  555|Anopheles gambiae nicotinic acetylch...    25   2.3  
AY705397-1|AAU12506.1|  555|Anopheles gambiae nicotinic acetylch...    25   2.3  
AF364130-1|AAL35506.1|  417|Anopheles gambiae putative odorant r...    24   4.1  
AY578801-1|AAT07306.1|  506|Anopheles gambiae dSmad2 protein.          23   7.1  
AY344835-1|AAR05806.1|  334|Anopheles gambiae ICHIT protein.           23   9.4  
AF269156-1|AAF91401.1|   52|Anopheles gambiae transcription fact...    23   9.4  
AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcript...    23   9.4  

>AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.
          Length = 679

 Score = 90.2 bits (214), Expect = 4e-20
 Identities = 39/51 (76%), Positives = 44/51 (86%)
 Frame = +3

Query: 96  RAGSRRIFPPQFKLQVLEAYRRDSQCRGNQRATARKFGIHRRQIQKWLQAE 248
           + GSRRIF  QFKLQVL++YR D  C+GNQRATARK+GIHRRQIQKWLQ E
Sbjct: 43  KMGSRRIFTAQFKLQVLDSYRNDGDCKGNQRATARKYGIHRRQIQKWLQVE 93



 Score = 44.8 bits (101), Expect = 2e-06
 Identities = 17/41 (41%), Positives = 27/41 (65%)
 Frame = +3

Query: 126 QFKLQVLEAYRRDSQCRGNQRATARKFGIHRRQIQKWLQAE 248
           + K Q ++++  D  CRG+ RA A K+ I R+ ++KWLQ E
Sbjct: 603 KLKRQAIDSFYHDVACRGDYRAVATKYNISRKYVEKWLQQE 643



 Score = 24.6 bits (51), Expect = 2.3
 Identities = 8/18 (44%), Positives = 16/18 (88%)
 Frame = +1

Query: 505 QAFKLFRPYLLEDEDEKR 558
           ++ KLF+PYLL++E +++
Sbjct: 454 KSVKLFKPYLLDEEPKQQ 471


>AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.
          Length = 1459

 Score = 27.1 bits (57), Expect = 0.44
 Identities = 16/54 (29%), Positives = 24/54 (44%), Gaps = 1/54 (1%)
 Frame = +2

Query: 416  QPST-EPIDLSVRICSPLTLAHPPVAPEPPRKRLNYSDLTYLKMKMRSDHQSLH 574
            +PST  P   S R+  P   ++  + P  PR   NY  ++  K      HQ+ H
Sbjct: 1236 RPSTLGPSVASTRLDGPQHHSYATIGPNCPRNCDNYDTVSNCKYNTTQHHQTHH 1289


>AY705398-1|AAU12507.1|  555|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 4 protein.
          Length = 555

 Score = 24.6 bits (51), Expect = 2.3
 Identities = 19/46 (41%), Positives = 25/46 (54%)
 Frame = -3

Query: 416 VPMLEQVEV*AMKLTLAS*EVEVV*VILHFRGNQQHMEEVMAPAVE 279
           VP+L +  + AM L   S  V VV + +HFR  Q H    MAP V+
Sbjct: 303 VPLLGKYLIFAMILVSISICVTVVVLNVHFRSPQTHR---MAPWVK 345


>AY705397-1|AAU12506.1|  555|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 4 protein.
          Length = 555

 Score = 24.6 bits (51), Expect = 2.3
 Identities = 19/46 (41%), Positives = 25/46 (54%)
 Frame = -3

Query: 416 VPMLEQVEV*AMKLTLAS*EVEVV*VILHFRGNQQHMEEVMAPAVE 279
           VP+L +  + AM L   S  V VV + +HFR  Q H    MAP V+
Sbjct: 303 VPLLGKYLIFAMILVSISICVTVVVLNVHFRSPQTHR---MAPWVK 345


>AF364130-1|AAL35506.1|  417|Anopheles gambiae putative odorant
           receptor Or1 protein.
          Length = 417

 Score = 23.8 bits (49), Expect = 4.1
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = +2

Query: 497 PPRKRLNYSDLTYLKMKMRSDHQS 568
           PP ++L  +D  + +M+ R DH S
Sbjct: 232 PPERQLVATDAEWKEMRKRIDHHS 255


>AY578801-1|AAT07306.1|  506|Anopheles gambiae dSmad2 protein.
          Length = 506

 Score = 23.0 bits (47), Expect = 7.1
 Identities = 14/61 (22%), Positives = 23/61 (37%)
 Frame = +1

Query: 163 IPNVEETNVPPLGSLASIADRSKSGYKLNLLASGAVKESSTAGAITSSICCWFPRKCKIT 342
           +PN+  T  PP G ++   D       +  L+  +  E  T   +      W    C I+
Sbjct: 262 VPNIPNTETPPPGYMSEDGDPLDQNDNMTDLSRMSPSEMDTQPVMYHEPTFW----CSIS 317

Query: 343 Y 345
           Y
Sbjct: 318 Y 318


>AY344835-1|AAR05806.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 22.6 bits (46), Expect = 9.4
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = +2

Query: 437 DLSVRICSPLTLAHPPVAPEPP 502
           D +  I +  T A+PP   EPP
Sbjct: 258 DPTTTITTDYTTAYPPTTNEPP 279


>AF269156-1|AAF91401.1|   52|Anopheles gambiae transcription factor
           zen protein.
          Length = 52

 Score = 22.6 bits (46), Expect = 9.4
 Identities = 9/24 (37%), Positives = 12/24 (50%)
 Frame = +3

Query: 171 CRGNQRATARKFGIHRRQIQKWLQ 242
           CR  +    RK  +  RQI+ W Q
Sbjct: 26  CRPRRIELTRKLALTERQIKIWFQ 49


>AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1168

 Score = 22.6 bits (46), Expect = 9.4
 Identities = 13/32 (40%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
 Frame = +2

Query: 479  PPVAPEPPR-KRLNYSDLTYLKMKMRSDHQSL 571
            PPV P PPR +RL  S  T    + R ++  L
Sbjct: 1104 PPVPPIPPRSRRLPPSPRTTEMRRRRRNYMQL 1135


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 518,202
Number of Sequences: 2352
Number of extensions: 8786
Number of successful extensions: 28
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 54665910
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)