Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20438
         (577 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF125986-1|AAD22080.1|  704|Drosophila melanogaster putative tra...    91   1e-18
AE014298-1028|AAF46251.3|  704|Drosophila melanogaster CG9653-PA...    91   1e-18
AB023583-1|BAA76710.1|  704|Drosophila melanogaster Brk protein.       91   1e-18
AE014297-1087|AAF54491.1|  695|Drosophila melanogaster CG12809-P...    33   0.37 
AY094813-1|AAM11166.1| 1413|Drosophila melanogaster LD30602p pro...    30   2.0  
AE014134-2739|AAF53547.2| 1413|Drosophila melanogaster CG31738-P...    30   2.0  
AE014134-2738|AAF53546.3| 1700|Drosophila melanogaster CG31738-P...    30   2.0  
AE014297-3703|AAN14037.1|  126|Drosophila melanogaster CG31112-P...    28   7.9  

>AF125986-1|AAD22080.1|  704|Drosophila melanogaster putative
           transcription factor protein.
          Length = 704

 Score = 90.6 bits (215), Expect = 1e-18
 Identities = 39/51 (76%), Positives = 44/51 (86%)
 Frame = +3

Query: 96  RAGSRRIFPPQFKLQVLEAYRRDSQCRGNQRATARKFGIHRRQIQKWLQAE 248
           + GSRRIF P FKLQVLE+YR D+ C+GNQRATARK+ IHRRQIQKWLQ E
Sbjct: 41  KMGSRRIFTPHFKLQVLESYRNDNDCKGNQRATARKYNIHRRQIQKWLQCE 91


>AE014298-1028|AAF46251.3|  704|Drosophila melanogaster CG9653-PA
           protein.
          Length = 704

 Score = 90.6 bits (215), Expect = 1e-18
 Identities = 39/51 (76%), Positives = 44/51 (86%)
 Frame = +3

Query: 96  RAGSRRIFPPQFKLQVLEAYRRDSQCRGNQRATARKFGIHRRQIQKWLQAE 248
           + GSRRIF P FKLQVLE+YR D+ C+GNQRATARK+ IHRRQIQKWLQ E
Sbjct: 41  KMGSRRIFTPHFKLQVLESYRNDNDCKGNQRATARKYNIHRRQIQKWLQCE 91


>AB023583-1|BAA76710.1|  704|Drosophila melanogaster Brk protein.
          Length = 704

 Score = 90.6 bits (215), Expect = 1e-18
 Identities = 39/51 (76%), Positives = 44/51 (86%)
 Frame = +3

Query: 96  RAGSRRIFPPQFKLQVLEAYRRDSQCRGNQRATARKFGIHRRQIQKWLQAE 248
           + GSRRIF P FKLQVLE+YR D+ C+GNQRATARK+ IHRRQIQKWLQ E
Sbjct: 41  KMGSRRIFTPHFKLQVLESYRNDNDCKGNQRATARKYNIHRRQIQKWLQCE 91


>AE014297-1087|AAF54491.1|  695|Drosophila melanogaster CG12809-PA
           protein.
          Length = 695

 Score = 32.7 bits (71), Expect = 0.37
 Identities = 13/27 (48%), Positives = 17/27 (62%)
 Frame = +2

Query: 431 PIDLSVRICSPLTLAHPPVAPEPPRKR 511
           P+DLS+R  + +    PP  P PPRKR
Sbjct: 81  PLDLSLRAAASVVPITPPSTPSPPRKR 107


>AY094813-1|AAM11166.1| 1413|Drosophila melanogaster LD30602p
           protein.
          Length = 1413

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = +2

Query: 5   TNQHAHTYPQ*NGSRPHAPCPRALRPSR 88
           ++ H+HT+PQ +   PH+P P   R  R
Sbjct: 117 SHAHSHTHPQPHAHSPHSPSPPNYRDER 144


>AE014134-2739|AAF53547.2| 1413|Drosophila melanogaster CG31738-PA,
           isoform A protein.
          Length = 1413

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = +2

Query: 5   TNQHAHTYPQ*NGSRPHAPCPRALRPSR 88
           ++ H+HT+PQ +   PH+P P   R  R
Sbjct: 117 SHAHSHTHPQPHAHSPHSPSPPNYRDER 144


>AE014134-2738|AAF53546.3| 1700|Drosophila melanogaster CG31738-PB,
           isoform B protein.
          Length = 1700

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = +2

Query: 5   TNQHAHTYPQ*NGSRPHAPCPRALRPSR 88
           ++ H+HT+PQ +   PH+P P   R  R
Sbjct: 404 SHAHSHTHPQPHAHSPHSPSPPNYRDER 431


>AE014297-3703|AAN14037.1|  126|Drosophila melanogaster CG31112-PA
           protein.
          Length = 126

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 13/24 (54%), Positives = 15/24 (62%)
 Frame = +1

Query: 268 VKESSTAGAITSSICCWFPRKCKI 339
           V E  TA A  SS C W PRKC++
Sbjct: 34  VIEWQTALAWESSKCLWTPRKCRL 57


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,695,431
Number of Sequences: 53049
Number of extensions: 428560
Number of successful extensions: 1679
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1565
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1670
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2276053890
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)