Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20438
(577 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 25 0.71
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 25 0.71
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 24 1.2
AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. 23 2.9
DQ325067-1|ABD14081.1| 152|Apis mellifera complementary sex det... 22 3.8
DQ325066-1|ABD14080.1| 152|Apis mellifera complementary sex det... 22 3.8
DQ325065-1|ABD14079.1| 152|Apis mellifera complementary sex det... 22 3.8
DQ325064-1|ABD14078.1| 152|Apis mellifera complementary sex det... 22 3.8
DQ325063-1|ABD14077.1| 152|Apis mellifera complementary sex det... 22 3.8
DQ325062-1|ABD14076.1| 152|Apis mellifera complementary sex det... 22 3.8
DQ325061-1|ABD14075.1| 152|Apis mellifera complementary sex det... 22 3.8
AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 22 3.8
AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 22 3.8
AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 22 3.8
AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. 22 3.8
AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. 22 3.8
AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. 22 3.8
AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex det... 22 3.8
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 22 3.8
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase... 21 8.7
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 24.6 bits (51), Expect = 0.71
Identities = 19/46 (41%), Positives = 25/46 (54%)
Frame = -3
Query: 416 VPMLEQVEV*AMKLTLAS*EVEVV*VILHFRGNQQHMEEVMAPAVE 279
VP+L + + AM L S V VV + +HFR Q H MAP V+
Sbjct: 304 VPLLGKYLIFAMILVSISICVTVVVLNVHFRSPQTHK---MAPWVK 346
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 24.6 bits (51), Expect = 0.71
Identities = 19/46 (41%), Positives = 25/46 (54%)
Frame = -3
Query: 416 VPMLEQVEV*AMKLTLAS*EVEVV*VILHFRGNQQHMEEVMAPAVE 279
VP+L + + AM L S V VV + +HFR Q H MAP V+
Sbjct: 304 VPLLGKYLIFAMILVSISICVTVVVLNVHFRSPQTHK---MAPWVK 346
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 23.8 bits (49), Expect = 1.2
Identities = 19/45 (42%), Positives = 24/45 (53%)
Frame = -3
Query: 416 VPMLEQVEV*AMKLTLAS*EVEVV*VILHFRGNQQHMEEVMAPAV 282
VP+L + + M L S V VV + +HFR Q H VMAP V
Sbjct: 300 VPLLGKFVLFTMILDTFSICVTVVVLNVHFRSPQTH---VMAPWV 341
>AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein.
Length = 400
Score = 22.6 bits (46), Expect = 2.9
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = +3
Query: 78 DRRAEGRAGSRRIFPPQFKLQV 143
DRR GR+ RI P + Q+
Sbjct: 317 DRRGRGRSREHRIIPSHYIEQI 338
>DQ325067-1|ABD14081.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 22.2 bits (45), Expect = 3.8
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = +3
Query: 78 DRRAEGRAGSRRIFPPQFKLQV 143
DRR GR+ RI P + Q+
Sbjct: 69 DRRERGRSREHRIIPSHYIEQI 90
>DQ325066-1|ABD14080.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 22.2 bits (45), Expect = 3.8
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = +3
Query: 78 DRRAEGRAGSRRIFPPQFKLQV 143
DRR GR+ RI P + Q+
Sbjct: 69 DRRERGRSREHRIIPSHYIEQI 90
>DQ325065-1|ABD14079.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 22.2 bits (45), Expect = 3.8
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = +3
Query: 78 DRRAEGRAGSRRIFPPQFKLQV 143
DRR GR+ RI P + Q+
Sbjct: 69 DRRERGRSREHRIIPSHYIEQI 90
>DQ325064-1|ABD14078.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 22.2 bits (45), Expect = 3.8
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = +3
Query: 78 DRRAEGRAGSRRIFPPQFKLQV 143
DRR GR+ RI P + Q+
Sbjct: 69 DRRERGRSREHRIIPSHYIEQI 90
>DQ325063-1|ABD14077.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 22.2 bits (45), Expect = 3.8
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = +3
Query: 78 DRRAEGRAGSRRIFPPQFKLQV 143
DRR GR+ RI P + Q+
Sbjct: 69 DRRERGRSREHRIIPSHYIEQI 90
>DQ325062-1|ABD14076.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 22.2 bits (45), Expect = 3.8
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = +3
Query: 78 DRRAEGRAGSRRIFPPQFKLQV 143
DRR GR+ RI P + Q+
Sbjct: 69 DRRERGRSREHRIIPSHYIEQI 90
>DQ325061-1|ABD14075.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 22.2 bits (45), Expect = 3.8
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = +3
Query: 78 DRRAEGRAGSRRIFPPQFKLQV 143
DRR GR+ RI P + Q+
Sbjct: 69 DRRERGRSREHRIIPSHYIEQI 90
>AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.2 bits (45), Expect = 3.8
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = +3
Query: 78 DRRAEGRAGSRRIFPPQFKLQV 143
DRR GR+ RI P + Q+
Sbjct: 318 DRRERGRSREHRIIPSHYIEQI 339
>AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.2 bits (45), Expect = 3.8
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = +3
Query: 78 DRRAEGRAGSRRIFPPQFKLQV 143
DRR GR+ RI P + Q+
Sbjct: 318 DRRERGRSREHRIIPSHYIEQI 339
>AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.2 bits (45), Expect = 3.8
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = +3
Query: 78 DRRAEGRAGSRRIFPPQFKLQV 143
DRR GR+ RI P + Q+
Sbjct: 318 DRRERGRSREHRIIPSHYIEQI 339
>AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.2 bits (45), Expect = 3.8
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = +3
Query: 78 DRRAEGRAGSRRIFPPQFKLQV 143
DRR GR+ RI P + Q+
Sbjct: 318 DRRERGRSREHRIIPSHYIEQI 339
>AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.2 bits (45), Expect = 3.8
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = +3
Query: 78 DRRAEGRAGSRRIFPPQFKLQV 143
DRR GR+ RI P + Q+
Sbjct: 318 DRRERGRSREHRIIPSHYIEQI 339
>AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.2 bits (45), Expect = 3.8
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = +3
Query: 78 DRRAEGRAGSRRIFPPQFKLQV 143
DRR GR+ RI P + Q+
Sbjct: 318 DRRERGRSREHRIIPSHYIEQI 339
>AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex
determiner protein.
Length = 385
Score = 22.2 bits (45), Expect = 3.8
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = +3
Query: 78 DRRAEGRAGSRRIFPPQFKLQV 143
DRR GR+ RI P + Q+
Sbjct: 302 DRRERGRSREHRIIPSHYIEQI 323
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 22.2 bits (45), Expect = 3.8
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = +3
Query: 78 DRRAEGRAGSRRIFPPQFKLQV 143
DRR GR+ RI P + Q+
Sbjct: 318 DRRERGRSREHRIIPSHYIEQI 339
>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
protein.
Length = 1143
Score = 21.0 bits (42), Expect = 8.7
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = +1
Query: 208 ASIADRSKSGYKLNLLAS 261
ASIA K +LNLLAS
Sbjct: 837 ASIATNPKEQAQLNLLAS 854
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 134,105
Number of Sequences: 438
Number of extensions: 2679
Number of successful extensions: 23
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16626408
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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