Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20434
         (677 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF417489-1|AAN32667.1| 1445|Homo sapiens tensin 3 protein.             33   1.2  
AF378756-1|AAL11993.1| 1205|Homo sapiens tumor endothelial marke...    33   1.2  
AC073341-1|AAQ96841.1| 1205|Homo sapiens unknown protein.              33   1.2  
AB208995-1|BAD92232.1| 1271|Homo sapiens Tensin 3 variant protein.     33   1.2  
AY424441-1|AAR02915.1|   82|Homo sapiens immunoglobulin lambda l...    30   8.7  

>AF417489-1|AAN32667.1| 1445|Homo sapiens tensin 3 protein.
          Length = 1445

 Score = 32.7 bits (71), Expect = 1.2
 Identities = 18/44 (40%), Positives = 24/44 (54%)
 Frame = +3

Query: 114 RRGGSGQVSYKLEQALNLWGESSMGVSCPERQGCSAEVSGTRHV 245
           RRG S Q   +L+Q L+ +G    G S  E     ++ SGTRHV
Sbjct: 414 RRGLSAQEKAELDQLLSGFGLEDPGSSLKEMTDARSKYSGTRHV 457


>AF378756-1|AAL11993.1| 1205|Homo sapiens tumor endothelial marker 6
           protein.
          Length = 1205

 Score = 32.7 bits (71), Expect = 1.2
 Identities = 18/44 (40%), Positives = 24/44 (54%)
 Frame = +3

Query: 114 RRGGSGQVSYKLEQALNLWGESSMGVSCPERQGCSAEVSGTRHV 245
           RRG S Q   +L+Q L+ +G    G S  E     ++ SGTRHV
Sbjct: 174 RRGLSAQEKAELDQLLSGFGLEDPGSSLKEMTDARSKYSGTRHV 217


>AC073341-1|AAQ96841.1| 1205|Homo sapiens unknown protein.
          Length = 1205

 Score = 32.7 bits (71), Expect = 1.2
 Identities = 18/44 (40%), Positives = 24/44 (54%)
 Frame = +3

Query: 114 RRGGSGQVSYKLEQALNLWGESSMGVSCPERQGCSAEVSGTRHV 245
           RRG S Q   +L+Q L+ +G    G S  E     ++ SGTRHV
Sbjct: 174 RRGLSAQEKAELDQLLSGFGLEDPGSSLKEMTDARSKYSGTRHV 217


>AB208995-1|BAD92232.1| 1271|Homo sapiens Tensin 3 variant protein.
          Length = 1271

 Score = 32.7 bits (71), Expect = 1.2
 Identities = 18/44 (40%), Positives = 24/44 (54%)
 Frame = +3

Query: 114 RRGGSGQVSYKLEQALNLWGESSMGVSCPERQGCSAEVSGTRHV 245
           RRG S Q   +L+Q L+ +G    G S  E     ++ SGTRHV
Sbjct: 524 RRGLSAQEKAELDQLLSGFGLEDPGSSLKEMTDARSKYSGTRHV 567


>AY424441-1|AAR02915.1|   82|Homo sapiens immunoglobulin lambda
           light chain variable region protein.
          Length = 82

 Score = 29.9 bits (64), Expect = 8.7
 Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
 Frame = +3

Query: 474 PENASGICAGRATSYCVS-LLTDDEARR-CACWQSGPSG 584
           P+  SG  +G + S  +S L ++DEA   CA W   PSG
Sbjct: 41  PDRFSGSKSGASASLAISGLRSEDEADYYCAAWDDSPSG 79


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,824,771
Number of Sequences: 237096
Number of extensions: 2077247
Number of successful extensions: 7153
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6763
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7150
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7671262118
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)