Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20432
(748 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9GSV9 Cluster: Ornithine decarboxylase antizyme; n=1; ... 152 1e-35
UniRef50_Q95P51 Cluster: Ornithine decarboxylase antizyme; n=5; ... 57 5e-07
UniRef50_UPI00015B469C Cluster: PREDICTED: similar to Ornithine ... 56 1e-06
UniRef50_UPI0000D567E1 Cluster: PREDICTED: similar to Ornithine ... 53 7e-06
UniRef50_A7RKX2 Cluster: Predicted protein; n=1; Nematostella ve... 51 3e-05
UniRef50_P54361 Cluster: Ornithine decarboxylase antizyme; n=5; ... 50 6e-05
UniRef50_UPI0000E48ED3 Cluster: PREDICTED: similar to ornithine ... 50 8e-05
UniRef50_P54368 Cluster: Ornithine decarboxylase antizyme; n=30;... 50 8e-05
UniRef50_Q4SYJ9 Cluster: Chromosome undetermined SCAF12032, whol... 49 1e-04
UniRef50_O95190 Cluster: Ornithine decarboxylase antizyme 2; n=2... 48 2e-04
UniRef50_Q1PPZ9 Cluster: Ornithine decarboxylase antizyme 2; n=7... 46 7e-04
UniRef50_UPI0000F2C64E Cluster: PREDICTED: similar to ornithine ... 40 0.065
UniRef50_Q9UMX2 Cluster: Ornithine decarboxylase antizyme 3; n=1... 38 0.35
UniRef50_A5BMD2 Cluster: Putative uncharacterized protein; n=1; ... 35 2.4
UniRef50_A0MQ45 Cluster: Ornithine decarboxylase antizyme; n=2; ... 34 3.2
UniRef50_A2EXH0 Cluster: Major Facilitator Superfamily protein; ... 33 5.6
UniRef50_Q8WZL5 Cluster: Sin3 protein; n=1; Yarrowia lipolytica|... 33 5.6
UniRef50_Q4STY5 Cluster: Chromosome 10 SCAF14066, whole genome s... 33 7.5
UniRef50_Q919G4 Cluster: Putative coat protein; n=1; Blueberry r... 33 7.5
UniRef50_Q15QW2 Cluster: Glycosyl transferase, group 1; n=1; Pse... 33 9.9
>UniRef50_Q9GSV9 Cluster: Ornithine decarboxylase antizyme; n=1;
Bombyx mori|Rep: Ornithine decarboxylase antizyme -
Bombyx mori (Silk moth)
Length = 261
Score = 152 bits (368), Expect = 1e-35
Identities = 73/83 (87%), Positives = 74/83 (89%)
Frame = +2
Query: 11 DGQASPXXXXXXXXVVNKILERKDKHPVKIEFKIYLTENTVIRWEAVVHNNMMYLRVPGV 190
DGQASP VVNKILERKDKHPVKIEFKIYLTENTVIRWEAVVHNNMMYLRVPGV
Sbjct: 127 DGQASPQQLQLQQQVVNKILERKDKHPVKIEFKIYLTENTVIRWEAVVHNNMMYLRVPGV 186
Query: 191 LQSGSKDSFMLLLDFAEERLGLR 259
LQSGSKDSFMLLLDFAEERLG +
Sbjct: 187 LQSGSKDSFMLLLDFAEERLGCK 209
Score = 119 bits (287), Expect = 7e-26
Identities = 53/53 (100%), Positives = 53/53 (100%)
Frame = +1
Query: 256 KSCIICVLKSRPDRATLLRTFMFMGFQVLAPNSPLTPQHINNPNYIFLHYNMQ 414
KSCIICVLKSRPDRATLLRTFMFMGFQVLAPNSPLTPQHINNPNYIFLHYNMQ
Sbjct: 209 KSCIICVLKSRPDRATLLRTFMFMGFQVLAPNSPLTPQHINNPNYIFLHYNMQ 261
>UniRef50_Q95P51 Cluster: Ornithine decarboxylase antizyme; n=5;
Culicidae|Rep: Ornithine decarboxylase antizyme - Aedes
aegypti (Yellowfever mosquito)
Length = 240
Score = 56.8 bits (131), Expect = 5e-07
Identities = 24/53 (45%), Positives = 36/53 (67%), Gaps = 3/53 (5%)
Frame = +1
Query: 265 IICVLKSRPDRATLLRTFMFMGFQVLAPNSPLTPQHINNP---NYIFLHYNMQ 414
++C+ K R DR L+RTF F+GFQ ++P SPL P HI +Y+F+ YN++
Sbjct: 187 VLCIRKDRLDRPNLVRTFSFVGFQPVSPKSPLAPPHIEEQQKNDYLFMIYNIE 239
Score = 43.6 bits (98), Expect = 0.005
Identities = 23/69 (33%), Positives = 41/69 (59%), Gaps = 3/69 (4%)
Frame = +2
Query: 53 VVNKILERKDKHPVKIEFKIYLTENTVIRWEAVVH--NNMMYLRVPGVL-QSGSKDSFML 223
V+ ++L + P +I K+++T WE V + +N++Y+ +P + SK SF+
Sbjct: 115 VIQEVLNQPT--PTQISLKLFVTPQKYSVWETVFNPLDNILYVNLPSTMTHEASKHSFIS 172
Query: 224 LLDFAEERL 250
LL+FAEE+L
Sbjct: 173 LLEFAEEKL 181
>UniRef50_UPI00015B469C Cluster: PREDICTED: similar to Ornithine
decarboxylase antizyme (ODC-Az), partial; n=1; Nasonia
vitripennis|Rep: PREDICTED: similar to Ornithine
decarboxylase antizyme (ODC-Az), partial - Nasonia
vitripennis
Length = 121
Score = 55.6 bits (128), Expect = 1e-06
Identities = 25/59 (42%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
Frame = +2
Query: 77 KDKHPVKIEFKIYLTENTVIRWEAVVHNNMMYLRVPG-VLQSGSKDSFMLLLDFAEERL 250
K +++ F + LTE+T + WE VV +Y+RVP +L GSK+ F+ LL++AEE L
Sbjct: 9 KTNESLRLTFNLQLTESTSVEWETVVWRGCLYIRVPSCLLPEGSKEGFVSLLEYAEETL 67
Score = 52.0 bits (119), Expect = 2e-05
Identities = 22/46 (47%), Positives = 30/46 (65%)
Frame = +1
Query: 265 IICVLKSRPDRATLLRTFMFMGFQVLAPNSPLTPQHINNPNYIFLH 402
++C+ K R DRA L+RTFMF+GF VL P+ PL P + N L+
Sbjct: 73 VVCLRKDRTDRAMLVRTFMFLGFSVLPPDHPLVPPGSDTGNLYMLY 118
>UniRef50_UPI0000D567E1 Cluster: PREDICTED: similar to Ornithine
decarboxylase antizyme (ODC-Az); n=1; Tribolium
castaneum|Rep: PREDICTED: similar to Ornithine
decarboxylase antizyme (ODC-Az) - Tribolium castaneum
Length = 150
Score = 53.2 bits (122), Expect = 7e-06
Identities = 30/78 (38%), Positives = 45/78 (57%), Gaps = 3/78 (3%)
Frame = +1
Query: 190 PAVRQQGQLHAAPGFR*RASRLKSC--IICVLKS-RPDRATLLRTFMFMGFQVLAPNSPL 360
P V +G A A C ++ V +S RPDRA L+RTFMF+GF VL+P SPL
Sbjct: 74 PHVLPEGSREAFVALLEAAEEQLKCQHVVVVFESERPDRAMLVRTFMFLGFAVLSPTSPL 133
Query: 361 TPQHINNPNYIFLHYNMQ 414
P +++ ++ + YN++
Sbjct: 134 VPPSLSS-GHVCMLYNIE 150
Score = 36.7 bits (81), Expect = 0.61
Identities = 16/38 (42%), Positives = 27/38 (71%), Gaps = 1/38 (2%)
Frame = +2
Query: 140 WEAVVHNNMMYLRVPG-VLQSGSKDSFMLLLDFAEERL 250
W+AV+ +Y+ +P VL GS+++F+ LL+ AEE+L
Sbjct: 59 WDAVLRGQTLYIALPPHVLPEGSREAFVALLEAAEEQL 96
>UniRef50_A7RKX2 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 203
Score = 50.8 bits (116), Expect = 3e-05
Identities = 23/49 (46%), Positives = 33/49 (67%)
Frame = +1
Query: 268 ICVLKSRPDRATLLRTFMFMGFQVLAPNSPLTPQHINNPNYIFLHYNMQ 414
IC+ K+R DR L+RTFMFMGF+ + P L P+ N +YIF+ Y ++
Sbjct: 158 ICLRKAREDRVPLMRTFMFMGFETVVPGHFLCPK---NEDYIFMAYTIE 203
Score = 43.6 bits (98), Expect = 0.005
Identities = 20/51 (39%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Frame = +2
Query: 104 FKIYLTENTVIRWEAVVHNNMMYLRVP-GVLQSGSKDSFMLLLDFAEERLG 253
F + ++ V W A N +Y++VP G + GSK+ F+ LL++AEE+LG
Sbjct: 102 FHLKTGDHEVAEWSAAHTKNCLYVQVPEGEIPQGSKECFISLLEYAEEKLG 152
>UniRef50_P54361 Cluster: Ornithine decarboxylase antizyme; n=5;
Drosophila|Rep: Ornithine decarboxylase antizyme -
Drosophila melanogaster (Fruit fly)
Length = 254
Score = 50.0 bits (114), Expect = 6e-05
Identities = 26/69 (37%), Positives = 46/69 (66%), Gaps = 3/69 (4%)
Frame = +2
Query: 53 VVNKILERKDKHPVKIEFKIYLTENTVIRWEAVVH--NNMMYLRVPGVLQ-SGSKDSFML 223
V+ +IL+ PV+I K+++TE+ W +++ NN++Y+ +P L +GSK +F+
Sbjct: 131 VLRQILQHDQ--PVQITIKLHVTEDQYTNWNTILNPVNNLLYVALPKDLPPAGSKQTFIS 188
Query: 224 LLDFAEERL 250
LL+FAEE+L
Sbjct: 189 LLEFAEEKL 197
Score = 42.3 bits (95), Expect = 0.012
Identities = 21/48 (43%), Positives = 31/48 (64%), Gaps = 2/48 (4%)
Frame = +1
Query: 265 IICVLKSRPDRATLLRTFMFMGFQVLAPNSP-LTPQHIN-NPNYIFLH 402
++ + K +PDRA L+ F+FMGF+ L+ +P P IN N NY FL+
Sbjct: 203 VMVMPKDQPDRARLIEAFLFMGFEPLSRKAPQAPPAAINDNENYYFLY 250
>UniRef50_UPI0000E48ED3 Cluster: PREDICTED: similar to ornithine
decarboxylase antizyme large isoform; n=1;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
ornithine decarboxylase antizyme large isoform -
Strongylocentrotus purpuratus
Length = 194
Score = 49.6 bits (113), Expect = 8e-05
Identities = 21/53 (39%), Positives = 37/53 (69%), Gaps = 1/53 (1%)
Frame = +2
Query: 98 IEFKIYLTENTVIRWEAVVHNNMMYLRVPGV-LQSGSKDSFMLLLDFAEERLG 253
I F +LT+N +++WE+++ + +Y+++P L G +DS + LLD AEE+LG
Sbjct: 92 IRFLHHLTDNLLVKWESILLESRLYIQLPETSLHQGGRDSLVELLDIAEEQLG 144
>UniRef50_P54368 Cluster: Ornithine decarboxylase antizyme; n=30;
Euteleostomi|Rep: Ornithine decarboxylase antizyme -
Homo sapiens (Human)
Length = 228
Score = 49.6 bits (113), Expect = 8e-05
Identities = 23/55 (41%), Positives = 32/55 (58%)
Frame = +1
Query: 250 RLKSCIICVLKSRPDRATLLRTFMFMGFQVLAPNSPLTPQHINNPNYIFLHYNMQ 414
R IC K+R DRA LLRTF F+GF+++ P PL P+ P+ F+ Y +
Sbjct: 168 RADHVFICFHKNREDRAALLRTFSFLGFEIVRPGHPLVPK---RPDACFMAYTFE 219
Score = 48.0 bits (109), Expect = 2e-04
Identities = 26/66 (39%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Frame = +2
Query: 56 VNKILERKDKHPVKIEFKIYLTENTVIRWEAVVHNNMMYLRVPG-VLQSGSKDSFMLLLD 232
V + L DK + + + LT+ I W V+ +Y+ +PG L GSKDSF +LL+
Sbjct: 103 VTEELTSNDKTRI-LNVQSRLTDAKRINWRTVLSGGSLYIEIPGGALPEGSKDSFAVLLE 161
Query: 233 FAEERL 250
FAEE+L
Sbjct: 162 FAEEQL 167
>UniRef50_Q4SYJ9 Cluster: Chromosome undetermined SCAF12032, whole
genome shotgun sequence; n=1; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF12032,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 184
Score = 49.2 bits (112), Expect = 1e-04
Identities = 22/49 (44%), Positives = 32/49 (65%)
Frame = +1
Query: 268 ICVLKSRPDRATLLRTFMFMGFQVLAPNSPLTPQHINNPNYIFLHYNMQ 414
IC K+R DRA LLRTF F+GF+++ P PL P + P+ F+ Y ++
Sbjct: 132 ICFHKNRDDRAPLLRTFSFLGFEIVRPGHPLIP---SRPDAFFMAYGIE 177
Score = 43.2 bits (97), Expect = 0.007
Identities = 20/38 (52%), Positives = 26/38 (68%), Gaps = 1/38 (2%)
Frame = +2
Query: 140 WEAVVHNNMMYLRVP-GVLQSGSKDSFMLLLDFAEERL 250
W A + +Y+ +P G L GSKDSF LLL+FAEE+L
Sbjct: 88 WRAALKGRGLYVEIPPGSLPEGSKDSFALLLEFAEEQL 125
>UniRef50_O95190 Cluster: Ornithine decarboxylase antizyme 2; n=26;
Gnathostomata|Rep: Ornithine decarboxylase antizyme 2 -
Homo sapiens (Human)
Length = 189
Score = 48.4 bits (110), Expect = 2e-04
Identities = 26/84 (30%), Positives = 43/84 (51%), Gaps = 1/84 (1%)
Frame = +2
Query: 2 GTSDGQASPXXXXXXXXVVNKILERKDKHPVKIEFKIYLTENTVIRWEAVVHNNMMYLRV 181
G D S V + L D P + F+ +TE V W+AV+ + +++ +
Sbjct: 47 GGRDPSLSALIYKDEKLTVTQDLPVNDGKPHIVHFQYEVTEVKVSSWDAVLSSQSLFVEI 106
Query: 182 P-GVLQSGSKDSFMLLLDFAEERL 250
P G+L GSK+ + LL+FAEE++
Sbjct: 107 PDGLLADGSKEGLLALLEFAEEKM 130
Score = 46.4 bits (105), Expect = 7e-04
Identities = 21/51 (41%), Positives = 31/51 (60%)
Frame = +1
Query: 268 ICVLKSRPDRATLLRTFMFMGFQVLAPNSPLTPQHINNPNYIFLHYNMQ*N 420
IC K R DRA LL+TF F+GF+++ P P P + P+ +F+ Y + N
Sbjct: 137 ICFRKGREDRAPLLKTFSFLGFEIVRPGHPCVP---SRPDVMFMVYPLDQN 184
>UniRef50_Q1PPZ9 Cluster: Ornithine decarboxylase antizyme 2; n=7;
Euteleostomi|Rep: Ornithine decarboxylase antizyme 2 -
Xenopus laevis (African clawed frog)
Length = 186
Score = 46.4 bits (105), Expect = 7e-04
Identities = 20/48 (41%), Positives = 30/48 (62%)
Frame = +1
Query: 268 ICVLKSRPDRATLLRTFMFMGFQVLAPNSPLTPQHINNPNYIFLHYNM 411
IC KSR DR +LL+TF F+GF+++ P P P P+ +F+ Y +
Sbjct: 135 ICFRKSREDRGSLLKTFSFLGFEIVRPGHPCVPP---RPDVMFMVYTL 179
Score = 41.1 bits (92), Expect = 0.028
Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Frame = +2
Query: 89 PVKIEFKIYLTENTVIRWEAVVHNNMMYLRVP-GVLQSGSKDSFMLLLDFAEERLGLRVA 265
P F+ +TE W A+ N +++ +P G L GSK+ + LL+FAEE++ +
Sbjct: 74 PHLFHFQYKVTEVKESSWNAIWSNQSLFVEIPEGELADGSKEGLLALLEFAEEKMEMNYV 133
Query: 266 SSAF 277
F
Sbjct: 134 FICF 137
>UniRef50_UPI0000F2C64E Cluster: PREDICTED: similar to ornithine
decarboxylase antizyme; n=1; Monodelphis domestica|Rep:
PREDICTED: similar to ornithine decarboxylase antizyme -
Monodelphis domestica
Length = 290
Score = 39.9 bits (89), Expect = 0.065
Identities = 18/41 (43%), Positives = 28/41 (68%), Gaps = 1/41 (2%)
Frame = +2
Query: 125 NTVIRWEAVVHNNMMYLRVP-GVLQSGSKDSFMLLLDFAEE 244
+ + W+ V+ NN +Y +P G L GSKDSF++LL+ AE+
Sbjct: 191 DAIFNWKGVL-NNSLYTEIPSGTLPEGSKDSFIVLLESAEQ 230
>UniRef50_Q9UMX2 Cluster: Ornithine decarboxylase antizyme 3; n=15;
Eutheria|Rep: Ornithine decarboxylase antizyme 3 - Homo
sapiens (Human)
Length = 187
Score = 37.5 bits (83), Expect = 0.35
Identities = 27/91 (29%), Positives = 42/91 (46%)
Frame = +1
Query: 166 DVPPRARGPAVRQQGQLHAAPGFR*RASRLKSCIICVLKSRPDRATLLRTFMFMGFQVLA 345
D+P +A R+ L A + + + S + R DR LLR F +MGF+V+
Sbjct: 99 DIPYQALDQGNRES--LTATLEYVEEKTNVDSVFVNFQNDRNDRGALLRAFSYMGFEVVR 156
Query: 346 PNSPLTPQHINNPNYIFLHYNMQ*NFIHKQS 438
P+ P P N IF+ Y ++ + H S
Sbjct: 157 PDHPALPP---LDNVIFMVYPLERDVGHLPS 184
>UniRef50_A5BMD2 Cluster: Putative uncharacterized protein; n=1; Vitis
vinifera|Rep: Putative uncharacterized protein - Vitis
vinifera (Grape)
Length = 1496
Score = 34.7 bits (76), Expect = 2.4
Identities = 15/46 (32%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Frame = -1
Query: 238 SEIQEQHEAVLAAGLQDPGHAEVHHVVVHN-SLPTYNCVLGEINLE 104
+ I E + LA+ + P A VHH+++ + S+PTY C++ + L+
Sbjct: 1146 NNIVEYEASTLASMIDIPADATVHHLLIESRSVPTYCCLINDTELD 1191
>UniRef50_A0MQ45 Cluster: Ornithine decarboxylase antizyme; n=2;
Danio rerio|Rep: Ornithine decarboxylase antizyme -
Danio rerio (Zebrafish) (Brachydanio rerio)
Length = 186
Score = 34.3 bits (75), Expect = 3.2
Identities = 11/34 (32%), Positives = 23/34 (67%)
Frame = +1
Query: 250 RLKSCIICVLKSRPDRATLLRTFMFMGFQVLAPN 351
++ + +K+RPD+ L RTF ++GF+++ P+
Sbjct: 128 KISHVFVWFMKNRPDKLLLTRTFFYLGFELVKPD 161
>UniRef50_A2EXH0 Cluster: Major Facilitator Superfamily protein;
n=1; Trichomonas vaginalis G3|Rep: Major Facilitator
Superfamily protein - Trichomonas vaginalis G3
Length = 423
Score = 33.5 bits (73), Expect = 5.6
Identities = 16/75 (21%), Positives = 35/75 (46%)
Frame = +1
Query: 355 PLTPQHINNPNYIFLHYNMQ*NFIHKQSFFSGEKLTKKNNFLIFSTKIIVFFRMATLDYP 534
P T H+++ ++ ++ +H +F +GEKL K + IF+ ++ YP
Sbjct: 251 PFTSDHLHSRKWVLFAISVLGGAVHLWAFIAGEKLQKWAVYTIFAIIGFTTLPATSVCYP 310
Query: 535 RLVQVKHLEILSKSV 579
L + H+ + ++
Sbjct: 311 LLREYFHVSVAGSAI 325
>UniRef50_Q8WZL5 Cluster: Sin3 protein; n=1; Yarrowia lipolytica|Rep:
Sin3 protein - Yarrowia lipolytica (Candida lipolytica)
Length = 1527
Score = 33.5 bits (73), Expect = 5.6
Identities = 19/48 (39%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Frame = +1
Query: 421 FIHKQSFFSGEKLTKKNNFLIFS-TKIIVFFRMATLDYPRLVQVKHLE 561
+IH ++ + K++ F +F+ T I VFFR+ Y RLV+VK LE
Sbjct: 1125 WIHTETPLNTSTPGKRHRFNLFANTTIYVFFRLLQTLYQRLVEVKALE 1172
>UniRef50_Q4STY5 Cluster: Chromosome 10 SCAF14066, whole genome
shotgun sequence; n=2; Clupeocephala|Rep: Chromosome 10
SCAF14066, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 1645
Score = 33.1 bits (72), Expect = 7.5
Identities = 19/45 (42%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = +3
Query: 243 SVSA*ELHHLRFEESSRPRYPAAHLHVHGIPS-SGSEFAADPTAH 374
S A EL LR EESSRP +H PS + +EF+ +P+ H
Sbjct: 986 SALAKELRELRVEESSRPPVKVKVFFMHDDPSHTHTEFSPNPSKH 1030
>UniRef50_Q919G4 Cluster: Putative coat protein; n=1; Blueberry red
ringspot virus|Rep: Putative coat protein - Blueberry
red ringspot virus
Length = 486
Score = 33.1 bits (72), Expect = 7.5
Identities = 14/41 (34%), Positives = 25/41 (60%)
Frame = +1
Query: 469 NNFLIFSTKIIVFFRMATLDYPRLVQVKHLEILSKSVFKMH 591
N +LI+ T +VF + +D P + +K+LEIL + K++
Sbjct: 155 NKYLIYKTSGVVFNYIVDIDIPNISSMKNLEILEEIATKIY 195
>UniRef50_Q15QW2 Cluster: Glycosyl transferase, group 1; n=1;
Pseudoalteromonas atlantica T6c|Rep: Glycosyl
transferase, group 1 - Pseudoalteromonas atlantica
(strain T6c / BAA-1087)
Length = 673
Score = 32.7 bits (71), Expect = 9.9
Identities = 14/47 (29%), Positives = 26/47 (55%)
Frame = +1
Query: 256 KSCIICVLKSRPDRATLLRTFMFMGFQVLAPNSPLTPQHINNPNYIF 396
+SC++ + R + L +T MGF++ P+ + H++NPN F
Sbjct: 7 RSCVVVLGMHRSGTSALAKTICDMGFEL--PSDSMPAHHVDNPNGYF 51
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 632,043,457
Number of Sequences: 1657284
Number of extensions: 11771529
Number of successful extensions: 29626
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 28621
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29610
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 61323318355
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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