Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20432
(748 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U29529-1|AAB49330.1| 186|Drosophila melanogaster guf protein. 50 3e-06
AF038597-1|AAC97538.1| 254|Drosophila melanogaster ornithine de... 50 3e-06
AE013599-1406|AAF58570.2| 248|Drosophila melanogaster CG16747-P... 50 3e-06
AE013599-1405|AAF58567.2| 270|Drosophila melanogaster CG16747-P... 50 3e-06
AE013599-1404|AAF58569.2| 254|Drosophila melanogaster CG16747-P... 50 3e-06
>U29529-1|AAB49330.1| 186|Drosophila melanogaster guf protein.
Length = 186
Score = 50.0 bits (114), Expect = 3e-06
Identities = 26/69 (37%), Positives = 46/69 (66%), Gaps = 3/69 (4%)
Frame = +2
Query: 53 VVNKILERKDKHPVKIEFKIYLTENTVIRWEAVVH--NNMMYLRVPGVLQ-SGSKDSFML 223
V+ +IL+ PV+I K+++TE+ W +++ NN++Y+ +P L +GSK +F+
Sbjct: 63 VLRQILQHDQ--PVQITIKLHVTEDQYTNWNTILNPVNNLLYVALPKDLPPAGSKQTFIS 120
Query: 224 LLDFAEERL 250
LL+FAEE+L
Sbjct: 121 LLEFAEEKL 129
Score = 42.3 bits (95), Expect = 7e-04
Identities = 21/48 (43%), Positives = 31/48 (64%), Gaps = 2/48 (4%)
Frame = +1
Query: 265 IICVLKSRPDRATLLRTFMFMGFQVLAPNSP-LTPQHIN-NPNYIFLH 402
++ + K +PDRA L+ F+FMGF+ L+ +P P IN N NY FL+
Sbjct: 135 VMVMPKDQPDRARLIEAFLFMGFEPLSRKAPQAPPAAINDNENYYFLY 182
>AF038597-1|AAC97538.1| 254|Drosophila melanogaster ornithine
decarboxylase antizyme protein.
Length = 254
Score = 50.0 bits (114), Expect = 3e-06
Identities = 26/69 (37%), Positives = 46/69 (66%), Gaps = 3/69 (4%)
Frame = +2
Query: 53 VVNKILERKDKHPVKIEFKIYLTENTVIRWEAVVH--NNMMYLRVPGVLQ-SGSKDSFML 223
V+ +IL+ PV+I K+++TE+ W +++ NN++Y+ +P L +GSK +F+
Sbjct: 131 VLRQILQHDQ--PVQITIKLHVTEDQYTNWNTILNPVNNLLYVALPKDLPPAGSKQTFIS 188
Query: 224 LLDFAEERL 250
LL+FAEE+L
Sbjct: 189 LLEFAEEKL 197
Score = 42.3 bits (95), Expect = 7e-04
Identities = 21/48 (43%), Positives = 31/48 (64%), Gaps = 2/48 (4%)
Frame = +1
Query: 265 IICVLKSRPDRATLLRTFMFMGFQVLAPNSP-LTPQHIN-NPNYIFLH 402
++ + K +PDRA L+ F+FMGF+ L+ +P P IN N NY FL+
Sbjct: 203 VMVMPKDQPDRARLIEAFLFMGFEPLSRKAPQAPPAAINDNENYYFLY 250
>AE013599-1406|AAF58570.2| 248|Drosophila melanogaster CG16747-PB,
isoform B protein.
Length = 248
Score = 50.0 bits (114), Expect = 3e-06
Identities = 26/69 (37%), Positives = 46/69 (66%), Gaps = 3/69 (4%)
Frame = +2
Query: 53 VVNKILERKDKHPVKIEFKIYLTENTVIRWEAVVH--NNMMYLRVPGVLQ-SGSKDSFML 223
V+ +IL+ PV+I K+++TE+ W +++ NN++Y+ +P L +GSK +F+
Sbjct: 125 VLRQILQHDQ--PVQITIKLHVTEDQYTNWNTILNPVNNLLYVALPKDLPPAGSKQTFIS 182
Query: 224 LLDFAEERL 250
LL+FAEE+L
Sbjct: 183 LLEFAEEKL 191
Score = 42.3 bits (95), Expect = 7e-04
Identities = 21/48 (43%), Positives = 31/48 (64%), Gaps = 2/48 (4%)
Frame = +1
Query: 265 IICVLKSRPDRATLLRTFMFMGFQVLAPNSP-LTPQHIN-NPNYIFLH 402
++ + K +PDRA L+ F+FMGF+ L+ +P P IN N NY FL+
Sbjct: 197 VMVMPKDQPDRARLIEAFLFMGFEPLSRKAPQAPPAAINDNENYYFLY 244
>AE013599-1405|AAF58567.2| 270|Drosophila melanogaster CG16747-PC,
isoform C protein.
Length = 270
Score = 50.0 bits (114), Expect = 3e-06
Identities = 26/69 (37%), Positives = 46/69 (66%), Gaps = 3/69 (4%)
Frame = +2
Query: 53 VVNKILERKDKHPVKIEFKIYLTENTVIRWEAVVH--NNMMYLRVPGVLQ-SGSKDSFML 223
V+ +IL+ PV+I K+++TE+ W +++ NN++Y+ +P L +GSK +F+
Sbjct: 147 VLRQILQHDQ--PVQITIKLHVTEDQYTNWNTILNPVNNLLYVALPKDLPPAGSKQTFIS 204
Query: 224 LLDFAEERL 250
LL+FAEE+L
Sbjct: 205 LLEFAEEKL 213
Score = 42.3 bits (95), Expect = 7e-04
Identities = 21/48 (43%), Positives = 31/48 (64%), Gaps = 2/48 (4%)
Frame = +1
Query: 265 IICVLKSRPDRATLLRTFMFMGFQVLAPNSP-LTPQHIN-NPNYIFLH 402
++ + K +PDRA L+ F+FMGF+ L+ +P P IN N NY FL+
Sbjct: 219 VMVMPKDQPDRARLIEAFLFMGFEPLSRKAPQAPPAAINDNENYYFLY 266
>AE013599-1404|AAF58569.2| 254|Drosophila melanogaster CG16747-PA,
isoform A protein.
Length = 254
Score = 50.0 bits (114), Expect = 3e-06
Identities = 26/69 (37%), Positives = 46/69 (66%), Gaps = 3/69 (4%)
Frame = +2
Query: 53 VVNKILERKDKHPVKIEFKIYLTENTVIRWEAVVH--NNMMYLRVPGVLQ-SGSKDSFML 223
V+ +IL+ PV+I K+++TE+ W +++ NN++Y+ +P L +GSK +F+
Sbjct: 131 VLRQILQHDQ--PVQITIKLHVTEDQYTNWNTILNPVNNLLYVALPKDLPPAGSKQTFIS 188
Query: 224 LLDFAEERL 250
LL+FAEE+L
Sbjct: 189 LLEFAEEKL 197
Score = 42.3 bits (95), Expect = 7e-04
Identities = 21/48 (43%), Positives = 31/48 (64%), Gaps = 2/48 (4%)
Frame = +1
Query: 265 IICVLKSRPDRATLLRTFMFMGFQVLAPNSP-LTPQHIN-NPNYIFLH 402
++ + K +PDRA L+ F+FMGF+ L+ +P P IN N NY FL+
Sbjct: 203 VMVMPKDQPDRARLIEAFLFMGFEPLSRKAPQAPPAAINDNENYYFLY 250
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,675,029
Number of Sequences: 53049
Number of extensions: 560554
Number of successful extensions: 1518
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1410
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1516
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3396574665
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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