Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20430
         (811 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    24   1.2  
DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        24   1.6  
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    23   2.2  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    23   2.2  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    23   2.9  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    22   6.6  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    21   8.8  
AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.        21   8.8  

>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +3

Query: 462  YFPSYFILVWNVLCNYVW 515
            +FPS   + WNVL N V+
Sbjct: 1116 FFPSKIRICWNVLLNCVY 1133


>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 10/18 (55%), Positives = 10/18 (55%)
 Frame = -2

Query: 447 KSVDNINVSSCKSNTGAP 394
           KS DN  VS C S  G P
Sbjct: 198 KSTDNEGVSDCDSEPGIP 215


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = -2

Query: 675 TTYSSKVARNRPLLPWSIPVQGYHYSP 595
           TT +S    + PL+ ++I    Y Y+P
Sbjct: 14  TTTTSSALNSTPLIEFNISTSNYLYTP 40


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = -2

Query: 675 TTYSSKVARNRPLLPWSIPVQGYHYSP 595
           TT +S    + PL+ ++I    Y Y+P
Sbjct: 14  TTTTSSALNSTPLIEFNISTSNYLYTP 40


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 11/33 (33%), Positives = 18/33 (54%)
 Frame = +2

Query: 188 ALLCGQRIFFLYFGTNIHCRITESFYLSAPNDI 286
           +LLC ++IF     TN+    T + + SA  D+
Sbjct: 74  SLLCTEKIFLFAIYTNLSILTTVTIFKSAFWDV 106


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 8/19 (42%), Positives = 14/19 (73%)
 Frame = +1

Query: 106 NYVE*QYQVLLHVFTCLVL 162
           NY+   YQ+LL++ T ++L
Sbjct: 157 NYIHFFYQLLLYLITDMIL 175


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 21.4 bits (43), Expect = 8.8
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = +1

Query: 541 VVEMLVNNAMLTVCGAW 591
           +V  L  NA   VCG W
Sbjct: 216 LVNSLYQNATRKVCGVW 232


>AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.
          Length = 556

 Score = 21.4 bits (43), Expect = 8.8
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = -3

Query: 227 QNIKRRSFAHIVERPS 180
           Q  +RR+F  I+E+P+
Sbjct: 57  QQARRRAFVKIIEQPA 72


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 180,420
Number of Sequences: 336
Number of extensions: 3914
Number of successful extensions: 12
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22102797
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)