Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20430
         (811 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D13435-1|BAA02697.1|  219|Homo sapiens phosphatidyl-inositol-gly...    64   6e-10
CR457000-1|CAG33281.1|  219|Homo sapiens PIGF protein.                 64   6e-10
BC029408-1|AAH29408.1|  219|Homo sapiens phosphatidylinositol gl...    64   6e-10
AC018682-3|AAY14835.1|  219|Homo sapiens unknown protein.              64   6e-10
BC021725-1|AAH21725.1|  206|Homo sapiens phosphatidylinositol gl...    43   0.002
M81780-3|AAA75010.1|  102|Homo sapiens protein ( Homo sapiens ac...    31   4.9  

>D13435-1|BAA02697.1|  219|Homo sapiens phosphatidyl-inositol-glycan
           class F protein.
          Length = 219

 Score = 64.1 bits (149), Expect = 6e-10
 Identities = 29/65 (44%), Positives = 40/65 (61%), Gaps = 4/65 (6%)
 Frame = +1

Query: 517 VKSFARDTVVEMLVNNAMLTVC----GAWLGAVVIPLDWNTPWQQWPIPCYLGAIGGYLL 684
           ++ F+R+ V  +  N+  +T      GAWLGA+ IPLDW  PWQ WPI C LGA  GY+ 
Sbjct: 139 LRVFSRNGVTSIWENSLQITTISSFVGAWLGALPIPLDWERPWQVWPISCTLGATFGYVA 198

Query: 685 ANVLT 699
             V++
Sbjct: 199 GLVIS 203


>CR457000-1|CAG33281.1|  219|Homo sapiens PIGF protein.
          Length = 219

 Score = 64.1 bits (149), Expect = 6e-10
 Identities = 29/65 (44%), Positives = 40/65 (61%), Gaps = 4/65 (6%)
 Frame = +1

Query: 517 VKSFARDTVVEMLVNNAMLTVC----GAWLGAVVIPLDWNTPWQQWPIPCYLGAIGGYLL 684
           ++ F+R+ V  +  N+  +T      GAWLGA+ IPLDW  PWQ WPI C LGA  GY+ 
Sbjct: 139 LRVFSRNGVTSIWENSLQITTISSFVGAWLGALPIPLDWERPWQVWPISCTLGATFGYVA 198

Query: 685 ANVLT 699
             V++
Sbjct: 199 GLVIS 203


>BC029408-1|AAH29408.1|  219|Homo sapiens phosphatidylinositol
           glycan anchor biosynthesis, class F protein.
          Length = 219

 Score = 64.1 bits (149), Expect = 6e-10
 Identities = 29/65 (44%), Positives = 40/65 (61%), Gaps = 4/65 (6%)
 Frame = +1

Query: 517 VKSFARDTVVEMLVNNAMLTVC----GAWLGAVVIPLDWNTPWQQWPIPCYLGAIGGYLL 684
           ++ F+R+ V  +  N+  +T      GAWLGA+ IPLDW  PWQ WPI C LGA  GY+ 
Sbjct: 139 LRVFSRNGVTSIWENSLQITTISSFVGAWLGALPIPLDWERPWQVWPISCTLGATFGYVA 198

Query: 685 ANVLT 699
             V++
Sbjct: 199 GLVIS 203


>AC018682-3|AAY14835.1|  219|Homo sapiens unknown protein.
          Length = 219

 Score = 64.1 bits (149), Expect = 6e-10
 Identities = 29/65 (44%), Positives = 40/65 (61%), Gaps = 4/65 (6%)
 Frame = +1

Query: 517 VKSFARDTVVEMLVNNAMLTVC----GAWLGAVVIPLDWNTPWQQWPIPCYLGAIGGYLL 684
           ++ F+R+ V  +  N+  +T      GAWLGA+ IPLDW  PWQ WPI C LGA  GY+ 
Sbjct: 139 LRVFSRNGVTSIWENSLQITTISSFVGAWLGALPIPLDWERPWQVWPISCTLGATFGYVA 198

Query: 685 ANVLT 699
             V++
Sbjct: 199 GLVIS 203


>BC021725-1|AAH21725.1|  206|Homo sapiens phosphatidylinositol
           glycan anchor biosynthesis, class F protein.
          Length = 206

 Score = 42.7 bits (96), Expect = 0.002
 Identities = 19/44 (43%), Positives = 27/44 (61%), Gaps = 4/44 (9%)
 Frame = +1

Query: 517 VKSFARDTVVEMLVNNAMLTVC----GAWLGAVVIPLDWNTPWQ 636
           ++ F+R+ V  +  N+  +T      GAWLGA+ IPLDW  PWQ
Sbjct: 139 LRVFSRNGVTSIWENSLQITTISSFVGAWLGALPIPLDWERPWQ 182


>M81780-3|AAA75010.1|  102|Homo sapiens protein ( Homo sapiens acid
           sphingomyelinase (SMPD1) gene, complete cds, ORF's 1-3,
           complete cds's. ).
          Length = 102

 Score = 31.1 bits (67), Expect = 4.9
 Identities = 16/51 (31%), Positives = 25/51 (49%)
 Frame = -3

Query: 635 CHGVFQSRGITTAPSHAPHTVSMALFTSISTTVSLAKLFTPNIVA*NIPHQ 483
           CH + Q   ++ A  H P   + AL ++ ST       F+P ++A N P Q
Sbjct: 21  CHPLHQGCILSPAHQHQPQPPAPALLSASSTAAPSVLTFSPRLMAVNRPLQ 71


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,527,629
Number of Sequences: 237096
Number of extensions: 2301864
Number of successful extensions: 4149
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 4016
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4145
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10036353240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)