Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20422
(773 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI00015B4C88 Cluster: PREDICTED: similar to helicase; ... 101 3e-20
UniRef50_Q5T4D9 Cluster: SWI/SNF related, matrix associated, act... 99 1e-19
UniRef50_P25439 Cluster: Homeotic gene regulator; n=23; Bilateri... 97 3e-19
UniRef50_A7RK66 Cluster: Predicted protein; n=1; Nematostella ve... 97 4e-19
UniRef50_A5D6X0 Cluster: SMARCA4 protein; n=36; Deuterostomia|Re... 97 4e-19
UniRef50_P51532 Cluster: Probable global transcription activator... 97 4e-19
UniRef50_Q22944 Cluster: Putative uncharacterized protein; n=1; ... 50 6e-05
UniRef50_Q4PFD0 Cluster: Putative uncharacterized protein; n=1; ... 42 0.017
UniRef50_A2FSS0 Cluster: SNF2 family N-terminal domain containin... 34 3.4
UniRef50_A6NLJ0 Cluster: Uncharacterized protein ENSP00000369755... 34 3.4
UniRef50_A3RVT8 Cluster: VgrG protein; n=2; Ralstonia solanacear... 34 4.5
UniRef50_UPI0000EBCB5D Cluster: PREDICTED: similar to SMARCA4 is... 33 6.0
UniRef50_UPI0000DD836D Cluster: PREDICTED: hypothetical protein;... 33 6.0
UniRef50_Q82H40 Cluster: Putative acyl-CoA oxidase; n=1; Strepto... 33 6.0
UniRef50_Q5CVY6 Cluster: Brahma like protein with a HSA domain, ... 33 6.0
UniRef50_Q82HF3 Cluster: Putative uncharacterized protein; n=2; ... 33 7.9
UniRef50_Q59164 Cluster: Sialidase; n=2; Actinomyces viscosus|Re... 33 7.9
UniRef50_Q19079 Cluster: Dumpy : shorter than wild-type protein ... 33 7.9
UniRef50_Q17166 Cluster: Cuticular collagen Bmcol-2; n=1; Brugia... 33 7.9
>UniRef50_UPI00015B4C88 Cluster: PREDICTED: similar to helicase; n=1;
Nasonia vitripennis|Rep: PREDICTED: similar to helicase -
Nasonia vitripennis
Length = 2220
Score = 101 bits (241), Expect = 3e-20
Identities = 50/85 (58%), Positives = 58/85 (68%)
Frame = +3
Query: 255 RALRVINFQKQLRSEILGQVRRDTTLETAVNIKAYKRTKRQGLREARATXXXXXXXXXXX 434
R LRV++FQ+QLRSEIL RRDTTLET VN+KAYKR KRQGLRE+RAT
Sbjct: 1083 RMLRVLDFQRQLRSEILSSTRRDTTLETTVNMKAYKRAKRQGLRESRATEKLEKQQKLEA 1142
Query: 435 XXXXXXXHQEFLQTVLQHVKDFKEY 509
HQEF+ +VLQH KD KE+
Sbjct: 1143 ERKRKQKHQEFITSVLQHGKDLKEF 1167
Score = 91.9 bits (218), Expect = 2e-17
Identities = 47/83 (56%), Positives = 55/83 (66%)
Frame = +2
Query: 509 HRNNLAKTARINKSIMNYHANAXXXXXXXXXXXXXXXMRG*WQKTKKVTVN*FDQKKDKR 688
HRNN+AK +R+NK+IMNYHANA MR + ++ DQKKDKR
Sbjct: 1168 HRNNIAKLSRLNKAIMNYHANAEREQKKEQERIEKERMRRLMAEDEEGYRKLIDQKKDKR 1227
Query: 689 LAFLLSQTDEYIASLTEMVKQHK 757
LAFLLSQTDEYI +LTEMVKQHK
Sbjct: 1228 LAFLLSQTDEYIGNLTEMVKQHK 1250
Score = 57.6 bits (133), Expect = 3e-07
Identities = 33/86 (38%), Positives = 42/86 (48%), Gaps = 5/86 (5%)
Frame = +1
Query: 13 GPAPLRPSAPGA-----PGTPQTQQLPGAKQNRVTTMPKPVGIDPVQILXXXXXXXXXXX 177
GP L P P P Q PG+K NRVTT+ +P G+DP+ IL
Sbjct: 997 GPPRLGPPGPQQQQQQQPHPQQQGPQPGSKTNRVTTVARPCGVDPLHILHERESRVNQRI 1056
Query: 178 XXXXXXLSNLPANMPDDLRLQAQIEL 255
L +P N+P++LR QAQIEL
Sbjct: 1057 TLRMQQLGYVPPNLPEELRTQAQIEL 1082
>UniRef50_Q5T4D9 Cluster: SWI/SNF related, matrix associated, actin
dependent regulator of chromatin, subfamily a, member 2;
n=9; Euteleostomi|Rep: SWI/SNF related, matrix
associated, actin dependent regulator of chromatin,
subfamily a, member 2 - Homo sapiens (Human)
Length = 559
Score = 99.1 bits (236), Expect = 1e-19
Identities = 47/85 (55%), Positives = 59/85 (69%)
Frame = +3
Query: 255 RALRVINFQKQLRSEILGQVRRDTTLETAVNIKAYKRTKRQGLREARATXXXXXXXXXXX 434
+ALR++NFQ+QLR E++ +RRDTTLETA+N KAYKR+KRQ LREAR T
Sbjct: 381 KALRLLNFQRQLRQEVVACMRRDTTLETALNSKAYKRSKRQTLREARMTEKLEKQQKIEQ 440
Query: 435 XXXXXXXHQEFLQTVLQHVKDFKEY 509
HQE+L ++LQH KDFKEY
Sbjct: 441 ERKRRQKHQEYLNSILQHAKDFKEY 465
Score = 63.7 bits (148), Expect = 5e-09
Identities = 32/88 (36%), Positives = 49/88 (55%)
Frame = +2
Query: 497 FQGIHRNNLAKTARINKSIMNYHANAXXXXXXXXXXXXXXXMRG*WQKTKKVTVN*FDQK 676
F+ HR+ K +++K++ +HAN MR + ++ DQK
Sbjct: 462 FKEYHRSVAGKIQKLSKAVATWHANTEREQKKETERIEKERMRRLMAEDEEGYRKLIDQK 521
Query: 677 KDKRLAFLLSQTDEYIASLTEMVKQHKQ 760
KD+RLA+LL QTDEY+A+LT +V +HKQ
Sbjct: 522 KDRRLAYLLQQTDEYVANLTNLVWEHKQ 549
Score = 53.6 bits (123), Expect = 5e-06
Identities = 29/77 (37%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Frame = +1
Query: 31 PSAPG-APGTPQTQQLPGAKQNRVTTMPKPVGIDPVQILXXXXXXXXXXXXXXXXXLSNL 207
PS P APG P KQ+R++ + KP G+DPV+IL L NL
Sbjct: 305 PSVPQPAPGQPSPVLQLQQKQSRISPIQKPQGLDPVEILQEREYRLQARIAHRIQELENL 364
Query: 208 PANMPDDLRLQAQIELE 258
P ++P DLR +A +EL+
Sbjct: 365 PGSLPPDLRTKATVELK 381
>UniRef50_P25439 Cluster: Homeotic gene regulator; n=23;
Bilateria|Rep: Homeotic gene regulator - Drosophila
melanogaster (Fruit fly)
Length = 1638
Score = 97.5 bits (232), Expect = 3e-19
Identities = 50/85 (58%), Positives = 56/85 (65%)
Frame = +3
Query: 255 RALRVINFQKQLRSEILGQVRRDTTLETAVNIKAYKRTKRQGLREARATXXXXXXXXXXX 434
RALRV+NFQ+QLR E + RRDTTLETA+NIK YKRTKRQGLREARAT
Sbjct: 446 RALRVLNFQRQLRMEFVQCTRRDTTLETALNIKLYKRTKRQGLREARATEKLEKQQKLEA 505
Query: 435 XXXXXXXHQEFLQTVLQHVKDFKEY 509
H EFL VLQH KD +E+
Sbjct: 506 ERKRRQKHLEFLAAVLQHGKDLREF 530
Score = 88.6 bits (210), Expect = 2e-16
Identities = 45/85 (52%), Positives = 56/85 (65%)
Frame = +2
Query: 509 HRNNLAKTARINKSIMNYHANAXXXXXXXXXXXXXXXMRG*WQKTKKVTVN*FDQKKDKR 688
HRNN A+ AR+NK++MN+HANA MR + ++ DQKKDKR
Sbjct: 531 HRNNKAQLARMNKAVMNHHANAEREQKKEQERIEKERMRRLMAEDEEGYRKLIDQKKDKR 590
Query: 689 LAFLLSQTDEYIASLTEMVKQHKQD 763
LAFLLSQTDEYI++LT+MVKQHK D
Sbjct: 591 LAFLLSQTDEYISNLTQMVKQHKDD 615
Score = 57.6 bits (133), Expect = 3e-07
Identities = 36/89 (40%), Positives = 43/89 (48%), Gaps = 7/89 (7%)
Frame = +1
Query: 10 RGPAPLRPSAPGAP---GTPQTQQ----LPGAKQNRVTTMPKPVGIDPVQILXXXXXXXX 168
RG P P P G PQ Q +P K NR+TT+ KPVG+DP+ +L
Sbjct: 357 RGTLPGMPPGSQVPQPGGGPQRQVPPAGMPMPKPNRITTVAKPVGLDPITLLQERENRIA 416
Query: 169 XXXXXXXXXLSNLPANMPDDLRLQAQIEL 255
L LPA M +DLRLQA IEL
Sbjct: 417 ARISLRMQELQRLPATMSEDLRLQAAIEL 445
>UniRef50_A7RK66 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 1552
Score = 97.1 bits (231), Expect = 4e-19
Identities = 46/85 (54%), Positives = 57/85 (67%)
Frame = +3
Query: 255 RALRVINFQKQLRSEILGQVRRDTTLETAVNIKAYKRTKRQGLREARATXXXXXXXXXXX 434
RALR++NFQKQLR E++ R+DTTLETA+N KAYKR+K+Q LREAR T
Sbjct: 326 RALRLLNFQKQLRHEVVACTRKDTTLETALNSKAYKRSKKQSLREARITEKLEKQQKMEQ 385
Query: 435 XXXXXXXHQEFLQTVLQHVKDFKEY 509
HQE+L +LQH +DFKEY
Sbjct: 386 ERKRRQKHQEYLNMILQHARDFKEY 410
Score = 73.3 bits (172), Expect = 6e-12
Identities = 38/89 (42%), Positives = 53/89 (59%)
Frame = +2
Query: 497 FQGIHRNNLAKTARINKSIMNYHANAXXXXXXXXXXXXXXXMRG*WQKTKKVTVN*FDQK 676
F+ HR+ +K ++NK++MNYH+ MR + ++ D K
Sbjct: 407 FKEYHRSVQSKIVKLNKAVMNYHSVTDREKKKEEERIEKERMRRLMAEDEEGYRKLIDHK 466
Query: 677 KDKRLAFLLSQTDEYIASLTEMVKQHKQD 763
KDKRL +LLSQTDEYIASLT+MV+QHK+D
Sbjct: 467 KDKRLHYLLSQTDEYIASLTKMVQQHKRD 495
Score = 46.4 bits (105), Expect = 8e-04
Identities = 25/66 (37%), Positives = 34/66 (51%)
Frame = +1
Query: 58 PQTQQLPGAKQNRVTTMPKPVGIDPVQILXXXXXXXXXXXXXXXXXLSNLPANMPDDLRL 237
PQ+Q K +++ + KP G+DPV IL L LP N+PDDLR+
Sbjct: 261 PQSQGQTPTK-SQLAPVAKPTGLDPVAILKERENRIQARIIQRIKELEGLPGNLPDDLRI 319
Query: 238 QAQIEL 255
+A IEL
Sbjct: 320 KAMIEL 325
>UniRef50_A5D6X0 Cluster: SMARCA4 protein; n=36; Deuterostomia|Rep:
SMARCA4 protein - Homo sapiens (Human)
Length = 584
Score = 97.1 bits (231), Expect = 4e-19
Identities = 46/85 (54%), Positives = 58/85 (68%)
Frame = +3
Query: 255 RALRVINFQKQLRSEILGQVRRDTTLETAVNIKAYKRTKRQGLREARATXXXXXXXXXXX 434
+ALR++NFQ+QLR E++ +RRDT LETA+N KAYKR+KRQ LREAR T
Sbjct: 405 KALRLLNFQRQLRQEVVVCMRRDTALETALNAKAYKRSKRQSLREARITEKLEKQQKIEQ 464
Query: 435 XXXXXXXHQEFLQTVLQHVKDFKEY 509
HQE+L ++LQH KDFKEY
Sbjct: 465 ERKRRQKHQEYLNSILQHAKDFKEY 489
Score = 69.7 bits (163), Expect = 7e-11
Identities = 35/87 (40%), Positives = 49/87 (56%)
Frame = +2
Query: 497 FQGIHRNNLAKTARINKSIMNYHANAXXXXXXXXXXXXXXXMRG*WQKTKKVTVN*FDQK 676
F+ HR+ K ++ K++ YHAN MR + ++ DQK
Sbjct: 486 FKEYHRSVTGKIQKLTKAVATYHANTEREQKKENERIEKERMRRLMAEDEEGYRKLIDQK 545
Query: 677 KDKRLAFLLSQTDEYIASLTEMVKQHK 757
KDKRLA+LL QTDEY+A+LTE+V+QHK
Sbjct: 546 KDKRLAYLLQQTDEYVANLTELVRQHK 572
Score = 52.8 bits (121), Expect = 9e-06
Identities = 28/79 (35%), Positives = 39/79 (49%)
Frame = +1
Query: 22 PLRPSAPGAPGTPQTQQLPGAKQNRVTTMPKPVGIDPVQILXXXXXXXXXXXXXXXXXLS 201
P + +PG P P KQ+R+T + KP G+DPV+IL L
Sbjct: 327 PPQTQSPGQPAQPAPMVPLHQKQSRITPIQKPRGLDPVEILQEREYRLQARIAHRIQELE 386
Query: 202 NLPANMPDDLRLQAQIELE 258
NLP ++ DLR +A IEL+
Sbjct: 387 NLPGSLAGDLRTKATIELK 405
>UniRef50_P51532 Cluster: Probable global transcription activator
SNF2L4; n=132; Euteleostomi|Rep: Probable global
transcription activator SNF2L4 - Homo sapiens (Human)
Length = 1647
Score = 97.1 bits (231), Expect = 4e-19
Identities = 46/85 (54%), Positives = 58/85 (68%)
Frame = +3
Query: 255 RALRVINFQKQLRSEILGQVRRDTTLETAVNIKAYKRTKRQGLREARATXXXXXXXXXXX 434
+ALR++NFQ+QLR E++ +RRDT LETA+N KAYKR+KRQ LREAR T
Sbjct: 405 KALRLLNFQRQLRQEVVVCMRRDTALETALNAKAYKRSKRQSLREARITEKLEKQQKIEQ 464
Query: 435 XXXXXXXHQEFLQTVLQHVKDFKEY 509
HQE+L ++LQH KDFKEY
Sbjct: 465 ERKRRQKHQEYLNSILQHAKDFKEY 489
Score = 69.7 bits (163), Expect = 7e-11
Identities = 35/87 (40%), Positives = 49/87 (56%)
Frame = +2
Query: 497 FQGIHRNNLAKTARINKSIMNYHANAXXXXXXXXXXXXXXXMRG*WQKTKKVTVN*FDQK 676
F+ HR+ K ++ K++ YHAN MR + ++ DQK
Sbjct: 486 FKEYHRSVTGKIQKLTKAVATYHANTEREQKKENERIEKERMRRLMAEDEEGYRKLIDQK 545
Query: 677 KDKRLAFLLSQTDEYIASLTEMVKQHK 757
KDKRLA+LL QTDEY+A+LTE+V+QHK
Sbjct: 546 KDKRLAYLLQQTDEYVANLTELVRQHK 572
Score = 52.8 bits (121), Expect = 9e-06
Identities = 28/79 (35%), Positives = 39/79 (49%)
Frame = +1
Query: 22 PLRPSAPGAPGTPQTQQLPGAKQNRVTTMPKPVGIDPVQILXXXXXXXXXXXXXXXXXLS 201
P + +PG P P KQ+R+T + KP G+DPV+IL L
Sbjct: 327 PPQTQSPGQPAQPAPMVPLHQKQSRITPIQKPRGLDPVEILQEREYRLQARIAHRIQELE 386
Query: 202 NLPANMPDDLRLQAQIELE 258
NLP ++ DLR +A IEL+
Sbjct: 387 NLPGSLAGDLRTKATIELK 405
>UniRef50_Q22944 Cluster: Putative uncharacterized protein; n=1;
Caenorhabditis elegans|Rep: Putative uncharacterized
protein - Caenorhabditis elegans
Length = 1336
Score = 50.0 bits (114), Expect = 6e-05
Identities = 26/90 (28%), Positives = 45/90 (50%)
Frame = +2
Query: 497 FQGIHRNNLAKTARINKSIMNYHANAXXXXXXXXXXXXXXXMRG*WQKTKKVTVN*FDQK 676
F+ H+ N+ ++ KS+ Y N ++ Q+ ++ D+K
Sbjct: 202 FKEFHKRNMLNHTKVRKSMQQYITNENKRIAREEMKNEKNRIQKLIQEDEEGYRAMLDEK 261
Query: 677 KDKRLAFLLSQTDEYIASLTEMVKQHKQDT 766
KD+RL +LL QTD+YI SL +++KQ + T
Sbjct: 262 KDQRLVYLLEQTDDYIKSLCDLLKQQQNAT 291
>UniRef50_Q4PFD0 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 1692
Score = 41.9 bits (94), Expect = 0.017
Identities = 23/81 (28%), Positives = 41/81 (50%)
Frame = +3
Query: 255 RALRVINFQKQLRSEILGQVRRDTTLETAVNIKAYKRTKRQGLREARATXXXXXXXXXXX 434
++L ++ QKQLR +++ + TTL ++ A++R K+Q LR+AR T
Sbjct: 551 KSLHLLEKQKQLREQVVQSLNLATTL--GLDRVAFRRVKKQTLRDARMTEQLERKQRVER 608
Query: 435 XXXXXXXHQEFLQTVLQHVKD 497
H ++L T+ H +D
Sbjct: 609 EKRARQKHIDYLSTICNHGRD 629
>UniRef50_A2FSS0 Cluster: SNF2 family N-terminal domain containing
protein; n=2; Trichomonas vaginalis G3|Rep: SNF2 family
N-terminal domain containing protein - Trichomonas
vaginalis G3
Length = 1107
Score = 34.3 bits (75), Expect = 3.4
Identities = 14/27 (51%), Positives = 19/27 (70%)
Frame = +2
Query: 668 DQKKDKRLAFLLSQTDEYIASLTEMVK 748
DQ KD R+ LL +TD+Y+ LTE +K
Sbjct: 329 DQMKDDRIKMLLEKTDKYMKDLTEKIK 355
>UniRef50_A6NLJ0 Cluster: Uncharacterized protein ENSP00000369755;
n=10; Eutheria|Rep: Uncharacterized protein
ENSP00000369755 - Homo sapiens (Human)
Length = 364
Score = 34.3 bits (75), Expect = 3.4
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +1
Query: 10 RGPAPLRPSAPGAPGTPQTQQLPGAKQNRVTTMP 111
RGP P P+APG P PQ G ++ R+ +P
Sbjct: 147 RGPGPATPAAPGGPRLPQDALAAGPRRCRLLRVP 180
>UniRef50_A3RVT8 Cluster: VgrG protein; n=2; Ralstonia
solanacearum|Rep: VgrG protein - Ralstonia solanacearum
UW551
Length = 998
Score = 33.9 bits (74), Expect = 4.5
Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Frame = -2
Query: 283 FWKLITRSALARFELVTEGRQAYWRVGLIIFLYDELFVLQSC-FLFRSISARGRFRQVWA 107
F +L L R+ LV E A+ R FL+ ++ V++ LF + +GR W
Sbjct: 170 FEQLGANGGLVRYRLVIEPWLAFLRHRRDSFLFQDMSVIEVIDSLFGDYNGQGRLTPAWR 229
Query: 106 WWSHD 92
W HD
Sbjct: 230 WSLHD 234
>UniRef50_UPI0000EBCB5D Cluster: PREDICTED: similar to SMARCA4
isoform 2; n=1; Bos taurus|Rep: PREDICTED: similar to
SMARCA4 isoform 2 - Bos taurus
Length = 1613
Score = 33.5 bits (73), Expect = 6.0
Identities = 25/70 (35%), Positives = 29/70 (41%), Gaps = 4/70 (5%)
Frame = +2
Query: 323 YNPRDRCKHKGL*AH*TTRFARGPSHXXXXXXXXXXXXXXXXXXAPRIPTNSSSAR*GFQ 502
++P D + +GL A ARGP H AP IP SSA GFQ
Sbjct: 394 HSPGDGPQRQGLXAQQAAVPARGPHHREAGEAAEDRAGAQAPAEAPGIPQQHSSACQGFQ 453
Query: 503 GI----HRNN 520
GI HR N
Sbjct: 454 GISQVGHRQN 463
>UniRef50_UPI0000DD836D Cluster: PREDICTED: hypothetical protein;
n=1; Homo sapiens|Rep: PREDICTED: hypothetical protein -
Homo sapiens
Length = 246
Score = 33.5 bits (73), Expect = 6.0
Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = +3
Query: 3 ARAWPRAIASLGSWSSRDSTNAAA--TWSQTKSCDHHAQTCRNR 128
AR WP + G W S D +NAAA T S+ +S D + RN+
Sbjct: 201 ARVWPTVTVTPGEWGSSDPSNAAALETGSEIRSEDLLKEIGRNQ 244
>UniRef50_Q82H40 Cluster: Putative acyl-CoA oxidase; n=1;
Streptomyces avermitilis|Rep: Putative acyl-CoA oxidase
- Streptomyces avermitilis
Length = 673
Score = 33.5 bits (73), Expect = 6.0
Identities = 15/25 (60%), Positives = 15/25 (60%)
Frame = +1
Query: 10 RGPAPLRPSAPGAPGTPQTQQLPGA 84
R AP PSAPGAP TP PGA
Sbjct: 461 RPAAPATPSAPGAPATPGAPGAPGA 485
>UniRef50_Q5CVY6 Cluster: Brahma like protein with a HSA domain,
SNF2 like helicase and a bromo domain; n=2;
Cryptosporidium|Rep: Brahma like protein with a HSA
domain, SNF2 like helicase and a bromo domain -
Cryptosporidium parvum Iowa II
Length = 1673
Score = 33.5 bits (73), Expect = 6.0
Identities = 17/88 (19%), Positives = 38/88 (43%)
Frame = +2
Query: 497 FQGIHRNNLAKTARINKSIMNYHANAXXXXXXXXXXXXXXXMRG*WQKTKKVTVN*FDQK 676
FQ +HR N R+ ++ + N + + ++ + +
Sbjct: 492 FQDVHRENQRSIRRVCSHVLRHSTNKERRDQNLEQQMQRARLNALKAQDEEAYLRLLHEA 551
Query: 677 KDKRLAFLLSQTDEYIASLTEMVKQHKQ 760
K++RL L+ QT++Y+ L +V +H++
Sbjct: 552 KNERLLELVHQTEDYMNKLGALVMEHRK 579
>UniRef50_Q82HF3 Cluster: Putative uncharacterized protein; n=2;
Streptomyces|Rep: Putative uncharacterized protein -
Streptomyces avermitilis
Length = 903
Score = 33.1 bits (72), Expect = 7.9
Identities = 15/28 (53%), Positives = 15/28 (53%)
Frame = +1
Query: 1 RHERGPAPLRPSAPGAPGTPQTQQLPGA 84
R R AP P APG PG P T PGA
Sbjct: 303 RGARAGAPRPPGAPGVPGAPGTPGAPGA 330
>UniRef50_Q59164 Cluster: Sialidase; n=2; Actinomyces viscosus|Rep:
Sialidase - Actinomyces viscosus
Length = 913
Score = 33.1 bits (72), Expect = 7.9
Identities = 19/47 (40%), Positives = 26/47 (55%), Gaps = 3/47 (6%)
Frame = +1
Query: 10 RGPAPLRPSAPGA---PGTPQTQQLPGAKQNRVTTMPKPVGIDPVQI 141
R P+ + P A GA PGTP + P +N T PKP G++P +I
Sbjct: 792 RAPSVVNPKATGAATEPGTPSSSASPAPSRNAAPT-PKP-GMEPDEI 836
>UniRef50_Q19079 Cluster: Dumpy : shorter than wild-type protein 3;
n=2; Caenorhabditis|Rep: Dumpy : shorter than wild-type
protein 3 - Caenorhabditis elegans
Length = 302
Score = 33.1 bits (72), Expect = 7.9
Identities = 14/23 (60%), Positives = 15/23 (65%), Gaps = 2/23 (8%)
Frame = -1
Query: 83 APGSCCVC--GVPGAPGAEGRNG 21
A GSCC C G PG PG GR+G
Sbjct: 101 AAGSCCTCQVGPPGPPGPPGRDG 123
>UniRef50_Q17166 Cluster: Cuticular collagen Bmcol-2; n=1; Brugia
malayi|Rep: Cuticular collagen Bmcol-2 - Brugia malayi
(Filarial nematode worm)
Length = 329
Score = 33.1 bits (72), Expect = 7.9
Identities = 18/44 (40%), Positives = 21/44 (47%), Gaps = 5/44 (11%)
Frame = -1
Query: 134 TGSIPTGLGMVVTRFCLAPGSCCVCGV-----PGAPGAEGRNGA 18
+G I T G V G CC CGV PG PG +G +GA
Sbjct: 112 SGGIMTSFGGVTGAPSAPGGGCCGCGVSPPGPPGEPGPDGSDGA 155
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 673,056,340
Number of Sequences: 1657284
Number of extensions: 12538525
Number of successful extensions: 55967
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 43769
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 54901
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 65027411410
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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