Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20422
         (773 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           23   2.1  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    22   4.7  
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    22   6.3  
EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    21   8.3  

>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = +1

Query: 385 ERPEPLRNLRNNKNWRPRGNDDR 453
           ERP    + R N+  RPR N DR
Sbjct: 316 ERPRATDHQRRNEPKRPRPNIDR 338



 Score = 22.6 bits (46), Expect = 3.6
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +1

Query: 412 RNNKNWRPRGNDDRSTKNS 468
           RNN + R +G   R++KNS
Sbjct: 397 RNNTSSRAQGETSRNSKNS 415


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = -3

Query: 723 IYSSVCDNKNANLLSFF*SNQFTVTF 646
           +YSS C+N +  +  FF   QF   F
Sbjct: 167 VYSSKCENNSTGVEHFF-KKQFHYIF 191


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 13/41 (31%), Positives = 16/41 (39%)
 Frame = -1

Query: 131 GSIPTGLGMVVTRFCLAPGSCCVCGVPGAPGAEGRNGAGPR 9
           G +  GLG+    F LA  S    G P   G +     G R
Sbjct: 258 GKLVLGLGVYGRSFTLASASNNKLGAPIVAGGDAGRYTGER 298


>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 7/28 (25%), Positives = 16/28 (57%)
 Frame = +2

Query: 680 DKRLAFLLSQTDEYIASLTEMVKQHKQD 763
           D+R++F+     E ++ L+     H++D
Sbjct: 266 DQRISFIAGYMTEEVSGLSAFKFMHRED 293


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 157,215
Number of Sequences: 336
Number of extensions: 3239
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20857569
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)