Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20422
(773 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X72889-1|CAA51407.1| 1586|Homo sapiens HBRM protein. 99 2e-20
D26155-1|BAA05142.1| 1572|Homo sapiens transcriptional activator... 99 2e-20
AL359076-5|CAI12969.1| 559|Homo sapiens SWI/SNF related, matrix... 99 2e-20
AL359076-4|CAI12968.1| 1572|Homo sapiens SWI/SNF related, matrix... 99 2e-20
AL359076-3|CAI12967.1| 1590|Homo sapiens SWI/SNF related, matrix... 99 2e-20
AL138755-9|CAI14600.1| 1572|Homo sapiens SWI/SNF related, matrix... 99 2e-20
AL138755-8|CAI14599.1| 1590|Homo sapiens SWI/SNF related, matrix... 99 2e-20
U29175-1|AAB40977.1| 1647|Homo sapiens transcriptional activator... 97 6e-20
D26156-1|BAA05143.1| 1647|Homo sapiens transcriptional activator... 97 6e-20
BC150298-1|AAI50299.1| 1647|Homo sapiens SWI/SNF related, matrix... 97 6e-20
BC139924-1|AAI39925.1| 584|Homo sapiens SMARCA4 protein protein. 97 6e-20
BC139917-1|AAI39918.1| 584|Homo sapiens SMARCA4 protein protein. 97 6e-20
AF254822-2|AAG24789.1| 1647|Homo sapiens SMARCA4 isoform 1 protein. 97 6e-20
AF254822-1|AAG24790.1| 1679|Homo sapiens SMARCA4 isoform 2 protein. 97 6e-20
AB209313-1|BAD92550.1| 1164|Homo sapiens SWI/SNF-related matrix-... 97 6e-20
U01877-1|AAA18639.1| 2414|Homo sapiens p300 protein protein. 33 0.86
BC053889-1|AAH53889.1| 1553|Homo sapiens EP300 protein protein. 33 0.86
AL096765-1|CAH73688.1| 2414|Homo sapiens E1A binding protein p30... 33 0.86
AL080243-3|CAH70384.1| 2414|Homo sapiens E1A binding protein p30... 33 0.86
AL035658-3|CAI23037.1| 2414|Homo sapiens E1A binding protein p30... 33 0.86
BC132777-1|AAI32778.1| 496|Homo sapiens FLT3-interacting zinc f... 33 1.5
AK160385-1|BAD18728.1| 222|Homo sapiens FLJ00416 protein protein. 33 1.5
AK027674-1|BAB55286.1| 496|Homo sapiens protein ( Homo sapiens ... 33 1.5
Z83844-3|CAI20370.2| 701|Homo sapiens SH3-domain binding protei... 31 3.5
CR456576-1|CAG30462.1| 701|Homo sapiens SH3BP1 protein. 31 3.5
BC008282-1|AAH08282.1| 621|Homo sapiens SH3BP1 protein protein. 31 3.5
AY364241-1|AAQ76800.1| 632|Homo sapiens SH3 domain binding prot... 31 3.5
AK092754-1|BAC03965.1| 615|Homo sapiens protein ( Homo sapiens ... 31 3.5
BC132895-1|AAI32896.1| 414|Homo sapiens V-set and immunoglobuli... 31 6.1
BC132893-1|AAI32894.1| 414|Homo sapiens V-set and immunoglobuli... 31 6.1
BC024015-1|AAH24015.1| 289|Homo sapiens C1q and tumor necrosis ... 31 6.1
BC022187-1|AAH22187.1| 289|Homo sapiens C1q and tumor necrosis ... 31 6.1
AL590560-9|CAH71106.1| 414|Homo sapiens novel protein protein. 31 6.1
AF329839-1|AAK17963.1| 289|Homo sapiens complement-c1q tumor ne... 31 6.1
>X72889-1|CAA51407.1| 1586|Homo sapiens HBRM protein.
Length = 1586
Score = 99.1 bits (236), Expect = 2e-20
Identities = 47/85 (55%), Positives = 59/85 (69%)
Frame = +3
Query: 255 RALRVINFQKQLRSEILGQVRRDTTLETAVNIKAYKRTKRQGLREARATXXXXXXXXXXX 434
+ALR++NFQ+QLR E++ +RRDTTLETA+N KAYKR+KRQ LREAR T
Sbjct: 377 KALRLLNFQRQLRQEVVACMRRDTTLETALNSKAYKRSKRQTLREARMTEKLEKQQKIEQ 436
Query: 435 XXXXXXXHQEFLQTVLQHVKDFKEY 509
HQE+L ++LQH KDFKEY
Sbjct: 437 ERKRRQKHQEYLNSILQHAKDFKEY 461
Score = 63.7 bits (148), Expect = 7e-10
Identities = 32/88 (36%), Positives = 49/88 (55%)
Frame = +2
Query: 497 FQGIHRNNLAKTARINKSIMNYHANAXXXXXXXXXXXXXXXMRG*WQKTKKVTVN*FDQK 676
F+ HR+ K +++K++ +HAN MR + ++ DQK
Sbjct: 458 FKEYHRSVAGKIQKLSKAVATWHANTEREQKKETERIEKERMRRLMAEDEEGYRKLIDQK 517
Query: 677 KDKRLAFLLSQTDEYIASLTEMVKQHKQ 760
KD+RLA+LL QTDEY+A+LT +V +HKQ
Sbjct: 518 KDRRLAYLLQQTDEYVANLTNLVWEHKQ 545
Score = 53.6 bits (123), Expect = 8e-07
Identities = 29/77 (37%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Frame = +1
Query: 31 PSAPG-APGTPQTQQLPGAKQNRVTTMPKPVGIDPVQILXXXXXXXXXXXXXXXXXLSNL 207
PS P APG P KQ+R++ + KP G+DPV+IL L NL
Sbjct: 301 PSVPQPAPGQPSPVLQLQQKQSRISPIQKPQGLDPVEILQEREYRLQARIAHRIQELENL 360
Query: 208 PANMPDDLRLQAQIELE 258
P ++P DLR +A +EL+
Sbjct: 361 PGSLPPDLRTKATVELK 377
>D26155-1|BAA05142.1| 1572|Homo sapiens transcriptional activator
hSNF2a protein.
Length = 1572
Score = 99.1 bits (236), Expect = 2e-20
Identities = 47/85 (55%), Positives = 59/85 (69%)
Frame = +3
Query: 255 RALRVINFQKQLRSEILGQVRRDTTLETAVNIKAYKRTKRQGLREARATXXXXXXXXXXX 434
+ALR++NFQ+QLR E++ +RRDTTLETA+N KAYKR+KRQ LREAR T
Sbjct: 381 KALRLLNFQRQLREEVVACMRRDTTLETALNSKAYKRSKRQTLREARMTEKLEKQQKIEQ 440
Query: 435 XXXXXXXHQEFLQTVLQHVKDFKEY 509
HQE+L ++LQH KDFKEY
Sbjct: 441 ERKRRQKHQEYLNSILQHAKDFKEY 465
Score = 64.1 bits (149), Expect = 5e-10
Identities = 32/88 (36%), Positives = 49/88 (55%)
Frame = +2
Query: 497 FQGIHRNNLAKTARINKSIMNYHANAXXXXXXXXXXXXXXXMRG*WQKTKKVTVN*FDQK 676
F+ HR+ K +++K++ +HAN MR + ++ DQK
Sbjct: 462 FKEYHRSVAGKIQKLSKAVATWHANTEREQKKETERIEKERMRRLMAEDEESYRKLIDQK 521
Query: 677 KDKRLAFLLSQTDEYIASLTEMVKQHKQ 760
KD+RLA+LL QTDEY+A+LT +V +HKQ
Sbjct: 522 KDRRLAYLLQQTDEYVANLTNLVWEHKQ 549
Score = 53.6 bits (123), Expect = 8e-07
Identities = 29/77 (37%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Frame = +1
Query: 31 PSAPG-APGTPQTQQLPGAKQNRVTTMPKPVGIDPVQILXXXXXXXXXXXXXXXXXLSNL 207
PS P APG P KQ+R++ + KP G+DPV+IL L NL
Sbjct: 305 PSVPQPAPGQPSPVLQLQQKQSRISPIQKPQGLDPVEILQEREYRLQARIAHRIQELENL 364
Query: 208 PANMPDDLRLQAQIELE 258
P ++P DLR +A +EL+
Sbjct: 365 PGSLPPDLRTKATVELK 381
>AL359076-5|CAI12969.1| 559|Homo sapiens SWI/SNF related, matrix
associated, actin dependent regulator of chromatin, sub
protein.
Length = 559
Score = 99.1 bits (236), Expect = 2e-20
Identities = 47/85 (55%), Positives = 59/85 (69%)
Frame = +3
Query: 255 RALRVINFQKQLRSEILGQVRRDTTLETAVNIKAYKRTKRQGLREARATXXXXXXXXXXX 434
+ALR++NFQ+QLR E++ +RRDTTLETA+N KAYKR+KRQ LREAR T
Sbjct: 381 KALRLLNFQRQLRQEVVACMRRDTTLETALNSKAYKRSKRQTLREARMTEKLEKQQKIEQ 440
Query: 435 XXXXXXXHQEFLQTVLQHVKDFKEY 509
HQE+L ++LQH KDFKEY
Sbjct: 441 ERKRRQKHQEYLNSILQHAKDFKEY 465
Score = 63.7 bits (148), Expect = 7e-10
Identities = 32/88 (36%), Positives = 49/88 (55%)
Frame = +2
Query: 497 FQGIHRNNLAKTARINKSIMNYHANAXXXXXXXXXXXXXXXMRG*WQKTKKVTVN*FDQK 676
F+ HR+ K +++K++ +HAN MR + ++ DQK
Sbjct: 462 FKEYHRSVAGKIQKLSKAVATWHANTEREQKKETERIEKERMRRLMAEDEEGYRKLIDQK 521
Query: 677 KDKRLAFLLSQTDEYIASLTEMVKQHKQ 760
KD+RLA+LL QTDEY+A+LT +V +HKQ
Sbjct: 522 KDRRLAYLLQQTDEYVANLTNLVWEHKQ 549
Score = 53.6 bits (123), Expect = 8e-07
Identities = 29/77 (37%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Frame = +1
Query: 31 PSAPG-APGTPQTQQLPGAKQNRVTTMPKPVGIDPVQILXXXXXXXXXXXXXXXXXLSNL 207
PS P APG P KQ+R++ + KP G+DPV+IL L NL
Sbjct: 305 PSVPQPAPGQPSPVLQLQQKQSRISPIQKPQGLDPVEILQEREYRLQARIAHRIQELENL 364
Query: 208 PANMPDDLRLQAQIELE 258
P ++P DLR +A +EL+
Sbjct: 365 PGSLPPDLRTKATVELK 381
>AL359076-4|CAI12968.1| 1572|Homo sapiens SWI/SNF related, matrix
associated, actin dependent regulator of chromatin, sub
protein.
Length = 1572
Score = 99.1 bits (236), Expect = 2e-20
Identities = 47/85 (55%), Positives = 59/85 (69%)
Frame = +3
Query: 255 RALRVINFQKQLRSEILGQVRRDTTLETAVNIKAYKRTKRQGLREARATXXXXXXXXXXX 434
+ALR++NFQ+QLR E++ +RRDTTLETA+N KAYKR+KRQ LREAR T
Sbjct: 381 KALRLLNFQRQLRQEVVACMRRDTTLETALNSKAYKRSKRQTLREARMTEKLEKQQKIEQ 440
Query: 435 XXXXXXXHQEFLQTVLQHVKDFKEY 509
HQE+L ++LQH KDFKEY
Sbjct: 441 ERKRRQKHQEYLNSILQHAKDFKEY 465
Score = 63.7 bits (148), Expect = 7e-10
Identities = 32/88 (36%), Positives = 49/88 (55%)
Frame = +2
Query: 497 FQGIHRNNLAKTARINKSIMNYHANAXXXXXXXXXXXXXXXMRG*WQKTKKVTVN*FDQK 676
F+ HR+ K +++K++ +HAN MR + ++ DQK
Sbjct: 462 FKEYHRSVAGKIQKLSKAVATWHANTEREQKKETERIEKERMRRLMAEDEEGYRKLIDQK 521
Query: 677 KDKRLAFLLSQTDEYIASLTEMVKQHKQ 760
KD+RLA+LL QTDEY+A+LT +V +HKQ
Sbjct: 522 KDRRLAYLLQQTDEYVANLTNLVWEHKQ 549
Score = 53.6 bits (123), Expect = 8e-07
Identities = 29/77 (37%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Frame = +1
Query: 31 PSAPG-APGTPQTQQLPGAKQNRVTTMPKPVGIDPVQILXXXXXXXXXXXXXXXXXLSNL 207
PS P APG P KQ+R++ + KP G+DPV+IL L NL
Sbjct: 305 PSVPQPAPGQPSPVLQLQQKQSRISPIQKPQGLDPVEILQEREYRLQARIAHRIQELENL 364
Query: 208 PANMPDDLRLQAQIELE 258
P ++P DLR +A +EL+
Sbjct: 365 PGSLPPDLRTKATVELK 381
>AL359076-3|CAI12967.1| 1590|Homo sapiens SWI/SNF related, matrix
associated, actin dependent regulator of chromatin, sub
protein.
Length = 1590
Score = 99.1 bits (236), Expect = 2e-20
Identities = 47/85 (55%), Positives = 59/85 (69%)
Frame = +3
Query: 255 RALRVINFQKQLRSEILGQVRRDTTLETAVNIKAYKRTKRQGLREARATXXXXXXXXXXX 434
+ALR++NFQ+QLR E++ +RRDTTLETA+N KAYKR+KRQ LREAR T
Sbjct: 381 KALRLLNFQRQLRQEVVACMRRDTTLETALNSKAYKRSKRQTLREARMTEKLEKQQKIEQ 440
Query: 435 XXXXXXXHQEFLQTVLQHVKDFKEY 509
HQE+L ++LQH KDFKEY
Sbjct: 441 ERKRRQKHQEYLNSILQHAKDFKEY 465
Score = 63.7 bits (148), Expect = 7e-10
Identities = 32/88 (36%), Positives = 49/88 (55%)
Frame = +2
Query: 497 FQGIHRNNLAKTARINKSIMNYHANAXXXXXXXXXXXXXXXMRG*WQKTKKVTVN*FDQK 676
F+ HR+ K +++K++ +HAN MR + ++ DQK
Sbjct: 462 FKEYHRSVAGKIQKLSKAVATWHANTEREQKKETERIEKERMRRLMAEDEEGYRKLIDQK 521
Query: 677 KDKRLAFLLSQTDEYIASLTEMVKQHKQ 760
KD+RLA+LL QTDEY+A+LT +V +HKQ
Sbjct: 522 KDRRLAYLLQQTDEYVANLTNLVWEHKQ 549
Score = 53.6 bits (123), Expect = 8e-07
Identities = 29/77 (37%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Frame = +1
Query: 31 PSAPG-APGTPQTQQLPGAKQNRVTTMPKPVGIDPVQILXXXXXXXXXXXXXXXXXLSNL 207
PS P APG P KQ+R++ + KP G+DPV+IL L NL
Sbjct: 305 PSVPQPAPGQPSPVLQLQQKQSRISPIQKPQGLDPVEILQEREYRLQARIAHRIQELENL 364
Query: 208 PANMPDDLRLQAQIELE 258
P ++P DLR +A +EL+
Sbjct: 365 PGSLPPDLRTKATVELK 381
>AL138755-9|CAI14600.1| 1572|Homo sapiens SWI/SNF related, matrix
associated, actin dependent regulator of chromatin, sub
protein.
Length = 1572
Score = 99.1 bits (236), Expect = 2e-20
Identities = 47/85 (55%), Positives = 59/85 (69%)
Frame = +3
Query: 255 RALRVINFQKQLRSEILGQVRRDTTLETAVNIKAYKRTKRQGLREARATXXXXXXXXXXX 434
+ALR++NFQ+QLR E++ +RRDTTLETA+N KAYKR+KRQ LREAR T
Sbjct: 381 KALRLLNFQRQLRQEVVACMRRDTTLETALNSKAYKRSKRQTLREARMTEKLEKQQKIEQ 440
Query: 435 XXXXXXXHQEFLQTVLQHVKDFKEY 509
HQE+L ++LQH KDFKEY
Sbjct: 441 ERKRRQKHQEYLNSILQHAKDFKEY 465
Score = 63.7 bits (148), Expect = 7e-10
Identities = 32/88 (36%), Positives = 49/88 (55%)
Frame = +2
Query: 497 FQGIHRNNLAKTARINKSIMNYHANAXXXXXXXXXXXXXXXMRG*WQKTKKVTVN*FDQK 676
F+ HR+ K +++K++ +HAN MR + ++ DQK
Sbjct: 462 FKEYHRSVAGKIQKLSKAVATWHANTEREQKKETERIEKERMRRLMAEDEEGYRKLIDQK 521
Query: 677 KDKRLAFLLSQTDEYIASLTEMVKQHKQ 760
KD+RLA+LL QTDEY+A+LT +V +HKQ
Sbjct: 522 KDRRLAYLLQQTDEYVANLTNLVWEHKQ 549
Score = 53.6 bits (123), Expect = 8e-07
Identities = 29/77 (37%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Frame = +1
Query: 31 PSAPG-APGTPQTQQLPGAKQNRVTTMPKPVGIDPVQILXXXXXXXXXXXXXXXXXLSNL 207
PS P APG P KQ+R++ + KP G+DPV+IL L NL
Sbjct: 305 PSVPQPAPGQPSPVLQLQQKQSRISPIQKPQGLDPVEILQEREYRLQARIAHRIQELENL 364
Query: 208 PANMPDDLRLQAQIELE 258
P ++P DLR +A +EL+
Sbjct: 365 PGSLPPDLRTKATVELK 381
>AL138755-8|CAI14599.1| 1590|Homo sapiens SWI/SNF related, matrix
associated, actin dependent regulator of chromatin, sub
protein.
Length = 1590
Score = 99.1 bits (236), Expect = 2e-20
Identities = 47/85 (55%), Positives = 59/85 (69%)
Frame = +3
Query: 255 RALRVINFQKQLRSEILGQVRRDTTLETAVNIKAYKRTKRQGLREARATXXXXXXXXXXX 434
+ALR++NFQ+QLR E++ +RRDTTLETA+N KAYKR+KRQ LREAR T
Sbjct: 381 KALRLLNFQRQLRQEVVACMRRDTTLETALNSKAYKRSKRQTLREARMTEKLEKQQKIEQ 440
Query: 435 XXXXXXXHQEFLQTVLQHVKDFKEY 509
HQE+L ++LQH KDFKEY
Sbjct: 441 ERKRRQKHQEYLNSILQHAKDFKEY 465
Score = 63.7 bits (148), Expect = 7e-10
Identities = 32/88 (36%), Positives = 49/88 (55%)
Frame = +2
Query: 497 FQGIHRNNLAKTARINKSIMNYHANAXXXXXXXXXXXXXXXMRG*WQKTKKVTVN*FDQK 676
F+ HR+ K +++K++ +HAN MR + ++ DQK
Sbjct: 462 FKEYHRSVAGKIQKLSKAVATWHANTEREQKKETERIEKERMRRLMAEDEEGYRKLIDQK 521
Query: 677 KDKRLAFLLSQTDEYIASLTEMVKQHKQ 760
KD+RLA+LL QTDEY+A+LT +V +HKQ
Sbjct: 522 KDRRLAYLLQQTDEYVANLTNLVWEHKQ 549
Score = 53.6 bits (123), Expect = 8e-07
Identities = 29/77 (37%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Frame = +1
Query: 31 PSAPG-APGTPQTQQLPGAKQNRVTTMPKPVGIDPVQILXXXXXXXXXXXXXXXXXLSNL 207
PS P APG P KQ+R++ + KP G+DPV+IL L NL
Sbjct: 305 PSVPQPAPGQPSPVLQLQQKQSRISPIQKPQGLDPVEILQEREYRLQARIAHRIQELENL 364
Query: 208 PANMPDDLRLQAQIELE 258
P ++P DLR +A +EL+
Sbjct: 365 PGSLPPDLRTKATVELK 381
>U29175-1|AAB40977.1| 1647|Homo sapiens transcriptional activator
protein.
Length = 1647
Score = 97.1 bits (231), Expect = 6e-20
Identities = 46/85 (54%), Positives = 58/85 (68%)
Frame = +3
Query: 255 RALRVINFQKQLRSEILGQVRRDTTLETAVNIKAYKRTKRQGLREARATXXXXXXXXXXX 434
+ALR++NFQ+QLR E++ +RRDT LETA+N KAYKR+KRQ LREAR T
Sbjct: 405 KALRLLNFQRQLRQEVVVCMRRDTALETALNAKAYKRSKRQSLREARITEKLEKQQKIEQ 464
Query: 435 XXXXXXXHQEFLQTVLQHVKDFKEY 509
HQE+L ++LQH KDFKEY
Sbjct: 465 ERKRRQKHQEYLNSILQHAKDFKEY 489
Score = 68.5 bits (160), Expect = 2e-11
Identities = 35/87 (40%), Positives = 48/87 (55%)
Frame = +2
Query: 497 FQGIHRNNLAKTARINKSIMNYHANAXXXXXXXXXXXXXXXMRG*WQKTKKVTVN*FDQK 676
F+ HR+ K ++ K++ YHAN MR + ++ DQK
Sbjct: 486 FKEYHRSVTGKIQKLTKAVATYHANTEREQKKENERIEKERMRRLMAEDEEGYRKLIDQK 545
Query: 677 KDKRLAFLLSQTDEYIASLTEMVKQHK 757
KDKRLA+LL QTDEY+A+LTE+V QHK
Sbjct: 546 KDKRLAYLLQQTDEYVANLTELVPQHK 572
Score = 52.8 bits (121), Expect = 1e-06
Identities = 28/79 (35%), Positives = 39/79 (49%)
Frame = +1
Query: 22 PLRPSAPGAPGTPQTQQLPGAKQNRVTTMPKPVGIDPVQILXXXXXXXXXXXXXXXXXLS 201
P + +PG P P KQ+R+T + KP G+DPV+IL L
Sbjct: 327 PPQTQSPGQPAQPAPMVPLHQKQSRITPIQKPRGLDPVEILQEREYRLQARIAHRIQELE 386
Query: 202 NLPANMPDDLRLQAQIELE 258
NLP ++ DLR +A IEL+
Sbjct: 387 NLPGSLAGDLRTKATIELK 405
>D26156-1|BAA05143.1| 1647|Homo sapiens transcriptional activator
hSNF2b protein.
Length = 1647
Score = 97.1 bits (231), Expect = 6e-20
Identities = 46/85 (54%), Positives = 58/85 (68%)
Frame = +3
Query: 255 RALRVINFQKQLRSEILGQVRRDTTLETAVNIKAYKRTKRQGLREARATXXXXXXXXXXX 434
+ALR++NFQ+QLR E++ +RRDT LETA+N KAYKR+KRQ LREAR T
Sbjct: 405 KALRLLNFQRQLRQEVVVCMRRDTALETALNAKAYKRSKRQSLREARITEKLEKQQKIEQ 464
Query: 435 XXXXXXXHQEFLQTVLQHVKDFKEY 509
HQE+L ++LQH KDFKEY
Sbjct: 465 ERKRRQKHQEYLNSILQHAKDFKEY 489
Score = 68.5 bits (160), Expect = 2e-11
Identities = 35/87 (40%), Positives = 48/87 (55%)
Frame = +2
Query: 497 FQGIHRNNLAKTARINKSIMNYHANAXXXXXXXXXXXXXXXMRG*WQKTKKVTVN*FDQK 676
F+ HR+ K ++ K++ YHAN MR + ++ DQK
Sbjct: 486 FKEYHRSVTGKIQKLTKAVATYHANTEREQKKENERIEKERMRRLMAEDEEGYRKLIDQK 545
Query: 677 KDKRLAFLLSQTDEYIASLTEMVKQHK 757
KDKRLA+LL QTDEY+A+LTE+V QHK
Sbjct: 546 KDKRLAYLLQQTDEYVANLTELVPQHK 572
Score = 52.8 bits (121), Expect = 1e-06
Identities = 28/79 (35%), Positives = 39/79 (49%)
Frame = +1
Query: 22 PLRPSAPGAPGTPQTQQLPGAKQNRVTTMPKPVGIDPVQILXXXXXXXXXXXXXXXXXLS 201
P + +PG P P KQ+R+T + KP G+DPV+IL L
Sbjct: 327 PPQTQSPGQPAQPAPMVPLHQKQSRITPIQKPRGLDPVEILQEREYRLQARIAHRIQELE 386
Query: 202 NLPANMPDDLRLQAQIELE 258
NLP ++ DLR +A IEL+
Sbjct: 387 NLPGSLAGDLRTKATIELK 405
>BC150298-1|AAI50299.1| 1647|Homo sapiens SWI/SNF related, matrix
associated, actin dependent regulator of chromatin, sub
protein.
Length = 1647
Score = 97.1 bits (231), Expect = 6e-20
Identities = 46/85 (54%), Positives = 58/85 (68%)
Frame = +3
Query: 255 RALRVINFQKQLRSEILGQVRRDTTLETAVNIKAYKRTKRQGLREARATXXXXXXXXXXX 434
+ALR++NFQ+QLR E++ +RRDT LETA+N KAYKR+KRQ LREAR T
Sbjct: 405 KALRLLNFQRQLRQEVVVCMRRDTALETALNAKAYKRSKRQSLREARITEKLEKQQKIEQ 464
Query: 435 XXXXXXXHQEFLQTVLQHVKDFKEY 509
HQE+L ++LQH KDFKEY
Sbjct: 465 ERKRRQKHQEYLNSILQHAKDFKEY 489
Score = 69.7 bits (163), Expect = 1e-11
Identities = 35/87 (40%), Positives = 49/87 (56%)
Frame = +2
Query: 497 FQGIHRNNLAKTARINKSIMNYHANAXXXXXXXXXXXXXXXMRG*WQKTKKVTVN*FDQK 676
F+ HR+ K ++ K++ YHAN MR + ++ DQK
Sbjct: 486 FKEYHRSVTGKIQKLTKAVATYHANTEREQKKENERIEKERMRRLMAEDEEGYRKLIDQK 545
Query: 677 KDKRLAFLLSQTDEYIASLTEMVKQHK 757
KDKRLA+LL QTDEY+A+LTE+V+QHK
Sbjct: 546 KDKRLAYLLQQTDEYVANLTELVRQHK 572
Score = 52.8 bits (121), Expect = 1e-06
Identities = 28/79 (35%), Positives = 39/79 (49%)
Frame = +1
Query: 22 PLRPSAPGAPGTPQTQQLPGAKQNRVTTMPKPVGIDPVQILXXXXXXXXXXXXXXXXXLS 201
P + +PG P P KQ+R+T + KP G+DPV+IL L
Sbjct: 327 PPQTQSPGQPAQPAPMVPLHQKQSRITPIQKPRGLDPVEILQEREYRLQARIAHRIQELE 386
Query: 202 NLPANMPDDLRLQAQIELE 258
NLP ++ DLR +A IEL+
Sbjct: 387 NLPGSLAGDLRTKATIELK 405
>BC139924-1|AAI39925.1| 584|Homo sapiens SMARCA4 protein protein.
Length = 584
Score = 97.1 bits (231), Expect = 6e-20
Identities = 46/85 (54%), Positives = 58/85 (68%)
Frame = +3
Query: 255 RALRVINFQKQLRSEILGQVRRDTTLETAVNIKAYKRTKRQGLREARATXXXXXXXXXXX 434
+ALR++NFQ+QLR E++ +RRDT LETA+N KAYKR+KRQ LREAR T
Sbjct: 405 KALRLLNFQRQLRQEVVVCMRRDTALETALNAKAYKRSKRQSLREARITEKLEKQQKIEQ 464
Query: 435 XXXXXXXHQEFLQTVLQHVKDFKEY 509
HQE+L ++LQH KDFKEY
Sbjct: 465 ERKRRQKHQEYLNSILQHAKDFKEY 489
Score = 69.7 bits (163), Expect = 1e-11
Identities = 35/87 (40%), Positives = 49/87 (56%)
Frame = +2
Query: 497 FQGIHRNNLAKTARINKSIMNYHANAXXXXXXXXXXXXXXXMRG*WQKTKKVTVN*FDQK 676
F+ HR+ K ++ K++ YHAN MR + ++ DQK
Sbjct: 486 FKEYHRSVTGKIQKLTKAVATYHANTEREQKKENERIEKERMRRLMAEDEEGYRKLIDQK 545
Query: 677 KDKRLAFLLSQTDEYIASLTEMVKQHK 757
KDKRLA+LL QTDEY+A+LTE+V+QHK
Sbjct: 546 KDKRLAYLLQQTDEYVANLTELVRQHK 572
Score = 52.8 bits (121), Expect = 1e-06
Identities = 28/79 (35%), Positives = 39/79 (49%)
Frame = +1
Query: 22 PLRPSAPGAPGTPQTQQLPGAKQNRVTTMPKPVGIDPVQILXXXXXXXXXXXXXXXXXLS 201
P + +PG P P KQ+R+T + KP G+DPV+IL L
Sbjct: 327 PPQTQSPGQPAQPAPMVPLHQKQSRITPIQKPRGLDPVEILQEREYRLQARIAHRIQELE 386
Query: 202 NLPANMPDDLRLQAQIELE 258
NLP ++ DLR +A IEL+
Sbjct: 387 NLPGSLAGDLRTKATIELK 405
>BC139917-1|AAI39918.1| 584|Homo sapiens SMARCA4 protein protein.
Length = 584
Score = 97.1 bits (231), Expect = 6e-20
Identities = 46/85 (54%), Positives = 58/85 (68%)
Frame = +3
Query: 255 RALRVINFQKQLRSEILGQVRRDTTLETAVNIKAYKRTKRQGLREARATXXXXXXXXXXX 434
+ALR++NFQ+QLR E++ +RRDT LETA+N KAYKR+KRQ LREAR T
Sbjct: 405 KALRLLNFQRQLRQEVVVCMRRDTALETALNAKAYKRSKRQSLREARITEKLEKQQKIEQ 464
Query: 435 XXXXXXXHQEFLQTVLQHVKDFKEY 509
HQE+L ++LQH KDFKEY
Sbjct: 465 ERKRRQKHQEYLNSILQHAKDFKEY 489
Score = 69.7 bits (163), Expect = 1e-11
Identities = 35/87 (40%), Positives = 49/87 (56%)
Frame = +2
Query: 497 FQGIHRNNLAKTARINKSIMNYHANAXXXXXXXXXXXXXXXMRG*WQKTKKVTVN*FDQK 676
F+ HR+ K ++ K++ YHAN MR + ++ DQK
Sbjct: 486 FKEYHRSVTGKIQKLTKAVATYHANTEREQKKENERIEKERMRRLMAEDEEGYRKLIDQK 545
Query: 677 KDKRLAFLLSQTDEYIASLTEMVKQHK 757
KDKRLA+LL QTDEY+A+LTE+V+QHK
Sbjct: 546 KDKRLAYLLQQTDEYVANLTELVRQHK 572
Score = 52.8 bits (121), Expect = 1e-06
Identities = 28/79 (35%), Positives = 39/79 (49%)
Frame = +1
Query: 22 PLRPSAPGAPGTPQTQQLPGAKQNRVTTMPKPVGIDPVQILXXXXXXXXXXXXXXXXXLS 201
P + +PG P P KQ+R+T + KP G+DPV+IL L
Sbjct: 327 PPQTQSPGQPAQPAPMVPLHQKQSRITPIQKPRGLDPVEILQEREYRLQARIAHRIQELE 386
Query: 202 NLPANMPDDLRLQAQIELE 258
NLP ++ DLR +A IEL+
Sbjct: 387 NLPGSLAGDLRTKATIELK 405
>AF254822-2|AAG24789.1| 1647|Homo sapiens SMARCA4 isoform 1 protein.
Length = 1647
Score = 97.1 bits (231), Expect = 6e-20
Identities = 46/85 (54%), Positives = 58/85 (68%)
Frame = +3
Query: 255 RALRVINFQKQLRSEILGQVRRDTTLETAVNIKAYKRTKRQGLREARATXXXXXXXXXXX 434
+ALR++NFQ+QLR E++ +RRDT LETA+N KAYKR+KRQ LREAR T
Sbjct: 405 KALRLLNFQRQLRQEVVVCMRRDTALETALNAKAYKRSKRQSLREARITEKLEKQQKIEQ 464
Query: 435 XXXXXXXHQEFLQTVLQHVKDFKEY 509
HQE+L ++LQH KDFKEY
Sbjct: 465 ERKRRQKHQEYLNSILQHAKDFKEY 489
Score = 69.7 bits (163), Expect = 1e-11
Identities = 35/87 (40%), Positives = 49/87 (56%)
Frame = +2
Query: 497 FQGIHRNNLAKTARINKSIMNYHANAXXXXXXXXXXXXXXXMRG*WQKTKKVTVN*FDQK 676
F+ HR+ K ++ K++ YHAN MR + ++ DQK
Sbjct: 486 FKEYHRSVTGKIQKLTKAVATYHANTEREQKKENERIEKERMRRLMAEDEEGYRKLIDQK 545
Query: 677 KDKRLAFLLSQTDEYIASLTEMVKQHK 757
KDKRLA+LL QTDEY+A+LTE+V+QHK
Sbjct: 546 KDKRLAYLLQQTDEYVANLTELVRQHK 572
Score = 52.8 bits (121), Expect = 1e-06
Identities = 28/79 (35%), Positives = 39/79 (49%)
Frame = +1
Query: 22 PLRPSAPGAPGTPQTQQLPGAKQNRVTTMPKPVGIDPVQILXXXXXXXXXXXXXXXXXLS 201
P + +PG P P KQ+R+T + KP G+DPV+IL L
Sbjct: 327 PPQTQSPGQPAQPAPMVPLHQKQSRITPIQKPRGLDPVEILQEREYRLQARIAHRIQELE 386
Query: 202 NLPANMPDDLRLQAQIELE 258
NLP ++ DLR +A IEL+
Sbjct: 387 NLPGSLAGDLRTKATIELK 405
>AF254822-1|AAG24790.1| 1679|Homo sapiens SMARCA4 isoform 2 protein.
Length = 1679
Score = 97.1 bits (231), Expect = 6e-20
Identities = 46/85 (54%), Positives = 58/85 (68%)
Frame = +3
Query: 255 RALRVINFQKQLRSEILGQVRRDTTLETAVNIKAYKRTKRQGLREARATXXXXXXXXXXX 434
+ALR++NFQ+QLR E++ +RRDT LETA+N KAYKR+KRQ LREAR T
Sbjct: 405 KALRLLNFQRQLRQEVVVCMRRDTALETALNAKAYKRSKRQSLREARITEKLEKQQKIEQ 464
Query: 435 XXXXXXXHQEFLQTVLQHVKDFKEY 509
HQE+L ++LQH KDFKEY
Sbjct: 465 ERKRRQKHQEYLNSILQHAKDFKEY 489
Score = 69.7 bits (163), Expect = 1e-11
Identities = 35/87 (40%), Positives = 49/87 (56%)
Frame = +2
Query: 497 FQGIHRNNLAKTARINKSIMNYHANAXXXXXXXXXXXXXXXMRG*WQKTKKVTVN*FDQK 676
F+ HR+ K ++ K++ YHAN MR + ++ DQK
Sbjct: 486 FKEYHRSVTGKIQKLTKAVATYHANTEREQKKENERIEKERMRRLMAEDEEGYRKLIDQK 545
Query: 677 KDKRLAFLLSQTDEYIASLTEMVKQHK 757
KDKRLA+LL QTDEY+A+LTE+V+QHK
Sbjct: 546 KDKRLAYLLQQTDEYVANLTELVRQHK 572
Score = 52.8 bits (121), Expect = 1e-06
Identities = 28/79 (35%), Positives = 39/79 (49%)
Frame = +1
Query: 22 PLRPSAPGAPGTPQTQQLPGAKQNRVTTMPKPVGIDPVQILXXXXXXXXXXXXXXXXXLS 201
P + +PG P P KQ+R+T + KP G+DPV+IL L
Sbjct: 327 PPQTQSPGQPAQPAPMVPLHQKQSRITPIQKPRGLDPVEILQEREYRLQARIAHRIQELE 386
Query: 202 NLPANMPDDLRLQAQIELE 258
NLP ++ DLR +A IEL+
Sbjct: 387 NLPGSLAGDLRTKATIELK 405
>AB209313-1|BAD92550.1| 1164|Homo sapiens SWI/SNF-related
matrix-associated actin-dependent regulator of chromatin
a4 var protein.
Length = 1164
Score = 97.1 bits (231), Expect = 6e-20
Identities = 46/85 (54%), Positives = 58/85 (68%)
Frame = +3
Query: 255 RALRVINFQKQLRSEILGQVRRDTTLETAVNIKAYKRTKRQGLREARATXXXXXXXXXXX 434
+ALR++NFQ+QLR E++ +RRDT LETA+N KAYKR+KRQ LREAR T
Sbjct: 362 KALRLLNFQRQLRQEVVVCMRRDTALETALNAKAYKRSKRQSLREARITEKLEKQQKIEQ 421
Query: 435 XXXXXXXHQEFLQTVLQHVKDFKEY 509
HQE+L ++LQH KDFKEY
Sbjct: 422 ERKRRQKHQEYLNSILQHAKDFKEY 446
Score = 69.7 bits (163), Expect = 1e-11
Identities = 35/87 (40%), Positives = 49/87 (56%)
Frame = +2
Query: 497 FQGIHRNNLAKTARINKSIMNYHANAXXXXXXXXXXXXXXXMRG*WQKTKKVTVN*FDQK 676
F+ HR+ K ++ K++ YHAN MR + ++ DQK
Sbjct: 443 FKEYHRSVTGKIQKLTKAVATYHANTEREQKKENERIEKERMRRLMAEDEEGYRKLIDQK 502
Query: 677 KDKRLAFLLSQTDEYIASLTEMVKQHK 757
KDKRLA+LL QTDEY+A+LTE+V+QHK
Sbjct: 503 KDKRLAYLLQQTDEYVANLTELVRQHK 529
Score = 52.8 bits (121), Expect = 1e-06
Identities = 28/79 (35%), Positives = 39/79 (49%)
Frame = +1
Query: 22 PLRPSAPGAPGTPQTQQLPGAKQNRVTTMPKPVGIDPVQILXXXXXXXXXXXXXXXXXLS 201
P + +PG P P KQ+R+T + KP G+DPV+IL L
Sbjct: 284 PPQTQSPGQPAQPAPMVPLHQKQSRITPIQKPRGLDPVEILQEREYRLQARIAHRIQELE 343
Query: 202 NLPANMPDDLRLQAQIELE 258
NLP ++ DLR +A IEL+
Sbjct: 344 NLPGSLAGDLRTKATIELK 362
>U01877-1|AAA18639.1| 2414|Homo sapiens p300 protein protein.
Length = 2414
Score = 33.5 bits (73), Expect = 0.86
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +1
Query: 16 PAPLRPSAPGAPGTPQTQQLPGAKQNRVTTMPKP 117
P ++PS P AP Q QQ P ++Q+ ++P P
Sbjct: 894 PQQVQPSLPAAPSADQPQQQPRSQQSTAASVPTP 927
>BC053889-1|AAH53889.1| 1553|Homo sapiens EP300 protein protein.
Length = 1553
Score = 33.5 bits (73), Expect = 0.86
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +1
Query: 16 PAPLRPSAPGAPGTPQTQQLPGAKQNRVTTMPKP 117
P ++PS P AP Q QQ P ++Q+ ++P P
Sbjct: 894 PQQVQPSLPAAPSADQPQQQPRSQQSTAASVPTP 927
>AL096765-1|CAH73688.1| 2414|Homo sapiens E1A binding protein p300
protein.
Length = 2414
Score = 33.5 bits (73), Expect = 0.86
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +1
Query: 16 PAPLRPSAPGAPGTPQTQQLPGAKQNRVTTMPKP 117
P ++PS P AP Q QQ P ++Q+ ++P P
Sbjct: 894 PQQVQPSLPAAPSADQPQQQPRSQQSTAASVPTP 927
>AL080243-3|CAH70384.1| 2414|Homo sapiens E1A binding protein p300
protein.
Length = 2414
Score = 33.5 bits (73), Expect = 0.86
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +1
Query: 16 PAPLRPSAPGAPGTPQTQQLPGAKQNRVTTMPKP 117
P ++PS P AP Q QQ P ++Q+ ++P P
Sbjct: 894 PQQVQPSLPAAPSADQPQQQPRSQQSTAASVPTP 927
>AL035658-3|CAI23037.1| 2414|Homo sapiens E1A binding protein p300
protein.
Length = 2414
Score = 33.5 bits (73), Expect = 0.86
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +1
Query: 16 PAPLRPSAPGAPGTPQTQQLPGAKQNRVTTMPKP 117
P ++PS P AP Q QQ P ++Q+ ++P P
Sbjct: 894 PQQVQPSLPAAPSADQPQQQPRSQQSTAASVPTP 927
>BC132777-1|AAI32778.1| 496|Homo sapiens FLT3-interacting zinc
finger 1 protein.
Length = 496
Score = 32.7 bits (71), Expect = 1.5
Identities = 14/25 (56%), Positives = 14/25 (56%)
Frame = -1
Query: 89 CLAPGSCCVCGVPGAPGAEGRNGAG 15
C G C VCG GA G EG GAG
Sbjct: 154 CCNVGPCSVCGGSGAGGGEGPEGAG 178
>AK160385-1|BAD18728.1| 222|Homo sapiens FLJ00416 protein protein.
Length = 222
Score = 32.7 bits (71), Expect = 1.5
Identities = 14/25 (56%), Positives = 14/25 (56%)
Frame = -1
Query: 89 CLAPGSCCVCGVPGAPGAEGRNGAG 15
C G C VCG GA G EG GAG
Sbjct: 182 CCNVGPCSVCGGSGAGGGEGPEGAG 206
>AK027674-1|BAB55286.1| 496|Homo sapiens protein ( Homo sapiens
cDNA FLJ14768 fis, clone NT2RP3004125, moderately
similar to Mus musculus zinc finger protein splice
variant FIZ1-B ).
Length = 496
Score = 32.7 bits (71), Expect = 1.5
Identities = 14/25 (56%), Positives = 14/25 (56%)
Frame = -1
Query: 89 CLAPGSCCVCGVPGAPGAEGRNGAG 15
C G C VCG GA G EG GAG
Sbjct: 154 CCNVGPCSVCGGSGAGGGEGPEGAG 178
>Z83844-3|CAI20370.2| 701|Homo sapiens SH3-domain binding protein 1
protein.
Length = 701
Score = 31.5 bits (68), Expect = 3.5
Identities = 18/43 (41%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
Frame = +1
Query: 16 PAPLRPSAPGAPGTPQT--QQLPGAKQNRVTTMPKPVGIDPVQ 138
PAP P G+PGTPQ ++L G+ R T+P P+ P Q
Sbjct: 588 PAPPLPPGSGSPGTPQALPRRLVGSSL-RAPTVPPPLPPTPPQ 629
>CR456576-1|CAG30462.1| 701|Homo sapiens SH3BP1 protein.
Length = 701
Score = 31.5 bits (68), Expect = 3.5
Identities = 18/43 (41%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
Frame = +1
Query: 16 PAPLRPSAPGAPGTPQT--QQLPGAKQNRVTTMPKPVGIDPVQ 138
PAP P G+PGTPQ ++L G+ R T+P P+ P Q
Sbjct: 588 PAPPLPPGSGSPGTPQALPRRLVGSSL-RAPTVPPPLPPTPPQ 629
>BC008282-1|AAH08282.1| 621|Homo sapiens SH3BP1 protein protein.
Length = 621
Score = 31.5 bits (68), Expect = 3.5
Identities = 18/43 (41%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
Frame = +1
Query: 16 PAPLRPSAPGAPGTPQT--QQLPGAKQNRVTTMPKPVGIDPVQ 138
PAP P G+PGTPQ ++L G+ R T+P P+ P Q
Sbjct: 508 PAPPLPPGSGSPGTPQALPRRLVGSSL-RAPTVPPPLPPTPPQ 549
>AY364241-1|AAQ76800.1| 632|Homo sapiens SH3 domain binding protein
1 protein.
Length = 632
Score = 31.5 bits (68), Expect = 3.5
Identities = 18/43 (41%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
Frame = +1
Query: 16 PAPLRPSAPGAPGTPQT--QQLPGAKQNRVTTMPKPVGIDPVQ 138
PAP P G+PGTPQ ++L G+ R T+P P+ P Q
Sbjct: 519 PAPPLPPGSGSPGTPQALPRRLVGSSL-RAPTVPPPLPPTPPQ 560
>AK092754-1|BAC03965.1| 615|Homo sapiens protein ( Homo sapiens
cDNA FLJ35435 fis, clone SMINT2002620. ).
Length = 615
Score = 31.5 bits (68), Expect = 3.5
Identities = 14/26 (53%), Positives = 18/26 (69%)
Frame = +1
Query: 7 ERGPAPLRPSAPGAPGTPQTQQLPGA 84
E+ P PLRP+ P P +PQ+ Q PGA
Sbjct: 458 EQPPTPLRPTTP-KPQSPQSPQSPGA 482
>BC132895-1|AAI32896.1| 414|Homo sapiens V-set and immunoglobulin
domain containing 8 protein.
Length = 414
Score = 30.7 bits (66), Expect = 6.1
Identities = 17/37 (45%), Positives = 19/37 (51%), Gaps = 4/37 (10%)
Frame = -1
Query: 113 LGMVVTRFCLAPGS----CCVCGVPGAPGAEGRNGAG 15
LG ++ CLA G CC CG GA GA G G G
Sbjct: 270 LGSLLALGCLAVGIWGLVCCCCGGSGAGGARGAFGYG 306
>BC132893-1|AAI32894.1| 414|Homo sapiens V-set and immunoglobulin
domain containing 8 protein.
Length = 414
Score = 30.7 bits (66), Expect = 6.1
Identities = 17/37 (45%), Positives = 19/37 (51%), Gaps = 4/37 (10%)
Frame = -1
Query: 113 LGMVVTRFCLAPGS----CCVCGVPGAPGAEGRNGAG 15
LG ++ CLA G CC CG GA GA G G G
Sbjct: 270 LGSLLALGCLAVGIWGLVCCCCGGSGAGGARGAFGYG 306
>BC024015-1|AAH24015.1| 289|Homo sapiens C1q and tumor necrosis
factor related protein 7 protein.
Length = 289
Score = 30.7 bits (66), Expect = 6.1
Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Frame = -1
Query: 161 LFSLSFNICTGSIPTGLGMVVTRFCLAPGSCCVCGVPGAPGAEGRNGA-GP 12
L+ SF IC P G + + C + G+PG PG G NG+ GP
Sbjct: 5 LYVTSFAICASGQPRGNQLKGENYS-PRYICSIPGLPGPPGPPGANGSPGP 54
>BC022187-1|AAH22187.1| 289|Homo sapiens C1q and tumor necrosis
factor related protein 7 protein.
Length = 289
Score = 30.7 bits (66), Expect = 6.1
Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Frame = -1
Query: 161 LFSLSFNICTGSIPTGLGMVVTRFCLAPGSCCVCGVPGAPGAEGRNGA-GP 12
L+ SF IC P G + + C + G+PG PG G NG+ GP
Sbjct: 5 LYVTSFAICASGQPRGNQLKGENYS-PRYICSIPGLPGPPGPPGANGSPGP 54
>AL590560-9|CAH71106.1| 414|Homo sapiens novel protein protein.
Length = 414
Score = 30.7 bits (66), Expect = 6.1
Identities = 17/37 (45%), Positives = 19/37 (51%), Gaps = 4/37 (10%)
Frame = -1
Query: 113 LGMVVTRFCLAPGS----CCVCGVPGAPGAEGRNGAG 15
LG ++ CLA G CC CG GA GA G G G
Sbjct: 270 LGSLLALGCLAVGIWGLVCCCCGGSGAGGARGAFGYG 306
>AF329839-1|AAK17963.1| 289|Homo sapiens complement-c1q tumor
necrosis factor-related protein protein.
Length = 289
Score = 30.7 bits (66), Expect = 6.1
Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Frame = -1
Query: 161 LFSLSFNICTGSIPTGLGMVVTRFCLAPGSCCVCGVPGAPGAEGRNGA-GP 12
L+ SF IC P G + + C + G+PG PG G NG+ GP
Sbjct: 5 LYVTSFAICASGQPRGNQLKGENYS-PRYICSIPGLPGPPGPPGANGSPGP 54
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,231,025
Number of Sequences: 237096
Number of extensions: 1994040
Number of successful extensions: 25749
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 15288
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24962
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9367263024
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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