Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20421
         (564 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF487534-1|AAL93295.1|  509|Anopheles gambiae cytochrome P450 CY...    25   2.3  
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            23   6.9  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            23   6.9  

>AF487534-1|AAL93295.1|  509|Anopheles gambiae cytochrome P450
           CYP6P3 protein.
          Length = 509

 Score = 24.6 bits (51), Expect = 2.3
 Identities = 13/37 (35%), Positives = 21/37 (56%)
 Frame = +2

Query: 446 NTYLLILMYIGRSSYRAL*KGLDGKNSYEKLSRHFLD 556
           NT +++  ++  SSY  L + L  K +Y  + R FLD
Sbjct: 217 NTMIMMKTFLA-SSYPTLVRNLHMKITYNDVERFFLD 252


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 23.0 bits (47), Expect = 6.9
 Identities = 9/28 (32%), Positives = 18/28 (64%)
 Frame = +3

Query: 219  SCATTS*LILYIVLDCKNLRRSIFFRLC 302
            +  T S L++ ++   KNL +++F +LC
Sbjct: 2308 NAVTLSSLLVRVITQRKNLAKNMFDQLC 2335


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 23.0 bits (47), Expect = 6.9
 Identities = 9/28 (32%), Positives = 18/28 (64%)
 Frame = +3

Query: 219  SCATTS*LILYIVLDCKNLRRSIFFRLC 302
            +  T S L++ ++   KNL +++F +LC
Sbjct: 2309 NAVTLSSLLVRVITQRKNLAKNMFDQLC 2336


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 498,653
Number of Sequences: 2352
Number of extensions: 8688
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 52983882
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)