Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20420
         (807 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    26   0.31 
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    23   2.9  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    23   3.8  
DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        21   8.7  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 26.2 bits (55), Expect = 0.31
 Identities = 16/50 (32%), Positives = 24/50 (48%)
 Frame = +3

Query: 603 YYLKNLVMVFILELFFYITLIIN*NVKFCYGAVIFCFNIEI*KKVSILSF 752
           YY  +  ++F + L FY  LII   + + Y A I  F + +   V I  F
Sbjct: 213 YYFYSAFIIFTIHLLFYCVLIILLCIYYFYYAFIL-FTVHLLLLVCIYYF 261



 Score = 23.8 bits (49), Expect = 1.6
 Identities = 15/67 (22%), Positives = 28/67 (41%)
 Frame = +3

Query: 570 MFFYIYCCLSEYYLKNLVMVFILELFFYITLIIN*NVKFCYGAVIFCFNIEI*KKVSILS 749
           + F ++  L  YY     ++ +   +FY   II   V   +   I+ F + +   + I  
Sbjct: 90  IIFTVHFLLCTYYFYYAFIILLCVYYFYYAFIIF-TVHLLFLLCIYYFVVPLFFLLCIYY 148

Query: 750 F*CTYFI 770
           F C + I
Sbjct: 149 FYCAFII 155



 Score = 23.4 bits (48), Expect = 2.2
 Identities = 11/50 (22%), Positives = 24/50 (48%), Gaps = 3/50 (6%)
 Frame = +3

Query: 567 HMFFY---IYCCLSEYYLKNLVMVFILELFFYITLIIN*NVKFCYGAVIF 707
           + F+Y   ++CC    +  +L+ +  +  F+   +I+     FC   +IF
Sbjct: 259 YYFYYMHLLFCCAFIIFTMHLLFLLCIYYFYCALIILLCIYYFCRAFIIF 308


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 7/11 (63%), Positives = 7/11 (63%)
 Frame = -1

Query: 240 CVVRARNHCWV 208
           CVV    HCWV
Sbjct: 484 CVVEGNPHCWV 494


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 14/41 (34%), Positives = 18/41 (43%)
 Frame = -1

Query: 663 SMLYRKIILV*IPSLSFLNNIQIDNSKYKKTCALLHLLIYK 541
           S+LY    LV +  L F+  IQI      K C     LI +
Sbjct: 279 SLLYMVTKLVVVTFLKFIKKIQIFGIMITKACMSASNLIQR 319


>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 12/50 (24%), Positives = 20/50 (40%)
 Frame = +3

Query: 261 DMKFHVLNCPSKTSIFPIEKPPKTVASITTPKIILQKEYLPETDPNHEIW 410
           D  F+ +  P+ TS+     P       T+P + L         P+H I+
Sbjct: 304 DDAFNSVATPTPTSVMTELYPSPVPGHSTSPNLPLTHNIAHNPYPSHSIY 353


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 193,515
Number of Sequences: 336
Number of extensions: 4622
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21999028
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)