Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20420
         (807 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC040049-1|AAH40049.1|  148|Homo sapiens family with sequence si...    48   5e-05
AL121886-5|CAI18926.1|  123|Homo sapiens family with sequence si...    48   5e-05
AL121886-4|CAC08393.1|  148|Homo sapiens family with sequence si...    48   5e-05
BC105587-1|AAI05588.1|  167|Homo sapiens family with sequence si...    38   0.043
BC021179-1|AAH21179.1|  167|Homo sapiens family with sequence si...    38   0.043
AK098819-1|BAC05423.1|  167|Homo sapiens protein ( Homo sapiens ...    38   0.043
BC114631-1|AAI14632.1|  339|Homo sapiens chromosome 6 open readi...    33   1.2  
BC114630-1|AAI14631.1|  339|Homo sapiens chromosome 6 open readi...    33   1.2  
AL390026-2|CAI20238.1|  339|Homo sapiens chromosome 6 open readi...    33   1.2  
AL031058-2|CAI21647.2|  339|Homo sapiens chromosome 6 open readi...    33   1.2  
AK056796-1|BAB71287.1|  144|Homo sapiens protein ( Homo sapiens ...    33   1.2  
CR457084-1|CAG33365.1|  260|Homo sapiens UPK1B protein.                32   2.8  

>BC040049-1|AAH40049.1|  148|Homo sapiens family with sequence
           similarity 112, member A protein.
          Length = 148

 Score = 47.6 bits (108), Expect = 5e-05
 Identities = 21/46 (45%), Positives = 25/46 (54%), Gaps = 4/46 (8%)
 Frame = +1

Query: 121 DPFVSCPYNPIHRVPRSRLQRHIVKCEWINP----TMIACPYNATH 246
           + F  CPY+P HR+P SR Q H+  C   NP     M  C YNA H
Sbjct: 4   EAFEICPYDPHHRIPLSRFQYHLASCRRKNPKKAKKMATCKYNACH 49


>AL121886-5|CAI18926.1|  123|Homo sapiens family with sequence
           similarity 112, member A protein.
          Length = 123

 Score = 47.6 bits (108), Expect = 5e-05
 Identities = 21/46 (45%), Positives = 25/46 (54%), Gaps = 4/46 (8%)
 Frame = +1

Query: 121 DPFVSCPYNPIHRVPRSRLQRHIVKCEWINP----TMIACPYNATH 246
           + F  CPY+P HR+P SR Q H+  C   NP     M  C YNA H
Sbjct: 4   EAFEICPYDPHHRIPLSRFQYHLASCRRKNPKKAKKMATCKYNACH 49


>AL121886-4|CAC08393.1|  148|Homo sapiens family with sequence
           similarity 112, member A protein.
          Length = 148

 Score = 47.6 bits (108), Expect = 5e-05
 Identities = 21/46 (45%), Positives = 25/46 (54%), Gaps = 4/46 (8%)
 Frame = +1

Query: 121 DPFVSCPYNPIHRVPRSRLQRHIVKCEWINP----TMIACPYNATH 246
           + F  CPY+P HR+P SR Q H+  C   NP     M  C YNA H
Sbjct: 4   EAFEICPYDPHHRIPLSRFQYHLASCRRKNPKKAKKMATCKYNACH 49


>BC105587-1|AAI05588.1|  167|Homo sapiens family with sequence
           similarity 112, member B protein.
          Length = 167

 Score = 37.9 bits (84), Expect = 0.043
 Identities = 15/50 (30%), Positives = 26/50 (52%), Gaps = 4/50 (8%)
 Frame = +1

Query: 121 DPFVSCPYNPIHRVPRSRLQRHIVKCEWINP----TMIACPYNATHRYTR 258
           +  + CPY+  H++   R   H++KC   +P     +  CP+NA H+  R
Sbjct: 12  EKLLQCPYDKNHQIRACRFPYHLIKCRKNHPDVASKLATCPFNARHQVPR 61



 Score = 32.7 bits (71), Expect = 1.6
 Identities = 10/23 (43%), Positives = 16/23 (69%)
 Frame = +1

Query: 133 SCPYNPIHRVPRSRLQRHIVKCE 201
           +CP+N  H+VPR+ +  HI  C+
Sbjct: 50  TCPFNARHQVPRAEISHHISSCD 72


>BC021179-1|AAH21179.1|  167|Homo sapiens family with sequence
           similarity 112, member B protein.
          Length = 167

 Score = 37.9 bits (84), Expect = 0.043
 Identities = 15/50 (30%), Positives = 26/50 (52%), Gaps = 4/50 (8%)
 Frame = +1

Query: 121 DPFVSCPYNPIHRVPRSRLQRHIVKCEWINP----TMIACPYNATHRYTR 258
           +  + CPY+  H++   R   H++KC   +P     +  CP+NA H+  R
Sbjct: 12  EKLLQCPYDKNHQIRACRFPYHLIKCRKNHPDVASKLATCPFNARHQVPR 61



 Score = 32.7 bits (71), Expect = 1.6
 Identities = 10/23 (43%), Positives = 16/23 (69%)
 Frame = +1

Query: 133 SCPYNPIHRVPRSRLQRHIVKCE 201
           +CP+N  H+VPR+ +  HI  C+
Sbjct: 50  TCPFNARHQVPRAEISHHISSCD 72


>AK098819-1|BAC05423.1|  167|Homo sapiens protein ( Homo sapiens
           cDNA FLJ25953 fis, clone TST01594. ).
          Length = 167

 Score = 37.9 bits (84), Expect = 0.043
 Identities = 15/50 (30%), Positives = 26/50 (52%), Gaps = 4/50 (8%)
 Frame = +1

Query: 121 DPFVSCPYNPIHRVPRSRLQRHIVKCEWINP----TMIACPYNATHRYTR 258
           +  + CPY+  H++   R   H++KC   +P     +  CP+NA H+  R
Sbjct: 12  EKLLQCPYDKNHQIRACRFPYHLIKCRKNHPDVASKLATCPFNARHQVPR 61



 Score = 32.7 bits (71), Expect = 1.6
 Identities = 10/23 (43%), Positives = 16/23 (69%)
 Frame = +1

Query: 133 SCPYNPIHRVPRSRLQRHIVKCE 201
           +CP+N  H+VPR+ +  HI  C+
Sbjct: 50  TCPFNARHQVPRAEISHHISSCD 72


>BC114631-1|AAI14632.1|  339|Homo sapiens chromosome 6 open reading
           frame 151 protein.
          Length = 339

 Score = 33.1 bits (72), Expect = 1.2
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = +1

Query: 118 DDPFVSCPYNPIHRVPRSRLQRHIVKC 198
           +D  V CPY+  H +P+S L +H+  C
Sbjct: 52  EDEVVICPYDSNHHMPKSSLAKHMASC 78


>BC114630-1|AAI14631.1|  339|Homo sapiens chromosome 6 open reading
           frame 151 protein.
          Length = 339

 Score = 33.1 bits (72), Expect = 1.2
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = +1

Query: 118 DDPFVSCPYNPIHRVPRSRLQRHIVKC 198
           +D  V CPY+  H +P+S L +H+  C
Sbjct: 52  EDEVVICPYDSNHHMPKSSLAKHMASC 78


>AL390026-2|CAI20238.1|  339|Homo sapiens chromosome 6 open reading
           frame 151 protein.
          Length = 339

 Score = 33.1 bits (72), Expect = 1.2
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = +1

Query: 118 DDPFVSCPYNPIHRVPRSRLQRHIVKC 198
           +D  V CPY+  H +P+S L +H+  C
Sbjct: 52  EDEVVICPYDSNHHMPKSSLAKHMASC 78


>AL031058-2|CAI21647.2|  339|Homo sapiens chromosome 6 open reading
           frame 151 protein.
          Length = 339

 Score = 33.1 bits (72), Expect = 1.2
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = +1

Query: 118 DDPFVSCPYNPIHRVPRSRLQRHIVKC 198
           +D  V CPY+  H +P+S L +H+  C
Sbjct: 52  EDEVVICPYDSNHHMPKSSLAKHMASC 78


>AK056796-1|BAB71287.1|  144|Homo sapiens protein ( Homo sapiens
           cDNA FLJ32234 fis, clone PLACE6004687. ).
          Length = 144

 Score = 33.1 bits (72), Expect = 1.2
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = +1

Query: 118 DDPFVSCPYNPIHRVPRSRLQRHIVKC 198
           +D  V CPY+  H +P+S L +H+  C
Sbjct: 52  EDEVVICPYDSNHHMPKSSLAKHMASC 78


>CR457084-1|CAG33365.1|  260|Homo sapiens UPK1B protein.
          Length = 260

 Score = 31.9 bits (69), Expect = 2.8
 Identities = 19/67 (28%), Positives = 30/67 (44%), Gaps = 1/67 (1%)
 Frame = -3

Query: 541 ILF*N*IVNCTQICGLQYTQQYVYIVRSNSFPYLSI*ELMNQSSQ-ISWFGSVSGKYSFC 365
           ++F N I+ C   CG+  T + ++ V     PY  +    N      +W G   G   FC
Sbjct: 15  LIFGNVIIGC---CGIALTAECIFFVSDQHSPYPLLEATDNDDIYGAAWIGIFVGICLFC 71

Query: 364 NIILGVV 344
             +LG+V
Sbjct: 72  LSVLGIV 78


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 110,390,005
Number of Sequences: 237096
Number of extensions: 2252384
Number of successful extensions: 4441
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 4257
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4434
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9980595722
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)