Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20418
(752 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q5TLD3 Cluster: Replication protein A large subunit; n=... 175 1e-42
UniRef50_UPI0000DB7065 Cluster: PREDICTED: similar to Replicatio... 93 5e-18
UniRef50_Q24492 Cluster: Replication protein A 70 kDa DNA-bindin... 83 7e-15
UniRef50_UPI0000E4817A Cluster: PREDICTED: similar to Rpa1 prote... 65 2e-09
UniRef50_A7SJL0 Cluster: Predicted protein; n=2; Nematostella ve... 64 5e-09
UniRef50_UPI0000D570D3 Cluster: PREDICTED: similar to CG9633-PA;... 62 1e-08
UniRef50_P27694 Cluster: Replication protein A 70 kDa DNA-bindin... 58 3e-07
UniRef50_Q7TP21 Cluster: Cb1-727; n=1; Rattus norvegicus|Rep: Cb... 51 3e-05
UniRef50_Q66NI8 Cluster: Replication protein A 70 kDa subunit; n... 50 8e-05
UniRef50_UPI0000D57804 Cluster: PREDICTED: similar to CG9633-PA;... 48 2e-04
UniRef50_Q5KIJ9 Cluster: Damaged DNA binding protein, putative; ... 48 2e-04
UniRef50_A3LMX2 Cluster: DNA replication factor A; n=2; Saccharo... 43 0.009
UniRef50_Q2HGN8 Cluster: Putative uncharacterized protein; n=1; ... 42 0.016
UniRef50_Q7Q2A4 Cluster: ENSANGP00000015950; n=1; Anopheles gamb... 39 0.15
UniRef50_Q00VA0 Cluster: ENSANGP00000015823; n=1; Ostreococcus t... 38 0.35
UniRef50_Q9FHJ6 Cluster: Replication protein A1-like; n=3; Arabi... 36 1.4
UniRef50_A2EAN7 Cluster: Putative uncharacterized protein; n=1; ... 36 1.4
UniRef50_Q3E6P3 Cluster: Uncharacterized protein At2g06510.2; n=... 35 1.9
UniRef50_UPI00006CB002 Cluster: hypothetical protein TTHERM_0023... 35 2.5
UniRef50_Q6ZR68 Cluster: CDNA FLJ46594 fis, clone THYMU3045692; ... 34 3.3
UniRef50_A3H8B3 Cluster: Membrane protein, putative; n=1; Caldiv... 34 3.3
UniRef50_UPI0000EBD3A6 Cluster: PREDICTED: hypothetical protein;... 34 4.3
UniRef50_UPI00006CB81E Cluster: conserved hypothetical protein; ... 34 4.3
UniRef50_A0BGD2 Cluster: Chromosome undetermined scaffold_106, w... 34 4.3
UniRef50_Q87SE7 Cluster: Vitamin B12-binding protein precursor; ... 34 4.3
UniRef50_A7CP46 Cluster: Peptidase domain protein; n=1; Opitutac... 33 5.7
UniRef50_Q4DHW2 Cluster: Putative uncharacterized protein; n=2; ... 33 5.7
UniRef50_A7AVL8 Cluster: Membrane protein, putative; n=1; Babesi... 33 5.7
UniRef50_A3LZK2 Cluster: Hypothetical beta-1,6-N-acetylglucosami... 33 5.7
UniRef50_A7H8D7 Cluster: Putative uncharacterized protein precur... 33 7.6
UniRef50_A0H458 Cluster: 2-oxoglutarate dehydrogenase, E2 compon... 33 7.6
UniRef50_Q2HEK3 Cluster: Putative uncharacterized protein; n=1; ... 33 7.6
UniRef50_A5DV16 Cluster: Putative uncharacterized protein; n=2; ... 33 7.6
UniRef50_Q1H094 Cluster: Peptidase M23B; n=1; Methylobacillus fl... 33 10.0
UniRef50_Q07RL6 Cluster: Putative CheA signal transduction histi... 33 10.0
UniRef50_P59076 Cluster: Methionyl-tRNA synthetase; n=19; Bacter... 33 10.0
>UniRef50_Q5TLD3 Cluster: Replication protein A large subunit; n=1;
Bombyx mori|Rep: Replication protein A large subunit -
Bombyx mori (Silk moth)
Length = 598
Score = 175 bits (426), Expect = 1e-42
Identities = 84/84 (100%), Positives = 84/84 (100%)
Frame = -1
Query: 254 FVTTLLKNVGKGEKRVIIILALTIIANGRDVRHKIGNPQPWSEEATSAQRPEPKPAPVTP 75
FVTTLLKNVGKGEKRVIIILALTIIANGRDVRHKIGNPQPWSEEATSAQRPEPKPAPVTP
Sbjct: 81 FVTTLLKNVGKGEKRVIIILALTIIANGRDVRHKIGNPQPWSEEATSAQRPEPKPAPVTP 140
Query: 74 KFTAKVEPKAANLDSSMLSVKMTN 3
KFTAKVEPKAANLDSSMLSVKMTN
Sbjct: 141 KFTAKVEPKAANLDSSMLSVKMTN 164
Score = 166 bits (403), Expect = 6e-40
Identities = 81/91 (89%), Positives = 84/91 (92%)
Frame = -2
Query: 493 MSYNLSEGALETIMKGGNYDAPIIQMLGTKKIQGNDAGDRYRLLVSDGKYTYSFAMLATQ 314
MSYNLSEGALETIMKGGNYDAPIIQMLGTKKIQGNDAGDRYRLLVSDGKYTYSFAMLATQ
Sbjct: 1 MSYNLSEGALETIMKGGNYDAPIIQMLGTKKIQGNDAGDRYRLLVSDGKYTYSFAMLATQ 60
Query: 313 LNIMLLSGELTDYSVIQVDHLLRHC*RMLGK 221
LNIMLLSGELTDYSVIQVD + + +GK
Sbjct: 61 LNIMLLSGELTDYSVIQVDQFVTTLLKNVGK 91
>UniRef50_UPI0000DB7065 Cluster: PREDICTED: similar to Replication
Protein A 70 CG9633-PA; n=2; Apocrita|Rep: PREDICTED:
similar to Replication Protein A 70 CG9633-PA - Apis
mellifera
Length = 597
Score = 93.5 bits (222), Expect = 5e-18
Identities = 45/95 (47%), Positives = 64/95 (67%)
Frame = -2
Query: 487 YNLSEGALETIMKGGNYDAPIIQMLGTKKIQGNDAGDRYRLLVSDGKYTYSFAMLATQLN 308
Y+L+EGAL+ IM G + D P++Q+LG KK+ + +G+RYRLLVSDGK SF MLATQLN
Sbjct: 2 YSLTEGALDKIMNGIDVDKPVLQILGHKKLSSSSSGERYRLLVSDGKRVNSFTMLATQLN 61
Query: 307 IMLLSGELTDYSVIQVDHLLRHC*RMLGKVKSVLL 203
M+ LT++S+ Q++ GK K V++
Sbjct: 62 SMITENILTEFSICQINRYAISMVNNAGKQKRVMV 96
Score = 39.1 bits (87), Expect = 0.12
Identities = 26/87 (29%), Positives = 45/87 (51%), Gaps = 4/87 (4%)
Frame = -1
Query: 254 FVTTLLKNVGKGEKRVIIILALTIIANGRDVRHKIGNPQPWSEEATSAQRPEPKPA---- 87
+ +++ N GK +KRV++IL + + G +V HKIGNP + EA +P+ + A
Sbjct: 80 YAISMVNNAGK-QKRVMVILNIDLKVPGDEVGHKIGNPT--NAEADGDSKPQAQIAQSAQ 136
Query: 86 PVTPKFTAKVEPKAANLDSSMLSVKMT 6
V P+ ++P SS ++ T
Sbjct: 137 SVVPQQQTNLKPNHNMQQSSTNNISTT 163
>UniRef50_Q24492 Cluster: Replication protein A 70 kDa DNA-binding
subunit; n=4; Diptera|Rep: Replication protein A 70 kDa
DNA-binding subunit - Drosophila melanogaster (Fruit
fly)
Length = 603
Score = 83.0 bits (196), Expect = 7e-15
Identities = 41/94 (43%), Positives = 61/94 (64%)
Frame = -2
Query: 484 NLSEGALETIMKGGNYDAPIIQMLGTKKIQGNDAGDRYRLLVSDGKYTYSFAMLATQLNI 305
+LS G + IM G DAP++Q+L KKI +RYR+L+SDGKY S+AMLA+QLN+
Sbjct: 5 SLSTGVIARIMHGEVVDAPVLQILAIKKINSAADSERYRILISDGKYFNSYAMLASQLNV 64
Query: 304 MLLSGELTDYSVIQVDHLLRHC*RMLGKVKSVLL 203
M +GEL +++++Q+D + G K VL+
Sbjct: 65 MQHNGELEEFTIVQLDKYVTSLVGKDGAGKRVLI 98
Score = 44.0 bits (99), Expect = 0.004
Identities = 30/80 (37%), Positives = 46/80 (57%), Gaps = 1/80 (1%)
Frame = -1
Query: 254 FVTTLLKNVGKGEKRVIIILALTIIANGRDVRHKIGNPQPWSEEATSAQRPEPKPAPVT- 78
+VT+L+ G G KRV+II LT++ G +V+ KIG P + E + Q PKPA +
Sbjct: 82 YVTSLVGKDGAG-KRVLIISELTVVNPGAEVKSKIGEPVTY--ENAAKQDLAPKPAVTSN 138
Query: 77 PKFTAKVEPKAANLDSSMLS 18
K AK EP N ++ +++
Sbjct: 139 SKPIAKKEPSHNNNNNIVMN 158
>UniRef50_UPI0000E4817A Cluster: PREDICTED: similar to Rpa1 protein
isoform 2; n=2; Strongylocentrotus purpuratus|Rep:
PREDICTED: similar to Rpa1 protein isoform 2 -
Strongylocentrotus purpuratus
Length = 839
Score = 65.3 bits (152), Expect = 2e-09
Identities = 35/73 (47%), Positives = 50/73 (68%), Gaps = 3/73 (4%)
Frame = -2
Query: 493 MSYNLSEGALETIMKGGNYDAPIIQMLGTKKIQGNDAG---DRYRLLVSDGKYTYSFAML 323
M+ LS GA+ I +G N P++Q+L KK+ +G DRYRL++SDG++T + AML
Sbjct: 1 MNNLLSRGAIAAIFRGENVSCPVLQLLACKKMNAAASGKAVDRYRLMLSDGEHTCT-AML 59
Query: 322 ATQLNIMLLSGEL 284
ATQLN M+ +GEL
Sbjct: 60 ATQLNEMVSTGEL 72
>UniRef50_A7SJL0 Cluster: Predicted protein; n=2; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 626
Score = 63.7 bits (148), Expect = 5e-09
Identities = 37/87 (42%), Positives = 55/87 (63%), Gaps = 8/87 (9%)
Frame = -2
Query: 493 MSYNLSEGALETIMKGGNY------DAPIIQMLGTKKIQGN--DAGDRYRLLVSDGKYTY 338
M+ LSEGA++ I+ + + P+ Q+LG KKIQ DA DRYRL++SDG +
Sbjct: 1 MTITLSEGAIQEILNTPSDQPDRLPEQPVFQILGLKKIQPKQGDASDRYRLVLSDGVLIH 60
Query: 337 SFAMLATQLNIMLLSGELTDYSVIQVD 257
+ AMLATQLN + GE+ +V+++D
Sbjct: 61 TSAMLATQLNDKVTDGEIEVKAVVRLD 87
>UniRef50_UPI0000D570D3 Cluster: PREDICTED: similar to CG9633-PA;
n=1; Tribolium castaneum|Rep: PREDICTED: similar to
CG9633-PA - Tribolium castaneum
Length = 581
Score = 62.1 bits (144), Expect = 1e-08
Identities = 35/98 (35%), Positives = 58/98 (59%), Gaps = 3/98 (3%)
Frame = -2
Query: 490 SYNLSEGALETIMKGGNYDAPIIQMLGTKKIQ--GNDAGDRYRLLVSDGKYTYSFAMLAT 317
+Y LSEGAL+TIM GG P++Q+LGTKK+ G+D+ R RL++SDG + + A+
Sbjct: 4 AYKLSEGALQTIMYGGEVIDPLVQILGTKKMSPGGSDSSSRLRLMISDGLHKVNIAVFTV 63
Query: 316 QLNIMLLSGELTD-YSVIQVDHLLRHC*RMLGKVKSVL 206
N L L +++I++ L + + +V ++L
Sbjct: 64 PKNDQTLPHVLEQVFTIIKLKRYLSNVIKNNRRVIAIL 101
Score = 37.1 bits (82), Expect = 0.46
Identities = 20/44 (45%), Positives = 24/44 (54%)
Frame = -1
Query: 239 LKNVGKGEKRVIIILALTIIANGRDVRHKIGNPQPWSEEATSAQ 108
L NV K +RVI IL L ++A G V IGNP S+ T Q
Sbjct: 87 LSNVIKNNRRVIAILELEVVARGEFVGQIIGNPVSLSDSETLTQ 130
>UniRef50_P27694 Cluster: Replication protein A 70 kDa DNA-binding
subunit; n=31; Deuterostomia|Rep: Replication protein A
70 kDa DNA-binding subunit - Homo sapiens (Human)
Length = 616
Score = 57.6 bits (133), Expect = 3e-07
Identities = 32/79 (40%), Positives = 49/79 (62%), Gaps = 1/79 (1%)
Frame = -2
Query: 481 LSEGALETIMKGGNYDA-PIIQMLGTKKIQGNDAGDRYRLLVSDGKYTYSFAMLATQLNI 305
LSEGA+ IM+ G+ + PI+Q++ + I ++ RYRLL+SDG T S MLATQLN
Sbjct: 5 LSEGAIAAIMQKGDTNIKPILQVINIRPITTGNSPPRYRLLMSDGLNTLSSFMLATQLNP 64
Query: 304 MLLSGELTDYSVIQVDHLL 248
++ +L+ V Q+ +
Sbjct: 65 LVEEEQLSSNCVCQIHRFI 83
Score = 39.5 bits (88), Expect = 0.087
Identities = 20/62 (32%), Positives = 35/62 (56%)
Frame = -1
Query: 233 NVGKGEKRVIIILALTIIANGRDVRHKIGNPQPWSEEATSAQRPEPKPAPVTPKFTAKVE 54
N K +RV+I++ L ++ + V KIGNP P++E Q P PA +P +++ +
Sbjct: 85 NTLKDGRRVVILMELEVLKSAEAVGVKIGNPVPYNEGLGQPQVAPPAPA-ASPAASSRPQ 143
Query: 53 PK 48
P+
Sbjct: 144 PQ 145
>UniRef50_Q7TP21 Cluster: Cb1-727; n=1; Rattus norvegicus|Rep:
Cb1-727 - Rattus norvegicus (Rat)
Length = 680
Score = 51.2 bits (117), Expect = 3e-05
Identities = 26/70 (37%), Positives = 40/70 (57%)
Frame = -2
Query: 457 IMKGGNYDAPIIQMLGTKKIQGNDAGDRYRLLVSDGKYTYSFAMLATQLNIMLLSGELTD 278
+ +G P++Q++ + I ++ RYRLL+SDG T S MLATQLN ++ G+L
Sbjct: 1 MQQGDTSIKPVLQVINIRPITTGNSPPRYRLLMSDGLNTLSSFMLATQLNALVEGGQLAS 60
Query: 277 YSVIQVDHLL 248
V QV +
Sbjct: 61 NCVCQVHRFI 70
Score = 38.3 bits (85), Expect = 0.20
Identities = 21/72 (29%), Positives = 37/72 (51%)
Frame = -1
Query: 251 VTTLLKNVGKGEKRVIIILALTIIANGRDVRHKIGNPQPWSEEATSAQRPEPKPAPVTPK 72
V + N K +RV+I++ L ++ + +V KIGNP P++E Q + TP
Sbjct: 66 VHRFIVNTLKDGRRVVILMDLEVVKSAGEVGVKIGNPVPYNEGHAQQQAVSAPASAATPP 125
Query: 71 FTAKVEPKAANL 36
+K +P+ +L
Sbjct: 126 -ASKPQPQNGSL 136
>UniRef50_Q66NI8 Cluster: Replication protein A 70 kDa subunit; n=2;
Ustilago maydis|Rep: Replication protein A 70 kDa
subunit - Ustilago maydis (Smut fungus)
Length = 623
Score = 49.6 bits (113), Expect = 8e-05
Identities = 34/89 (38%), Positives = 53/89 (59%), Gaps = 11/89 (12%)
Frame = -2
Query: 493 MSYN-LSEGALETIMK-----GGNYDAPIIQMLGTKKIQGN-----DAGDRYRLLVSDGK 347
MS N LS+GA+ +++ + P+ Q+L KKIQ + + GDRYR+++SDG
Sbjct: 1 MSLNDLSQGAIAQMIQTSDPASSSVQNPVCQILSIKKIQASATSAANVGDRYRIILSDG- 59
Query: 346 YTYSFAMLATQLNIMLLSGELTDYSVIQV 260
Y+ AMLA+Q M+ SGEL +++V
Sbjct: 60 INYAQAMLASQKRSMVESGELEKNCLVRV 88
>UniRef50_UPI0000D57804 Cluster: PREDICTED: similar to CG9633-PA;
n=1; Tribolium castaneum|Rep: PREDICTED: similar to
CG9633-PA - Tribolium castaneum
Length = 591
Score = 48.0 bits (109), Expect = 2e-04
Identities = 24/58 (41%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
Frame = -2
Query: 493 MSYNLSEGALETIMKGGNYDAPIIQMLGTKKIQGNDA-GDRYRLLVSDGKYTYSFAML 323
M L+ GAL IMKG + P++Q+L +KKI A +RYR+ SDG Y+ ++ +L
Sbjct: 1 MKDKLTAGALLRIMKGQEVEEPLVQVLVSKKISSRSAETERYRIWASDGDYSITYGIL 58
>UniRef50_Q5KIJ9 Cluster: Damaged DNA binding protein, putative;
n=2; Filobasidiella neoformans|Rep: Damaged DNA binding
protein, putative - Cryptococcus neoformans
(Filobasidiella neoformans)
Length = 597
Score = 48.0 bits (109), Expect = 2e-04
Identities = 26/58 (44%), Positives = 40/58 (68%), Gaps = 2/58 (3%)
Frame = -2
Query: 427 IIQMLGTKKIQGND--AGDRYRLLVSDGKYTYSFAMLATQLNIMLLSGELTDYSVIQV 260
++Q+L KKI D A DRYR ++SDG+Y + AMLATQLN + S ++ +S+++V
Sbjct: 26 VVQVLNVKKIASTDTTAVDRYRAILSDGQY-FIQAMLATQLNHFVESKQVDKHSLVKV 82
>UniRef50_A3LMX2 Cluster: DNA replication factor A; n=2;
Saccharomycetales|Rep: DNA replication factor A - Pichia
stipitis (Yeast)
Length = 616
Score = 42.7 bits (96), Expect = 0.009
Identities = 29/82 (35%), Positives = 45/82 (54%), Gaps = 4/82 (4%)
Frame = -2
Query: 493 MSYNLSEGALE---TIMKGGNYDAPII-QMLGTKKIQGNDAGDRYRLLVSDGKYTYSFAM 326
MSYNLS GAL +I K + + PII Q+ K + D +YRLL++DG+Y + +
Sbjct: 1 MSYNLSGGALRDVFSIKKHASVNTPIILQVTNIKPVLYKDEVKKYRLLLNDGQYA-AQGL 59
Query: 325 LATQLNIMLLSGELTDYSVIQV 260
+ L + + YS+I+V
Sbjct: 60 VDEPCITYLQNNNFSRYSIIEV 81
>UniRef50_Q2HGN8 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 586
Score = 41.9 bits (94), Expect = 0.016
Identities = 28/83 (33%), Positives = 46/83 (55%), Gaps = 9/83 (10%)
Frame = -2
Query: 481 LSEGALETIMKGGN-----YDAPIIQMLGTKKIQ----GNDAGDRYRLLVSDGKYTYSFA 329
+S+GA+E I N Y P++Q L ++ G A +RYR+++SD + Y
Sbjct: 6 ISQGAIEAIFLDANRAAVHYPVPVMQCLHITTLESKGPGTAAPERYRIVLSDLR-NYVQC 64
Query: 328 MLATQLNIMLLSGELTDYSVIQV 260
MLATQ N ++ G+L S+++V
Sbjct: 65 MLATQANHVMHDGQLQRGSIVRV 87
>UniRef50_Q7Q2A4 Cluster: ENSANGP00000015950; n=1; Anopheles gambiae
str. PEST|Rep: ENSANGP00000015950 - Anopheles gambiae
str. PEST
Length = 279
Score = 38.7 bits (86), Expect = 0.15
Identities = 19/52 (36%), Positives = 24/52 (46%)
Frame = -1
Query: 203 IILALTIIANGRDVRHKIGNPQPWSEEATSAQRPEPKPAPVTPKFTAKVEPK 48
+I T++ANG D GN P E T+ P P TP AK +PK
Sbjct: 97 LIQVTTVVANGDDDNSSSGNEAPAKRETTTVVVPSPTTTTTTPLPAAKQQPK 148
>UniRef50_Q00VA0 Cluster: ENSANGP00000015823; n=1; Ostreococcus
tauri|Rep: ENSANGP00000015823 - Ostreococcus tauri
Length = 97
Score = 37.5 bits (83), Expect = 0.35
Identities = 19/59 (32%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Frame = -2
Query: 430 PIIQMLGTKKIQGNDAGDR-YRLLVSDGKYTYSFAMLATQLNIMLLSGELTDYSVIQVD 257
P++Q+ K I+ + R +RLLVSDG + A++A +LN M E++ ++++++D
Sbjct: 25 PLVQVFDKKPIKTREGEPRRFRLLVSDGSFA-GQALVAGELNDMCAREEISKFTILRLD 82
>UniRef50_Q9FHJ6 Cluster: Replication protein A1-like; n=3;
Arabidopsis thaliana|Rep: Replication protein A1-like -
Arabidopsis thaliana (Mouse-ear cress)
Length = 853
Score = 35.5 bits (78), Expect = 1.4
Identities = 27/91 (29%), Positives = 48/91 (52%), Gaps = 9/91 (9%)
Frame = -2
Query: 493 MSYNLSEGALETIMKG---GNYDA-PIIQMLGTKKIQGN-----DAGDRYRLLVSDGKYT 341
M+ +L+EG + ++ G D P++Q+ K IQ ++ +RY+ L+SDG
Sbjct: 1 MAVSLTEGVVMKMLNGEVTSETDMMPVLQVTELKLIQSKLHQNQESSNRYKFLLSDGT-D 59
Query: 340 YSFAMLATQLNIMLLSGELTDYSVIQVDHLL 248
+ ML T LN ++ G + SVI++ H +
Sbjct: 60 LAAGMLNTSLNSLVNQGTIQLGSVIRLTHYI 90
>UniRef50_A2EAN7 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 852
Score = 35.5 bits (78), Expect = 1.4
Identities = 24/70 (34%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Frame = -1
Query: 209 VIIILALTIIANGRDVRHKIGNPQPWSEEATSAQRPEPKPAP-VTPKFTAKVEPKAANLD 33
V+ LAL + AN D ++ + Q +SE+A A K P + P F K++PK
Sbjct: 500 VVKALALLLFANHVDGGNQENSSQEYSEKAEDALETIEKNFPQMLPHFIMKLDPKLIQST 559
Query: 32 SSMLSVKMTN 3
SS L K+ N
Sbjct: 560 SSKLFEKINN 569
>UniRef50_Q3E6P3 Cluster: Uncharacterized protein At2g06510.2; n=6;
Magnoliophyta|Rep: Uncharacterized protein At2g06510.2 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 617
Score = 35.1 bits (77), Expect = 1.9
Identities = 21/59 (35%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Frame = -2
Query: 424 IQMLGTKKIQGNDAGDRYRLLVSDGKYTYSFAMLATQLNIMLLSGELTDYSVIQ-VDHL 251
I+M+G + + + RYR L+SDG + AM+A QLN + SG+ S++Q +D++
Sbjct: 6 IKMIGRSQERSQE---RYRFLISDG-VSAQHAMVAVQLNDRVKSGQFEKGSIVQLIDYI 60
>UniRef50_UPI00006CB002 Cluster: hypothetical protein
TTHERM_00237460; n=1; Tetrahymena thermophila SB210|Rep:
hypothetical protein TTHERM_00237460 - Tetrahymena
thermophila SB210
Length = 895
Score = 34.7 bits (76), Expect = 2.5
Identities = 18/49 (36%), Positives = 26/49 (53%)
Frame = -2
Query: 628 LSDHIVTLFNLQFKTQGSETRQQKQNCQTCDFKLKSKYNNTSKSKMSYN 482
L+ IV + LQ +T+ R Q + C+F L KYNN +K +M N
Sbjct: 628 LTQSIVVIKKLQIQTEIIVQRHSLQKKKHCNFCLVCKYNNENKDEMKTN 676
>UniRef50_Q6ZR68 Cluster: CDNA FLJ46594 fis, clone THYMU3045692;
n=7; Euteleostomi|Rep: CDNA FLJ46594 fis, clone
THYMU3045692 - Homo sapiens (Human)
Length = 368
Score = 34.3 bits (75), Expect = 3.3
Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = +1
Query: 352 HLIPIICIYPQ-HHSLESSLYPAFVLLVHHNYHPSLWSLRHP 474
HL CI+P H S+ S+YP L +H HPS+ HP
Sbjct: 291 HLFIHPCIHPSIHPSIHVSIYPTMHLSIHPCIHPSIPPCIHP 332
Score = 32.7 bits (71), Expect = 10.0
Identities = 15/35 (42%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Frame = +1
Query: 373 IYPQ-HHSLESSLYPAFVLLVHHNYHPSLWSLRHP 474
IYP H S+ SS+YP +H + HPS+++ HP
Sbjct: 178 IYPSIHASIHSSMYPC----IHPSIHPSIYARMHP 208
>UniRef50_A3H8B3 Cluster: Membrane protein, putative; n=1;
Caldivirga maquilingensis IC-167|Rep: Membrane protein,
putative - Caldivirga maquilingensis IC-167
Length = 934
Score = 34.3 bits (75), Expect = 3.3
Identities = 25/81 (30%), Positives = 42/81 (51%), Gaps = 6/81 (7%)
Frame = -2
Query: 517 YNNTS----KSKMSYN-LSEGALETIMKGGNYDAPIIQMLGTKKIQGNDAGDRYRLL-VS 356
YN++S K SYN LS+ + ++ + + G K I G DA ++Y + V
Sbjct: 690 YNSSSIAILKVTTSYNALSDKLIPVYVRLTSLANQVASEYGVKVIVGGDAANKYYFVKVF 749
Query: 355 DGKYTYSFAMLATQLNIMLLS 293
+ ++ Y ++L LNI+LLS
Sbjct: 750 EDQFYYKISILIIALNILLLS 770
>UniRef50_UPI0000EBD3A6 Cluster: PREDICTED: hypothetical protein;
n=1; Bos taurus|Rep: PREDICTED: hypothetical protein -
Bos taurus
Length = 207
Score = 33.9 bits (74), Expect = 4.3
Identities = 18/49 (36%), Positives = 23/49 (46%)
Frame = -1
Query: 176 NGRDVRHKIGNPQPWSEEATSAQRPEPKPAPVTPKFTAKVEPKAANLDS 30
+ R R + P P EA A RP P AP P+ +A V P +L S
Sbjct: 136 SARRRRGRRAPPAPRGPEAGPAARPAPAAAPAQPRASAAVPPPGCDLQS 184
>UniRef50_UPI00006CB81E Cluster: conserved hypothetical protein;
n=1; Tetrahymena thermophila SB210|Rep: conserved
hypothetical protein - Tetrahymena thermophila SB210
Length = 1152
Score = 33.9 bits (74), Expect = 4.3
Identities = 20/67 (29%), Positives = 29/67 (43%), Gaps = 1/67 (1%)
Frame = -2
Query: 595 QFKTQGSETRQQKQN-CQTCDFKLKSKYNNTSKSKMSYNLSEGALETIMKGGNYDAPIIQ 419
Q ++QGS QKQ ++ L S NN +K +YN S+ + NY +
Sbjct: 694 QLQSQGSSDEAQKQRQFSQKNYGLNSNSNNNQNNKQTYNQSQNVVAQNNPSNNYQQNNFK 753
Query: 418 MLGTKKI 398
M KI
Sbjct: 754 MSNQSKI 760
>UniRef50_A0BGD2 Cluster: Chromosome undetermined scaffold_106,
whole genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_106,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 348
Score = 33.9 bits (74), Expect = 4.3
Identities = 17/59 (28%), Positives = 28/59 (47%)
Frame = -1
Query: 215 KRVIIILALTIIANGRDVRHKIGNPQPWSEEATSAQRPEPKPAPVTPKFTAKVEPKAAN 39
KR++I L + + R V H P+ +A + +PK AP + +PKAA+
Sbjct: 2 KRILICLLFISLISARAVNHLTDAPKAADPKAADPKAADPKAAPPKTEAPKAADPKAAD 60
>UniRef50_Q87SE7 Cluster: Vitamin B12-binding protein precursor;
n=11; Vibrionales|Rep: Vitamin B12-binding protein
precursor - Vibrio parahaemolyticus
Length = 275
Score = 33.9 bits (74), Expect = 4.3
Identities = 17/49 (34%), Positives = 26/49 (53%)
Frame = -2
Query: 529 LKSKYNNTSKSKMSYNLSEGALETIMKGGNYDAPIIQMLGTKKIQGNDA 383
LK+KYN T K + Y LSE + T+ G N+ + + G + + N A
Sbjct: 148 LKAKYNTTEKVRYFYQLSEKPIITV-AGKNWPSEVFNFCGGENVFANTA 195
>UniRef50_A7CP46 Cluster: Peptidase domain protein; n=1; Opitutaceae
bacterium TAV2|Rep: Peptidase domain protein -
Opitutaceae bacterium TAV2
Length = 547
Score = 33.5 bits (73), Expect = 5.7
Identities = 20/68 (29%), Positives = 38/68 (55%), Gaps = 5/68 (7%)
Frame = -1
Query: 224 KGEKRVIIILALTIIANGRDVRHKIGNPQPWSEEATSAQRP-----EPKPAPVTPKFTAK 60
KGE+ V+ ++A + + D + +IG P+P++E A +A+ +PKP + P F+
Sbjct: 192 KGERLVLDVMARRL-DSPLDAKLRIGPPKPFNEAANAAEAAALAAGKPKPRRIAPPFSDD 250
Query: 59 VEPKAANL 36
V+ + L
Sbjct: 251 VKDERYGL 258
>UniRef50_Q4DHW2 Cluster: Putative uncharacterized protein; n=2;
Trypanosoma cruzi|Rep: Putative uncharacterized protein -
Trypanosoma cruzi
Length = 1104
Score = 33.5 bits (73), Expect = 5.7
Identities = 16/34 (47%), Positives = 18/34 (52%)
Frame = -1
Query: 149 GNPQPWSEEATSAQRPEPKPAPVTPKFTAKVEPK 48
GNP+P S TSA P P P P+ P TA K
Sbjct: 1071 GNPRPQSVPLTSAPVPVPIPLPIAPMATAPFSRK 1104
>UniRef50_A7AVL8 Cluster: Membrane protein, putative; n=1; Babesia
bovis|Rep: Membrane protein, putative - Babesia bovis
Length = 1016
Score = 33.5 bits (73), Expect = 5.7
Identities = 17/36 (47%), Positives = 20/36 (55%), Gaps = 3/36 (8%)
Frame = -1
Query: 146 NPQPWSEEATSAQRPEP---KPAPVTPKFTAKVEPK 48
+P P TS + PEP +PAP TPK A EPK
Sbjct: 366 SPTPKEPAPTSPKEPEPTTKEPAPTTPKQPAPAEPK 401
>UniRef50_A3LZK2 Cluster: Hypothetical
beta-1,6-N-acetylglucosaminyltransferase, contains WSC
domain; n=1; Pichia stipitis|Rep: Hypothetical
beta-1,6-N-acetylglucosaminyltransferase, contains WSC
domain - Pichia stipitis (Yeast)
Length = 572
Score = 33.5 bits (73), Expect = 5.7
Identities = 19/52 (36%), Positives = 28/52 (53%), Gaps = 3/52 (5%)
Frame = -2
Query: 511 NTSKSKMSYNLSEGALE---TIMKGGNYDAPIIQMLGTKKIQGNDAGDRYRL 365
NT S + ++L +G LE + G +YD P +Q L KIQG D + + L
Sbjct: 358 NTENSSIFFSLDDGQLEVSSSFFMGDSYDQPGLQGLCASKIQGIDGYNNWVL 409
>UniRef50_A7H8D7 Cluster: Putative uncharacterized protein
precursor; n=1; Anaeromyxobacter sp. Fw109-5|Rep:
Putative uncharacterized protein precursor -
Anaeromyxobacter sp. Fw109-5
Length = 234
Score = 33.1 bits (72), Expect = 7.6
Identities = 15/33 (45%), Positives = 18/33 (54%)
Frame = -1
Query: 143 PQPWSEEATSAQRPEPKPAPVTPKFTAKVEPKA 45
P P + + T P PKP+P PK TAK P A
Sbjct: 73 PPPGAPKPTVEPTPAPKPSPAPPKPTAKPAPTA 105
>UniRef50_A0H458 Cluster: 2-oxoglutarate dehydrogenase, E2
component, dihydrolipoamide succinyltransferase; n=2;
Chloroflexus|Rep: 2-oxoglutarate dehydrogenase, E2
component, dihydrolipoamide succinyltransferase -
Chloroflexus aggregans DSM 9485
Length = 469
Score = 33.1 bits (72), Expect = 7.6
Identities = 17/45 (37%), Positives = 22/45 (48%)
Frame = -1
Query: 182 IANGRDVRHKIGNPQPWSEEATSAQRPEPKPAPVTPKFTAKVEPK 48
+A D R K+ +P P E T+ RP P PAP TP P+
Sbjct: 179 VAKADDSRMKVSHPTPAVIE-TAPPRPTPPPAPTTPPPAPATPPR 222
>UniRef50_Q2HEK3 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 538
Score = 33.1 bits (72), Expect = 7.6
Identities = 16/27 (59%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
Frame = -1
Query: 125 EATSAQRPEPKPAPVT-PKFTAKVEPK 48
EAT +PEPKP P T PK K EPK
Sbjct: 179 EATPEPKPEPKPEPKTEPKTEPKTEPK 205
>UniRef50_A5DV16 Cluster: Putative uncharacterized protein; n=2;
Saccharomycetaceae|Rep: Putative uncharacterized protein
- Lodderomyces elongisporus (Yeast) (Saccharomyces
elongisporus)
Length = 658
Score = 33.1 bits (72), Expect = 7.6
Identities = 22/82 (26%), Positives = 43/82 (52%), Gaps = 4/82 (4%)
Frame = -2
Query: 490 SYNLSEGALETIMKGGNYD---APII-QMLGTKKIQGNDAGDRYRLLVSDGKYTYSFAML 323
S+ LS+GAL+ +D P++ Q+ K + + +YR+L+SDG Y+ + ++
Sbjct: 3 SFPLSKGALKKAFHKDTHDKVKCPLVFQITNMKAVDTVNNQRKYRILLSDGVYS-THGLI 61
Query: 322 ATQLNIMLLSGELTDYSVIQVD 257
L + ++ Y+ IQV+
Sbjct: 62 NENCTAYLENNNVSRYATIQVN 83
>UniRef50_Q1H094 Cluster: Peptidase M23B; n=1; Methylobacillus
flagellatus KT|Rep: Peptidase M23B - Methylobacillus
flagellatus (strain KT / ATCC 51484 / DSM 6875)
Length = 333
Score = 32.7 bits (71), Expect = 10.0
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = -1
Query: 140 QPWSEEATSAQRPEPKPAPVTPKFTAKVEPKAAN 39
QP+SE A +A P P+P PV TA P A +
Sbjct: 169 QPYSEAAMNAPAPAPQPQPVAAPATATPAPAAVS 202
>UniRef50_Q07RL6 Cluster: Putative CheA signal transduction
histidine kinases; n=1; Rhodopseudomonas palustris
BisA53|Rep: Putative CheA signal transduction histidine
kinases - Rhodopseudomonas palustris (strain BisA53)
Length = 454
Score = 32.7 bits (71), Expect = 10.0
Identities = 18/50 (36%), Positives = 25/50 (50%)
Frame = -1
Query: 182 IANGRDVRHKIGNPQPWSEEATSAQRPEPKPAPVTPKFTAKVEPKAANLD 33
+A+G D + P S E A P P PV P+ A V+P+AA +D
Sbjct: 173 LASGNDAATE---PTATSAEPPRADAPPPAAPPVAPQSFATVQPEAAGID 219
>UniRef50_P59076 Cluster: Methionyl-tRNA synthetase; n=19;
Bacteria|Rep: Methionyl-tRNA synthetase -
Bifidobacterium longum
Length = 621
Score = 32.7 bits (71), Expect = 10.0
Identities = 16/42 (38%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
Frame = -1
Query: 146 NPQPWSEEATSAQRPEPKPAPVTPKF-TAKVEPKAANLDSSM 24
N PW EA PKPAP+ K T VE + A D ++
Sbjct: 559 NVHPWKSEAIEVGAMVPKPAPIFAKIPTEAVEEELARFDEAL 600
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 705,193,264
Number of Sequences: 1657284
Number of extensions: 14224819
Number of successful extensions: 49669
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 44745
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 49107
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 62146450145
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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