Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20418
         (752 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    24   1.1  
AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.        23   3.5  
EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    22   4.6  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    22   4.6  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   6.0  
AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    22   6.0  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +2

Query: 401 LLCTQHLYYWCIIITTLHY 457
           LLCT + YY  II+  ++Y
Sbjct: 97  LLCTYYFYYAFIILLCVYY 115


>AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.
          Length = 556

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 17/57 (29%), Positives = 25/57 (43%), Gaps = 1/57 (1%)
 Frame = -1

Query: 242 LLKNVGKGEK-RVIIILALTIIANGRDVRHKIGNPQPWSEEATSAQRPEPKPAPVTP 75
           LL++V + +K R      L I + G  V  +   P P+  +   A  P   P  VTP
Sbjct: 364 LLRHVEESDKQRTHQPFLLNIPSEGIKVEPRDKAPSPYGGQMFEAPIPNVSPHYVTP 420


>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 12/41 (29%), Positives = 23/41 (56%)
 Frame = +3

Query: 609 VTM*SESLGYKLFSEIQTSQTL*LTGYEIKIVVL*QDKVRY 731
           + M ++++ +       TS TL LT YE+ +    QD++R+
Sbjct: 286 IKMAAQAIAFFSAGNDTTSITLALTCYELSLNKTIQDRLRH 326


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 11/39 (28%), Positives = 24/39 (61%)
 Frame = +2

Query: 632 WL*IIFRNSDQSDVVINWI*D*NCSFVAR*STVFLLSSL 748
           W+  +F+N + S++V  ++     +FVA  +T+ +L+ L
Sbjct: 450 WIVALFKNENLSEMVKQFLFTQKFTFVAGLATLSVLNLL 488



 Score = 21.4 bits (43), Expect = 8.0
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = +3

Query: 300 NIIFNCVANIAKLYV 344
           N+IF+ +AN+A  +V
Sbjct: 746 NLIFSLIANVAMYFV 760


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = -2

Query: 391 NDAGDRYRLLVSDGKYTYSFAM 326
           + AGD+Y  LV DG     F +
Sbjct: 717 DSAGDKYSRLVGDGSARRRFVV 738


>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 11/29 (37%), Positives = 14/29 (48%), Gaps = 1/29 (3%)
 Frame = +3

Query: 99  FWALS*CCFL*PWLWIT-YLMTNISTICY 182
           FWA S  C +   +WIT      +S  CY
Sbjct: 329 FWAFSNACEVMAIVWITSETCEEVSKKCY 357


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 176,935
Number of Sequences: 336
Number of extensions: 3885
Number of successful extensions: 13
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20131186
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)