Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20418
(752 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M63488-1|AAA36584.1| 616|Homo sapiens replication protein A, 70... 58 4e-08
BC018126-1|AAH18126.1| 616|Homo sapiens replication protein A1,... 58 4e-08
AY599563-1|AAS94324.1| 616|Homo sapiens replication protein A1,... 58 4e-08
AB209732-1|BAD92969.1| 630|Homo sapiens replication protein A1,... 58 4e-08
AK128451-1|BAC87447.1| 368|Homo sapiens protein ( Homo sapiens ... 34 0.48
AB209292-1|BAD92529.1| 610|Homo sapiens N-methyl-D-aspartate re... 31 4.5
X95735-1|CAA65050.1| 572|Homo sapiens zyxin protein. 30 7.8
X94991-1|CAA64447.1| 572|Homo sapiens zyxin protein. 30 7.8
U15158-1|AAA78902.1| 493|Homo sapiens ESP-2 protein. 30 7.8
CR457431-1|CAG33712.1| 572|Homo sapiens ZYX protein. 30 7.8
BC017183-1|AAH17183.2| 466|Homo sapiens ZYX protein protein. 30 7.8
BC010031-1|AAH10031.1| 572|Homo sapiens zyxin protein. 30 7.8
BC009360-1|AAH09360.1| 572|Homo sapiens zyxin protein. 30 7.8
BC008743-1|AAH08743.1| 572|Homo sapiens zyxin protein. 30 7.8
BC002323-1|AAH02323.2| 581|Homo sapiens ZYX protein protein. 30 7.8
AL096857-1|CAB51071.1| 2701|Homo sapiens hypothetical protein pr... 30 7.8
AF488829-1|AAO49478.1| 2701|Homo sapiens HBxAg transactivated pr... 30 7.8
AC092214-1|AAS07459.1| 572|Homo sapiens unknown protein. 30 7.8
>M63488-1|AAA36584.1| 616|Homo sapiens replication protein A,
70-kDa subunit protein.
Length = 616
Score = 57.6 bits (133), Expect = 4e-08
Identities = 32/79 (40%), Positives = 49/79 (62%), Gaps = 1/79 (1%)
Frame = -2
Query: 481 LSEGALETIMKGGNYDA-PIIQMLGTKKIQGNDAGDRYRLLVSDGKYTYSFAMLATQLNI 305
LSEGA+ IM+ G+ + PI+Q++ + I ++ RYRLL+SDG T S MLATQLN
Sbjct: 5 LSEGAIAAIMQKGDTNIKPILQVINIRPITTGNSPPRYRLLMSDGLNTLSSFMLATQLNP 64
Query: 304 MLLSGELTDYSVIQVDHLL 248
++ +L+ V Q+ +
Sbjct: 65 LVEEEQLSSNCVCQIHRFI 83
Score = 39.5 bits (88), Expect = 0.013
Identities = 20/62 (32%), Positives = 35/62 (56%)
Frame = -1
Query: 233 NVGKGEKRVIIILALTIIANGRDVRHKIGNPQPWSEEATSAQRPEPKPAPVTPKFTAKVE 54
N K +RV+I++ L ++ + V KIGNP P++E Q P PA +P +++ +
Sbjct: 85 NTLKDGRRVVILMELEVLKSAEAVGVKIGNPVPYNEGLGQPQVAPPAPA-ASPAASSRPQ 143
Query: 53 PK 48
P+
Sbjct: 144 PQ 145
>BC018126-1|AAH18126.1| 616|Homo sapiens replication protein A1,
70kDa protein.
Length = 616
Score = 57.6 bits (133), Expect = 4e-08
Identities = 32/79 (40%), Positives = 49/79 (62%), Gaps = 1/79 (1%)
Frame = -2
Query: 481 LSEGALETIMKGGNYDA-PIIQMLGTKKIQGNDAGDRYRLLVSDGKYTYSFAMLATQLNI 305
LSEGA+ IM+ G+ + PI+Q++ + I ++ RYRLL+SDG T S MLATQLN
Sbjct: 5 LSEGAIAAIMQKGDTNIKPILQVINIRPITTGNSPPRYRLLMSDGLNTLSSFMLATQLNP 64
Query: 304 MLLSGELTDYSVIQVDHLL 248
++ +L+ V Q+ +
Sbjct: 65 LVEEEQLSSNCVCQIHRFI 83
Score = 39.5 bits (88), Expect = 0.013
Identities = 20/62 (32%), Positives = 35/62 (56%)
Frame = -1
Query: 233 NVGKGEKRVIIILALTIIANGRDVRHKIGNPQPWSEEATSAQRPEPKPAPVTPKFTAKVE 54
N K +RV+I++ L ++ + V KIGNP P++E Q P PA +P +++ +
Sbjct: 85 NTLKDGRRVVILMELEVLKSAEAVGVKIGNPVPYNEGLGQPQVAPPAPA-ASPAASSRPQ 143
Query: 53 PK 48
P+
Sbjct: 144 PQ 145
>AY599563-1|AAS94324.1| 616|Homo sapiens replication protein A1,
70kDa protein.
Length = 616
Score = 57.6 bits (133), Expect = 4e-08
Identities = 32/79 (40%), Positives = 49/79 (62%), Gaps = 1/79 (1%)
Frame = -2
Query: 481 LSEGALETIMKGGNYDA-PIIQMLGTKKIQGNDAGDRYRLLVSDGKYTYSFAMLATQLNI 305
LSEGA+ IM+ G+ + PI+Q++ + I ++ RYRLL+SDG T S MLATQLN
Sbjct: 5 LSEGAIAAIMQKGDTNIKPILQVINIRPITTGNSPPRYRLLMSDGLNTLSSFMLATQLNP 64
Query: 304 MLLSGELTDYSVIQVDHLL 248
++ +L+ V Q+ +
Sbjct: 65 LVEEEQLSSNCVCQIHRFI 83
Score = 39.5 bits (88), Expect = 0.013
Identities = 20/62 (32%), Positives = 35/62 (56%)
Frame = -1
Query: 233 NVGKGEKRVIIILALTIIANGRDVRHKIGNPQPWSEEATSAQRPEPKPAPVTPKFTAKVE 54
N K +RV+I++ L ++ + V KIGNP P++E Q P PA +P +++ +
Sbjct: 85 NTLKDGRRVVILMELEVLKSAEAVGVKIGNPVPYNEGLGQPQVAPPAPA-ASPAASSRPQ 143
Query: 53 PK 48
P+
Sbjct: 144 PQ 145
>AB209732-1|BAD92969.1| 630|Homo sapiens replication protein A1,
70kDa variant protein.
Length = 630
Score = 57.6 bits (133), Expect = 4e-08
Identities = 32/79 (40%), Positives = 49/79 (62%), Gaps = 1/79 (1%)
Frame = -2
Query: 481 LSEGALETIMKGGNYDA-PIIQMLGTKKIQGNDAGDRYRLLVSDGKYTYSFAMLATQLNI 305
LSEGA+ IM+ G+ + PI+Q++ + I ++ RYRLL+SDG T S MLATQLN
Sbjct: 19 LSEGAIAAIMQKGDTNIKPILQVINIRPITTGNSPPRYRLLMSDGLNTLSSFMLATQLNP 78
Query: 304 MLLSGELTDYSVIQVDHLL 248
++ +L+ V Q+ +
Sbjct: 79 LVEEEQLSSNCVCQIHRFI 97
Score = 39.5 bits (88), Expect = 0.013
Identities = 20/62 (32%), Positives = 35/62 (56%)
Frame = -1
Query: 233 NVGKGEKRVIIILALTIIANGRDVRHKIGNPQPWSEEATSAQRPEPKPAPVTPKFTAKVE 54
N K +RV+I++ L ++ + V KIGNP P++E Q P PA +P +++ +
Sbjct: 99 NTLKDGRRVVILMELEVLKSAEAVGVKIGNPVPYNEGLGQPQVAPPAPA-ASPAASSRPQ 157
Query: 53 PK 48
P+
Sbjct: 158 PQ 159
>AK128451-1|BAC87447.1| 368|Homo sapiens protein ( Homo sapiens
cDNA FLJ46594 fis, clone THYMU3045692. ).
Length = 368
Score = 34.3 bits (75), Expect = 0.48
Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = +1
Query: 352 HLIPIICIYPQ-HHSLESSLYPAFVLLVHHNYHPSLWSLRHP 474
HL CI+P H S+ S+YP L +H HPS+ HP
Sbjct: 291 HLFIHPCIHPSIHPSIHVSIYPTMHLSIHPCIHPSIPPCIHP 332
Score = 32.7 bits (71), Expect = 1.5
Identities = 15/35 (42%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Frame = +1
Query: 373 IYPQ-HHSLESSLYPAFVLLVHHNYHPSLWSLRHP 474
IYP H S+ SS+YP +H + HPS+++ HP
Sbjct: 178 IYPSIHASIHSSMYPC----IHPSIHPSIYARMHP 208
>AB209292-1|BAD92529.1| 610|Homo sapiens N-methyl-D-aspartate
receptor subunit 2D precursor variant protein.
Length = 610
Score = 31.1 bits (67), Expect = 4.5
Identities = 14/30 (46%), Positives = 16/30 (53%)
Frame = -1
Query: 143 PQPWSEEATSAQRPEPKPAPVTPKFTAKVE 54
PQP A A RP P PAP P+ A V+
Sbjct: 186 PQPLPSPAYPAPRPAPGPAPFVPRERASVD 215
>X95735-1|CAA65050.1| 572|Homo sapiens zyxin protein.
Length = 572
Score = 30.3 bits (65), Expect = 7.8
Identities = 20/51 (39%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
Frame = -1
Query: 152 IGNPQPWSEEATSAQRPEPKPAPVTPKFT---AKVEPKAANLDSSMLSVKM 9
+ N QP A+S P PK +PVTPKFT +K P A S + K+
Sbjct: 247 LANTQPRGPPASSPA-PAPKFSPVTPKFTPVASKFSPGAPGGSGSQPNQKL 296
>X94991-1|CAA64447.1| 572|Homo sapiens zyxin protein.
Length = 572
Score = 30.3 bits (65), Expect = 7.8
Identities = 20/51 (39%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
Frame = -1
Query: 152 IGNPQPWSEEATSAQRPEPKPAPVTPKFT---AKVEPKAANLDSSMLSVKM 9
+ N QP A+S P PK +PVTPKFT +K P A S + K+
Sbjct: 247 LANTQPRGPPASSPA-PAPKFSPVTPKFTPVASKFSPGAPGGSGSQPNQKL 296
>U15158-1|AAA78902.1| 493|Homo sapiens ESP-2 protein.
Length = 493
Score = 30.3 bits (65), Expect = 7.8
Identities = 20/51 (39%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
Frame = -1
Query: 152 IGNPQPWSEEATSAQRPEPKPAPVTPKFT---AKVEPKAANLDSSMLSVKM 9
+ N QP A+S P PK +PVTPKFT +K P A S + K+
Sbjct: 168 LANTQPRGPPASSPA-PAPKFSPVTPKFTPVASKFSPGAPGGSGSQPNQKL 217
>CR457431-1|CAG33712.1| 572|Homo sapiens ZYX protein.
Length = 572
Score = 30.3 bits (65), Expect = 7.8
Identities = 20/51 (39%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
Frame = -1
Query: 152 IGNPQPWSEEATSAQRPEPKPAPVTPKFT---AKVEPKAANLDSSMLSVKM 9
+ N QP A+S P PK +PVTPKFT +K P A S + K+
Sbjct: 247 LANTQPRGPPASSPA-PAPKFSPVTPKFTPVASKFSPGAPGGSGSQPNQKL 296
>BC017183-1|AAH17183.2| 466|Homo sapiens ZYX protein protein.
Length = 466
Score = 30.3 bits (65), Expect = 7.8
Identities = 20/51 (39%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
Frame = -1
Query: 152 IGNPQPWSEEATSAQRPEPKPAPVTPKFT---AKVEPKAANLDSSMLSVKM 9
+ N QP A+S P PK +PVTPKFT +K P A S + K+
Sbjct: 141 LANTQPRGPPASSPA-PAPKFSPVTPKFTPVASKFSPGAPGGSGSQPNQKL 190
>BC010031-1|AAH10031.1| 572|Homo sapiens zyxin protein.
Length = 572
Score = 30.3 bits (65), Expect = 7.8
Identities = 20/51 (39%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
Frame = -1
Query: 152 IGNPQPWSEEATSAQRPEPKPAPVTPKFT---AKVEPKAANLDSSMLSVKM 9
+ N QP A+S P PK +PVTPKFT +K P A S + K+
Sbjct: 247 LANTQPRGPPASSPA-PAPKFSPVTPKFTPVASKFSPGAPGGSGSQPNQKL 296
>BC009360-1|AAH09360.1| 572|Homo sapiens zyxin protein.
Length = 572
Score = 30.3 bits (65), Expect = 7.8
Identities = 20/51 (39%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
Frame = -1
Query: 152 IGNPQPWSEEATSAQRPEPKPAPVTPKFT---AKVEPKAANLDSSMLSVKM 9
+ N QP A+S P PK +PVTPKFT +K P A S + K+
Sbjct: 247 LANTQPRGPPASSPA-PAPKFSPVTPKFTPVASKFSPGAPGGSGSQPNQKL 296
>BC008743-1|AAH08743.1| 572|Homo sapiens zyxin protein.
Length = 572
Score = 30.3 bits (65), Expect = 7.8
Identities = 20/51 (39%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
Frame = -1
Query: 152 IGNPQPWSEEATSAQRPEPKPAPVTPKFT---AKVEPKAANLDSSMLSVKM 9
+ N QP A+S P PK +PVTPKFT +K P A S + K+
Sbjct: 247 LANTQPRGPPASSPA-PAPKFSPVTPKFTPVASKFSPGAPGGSGSQPNQKL 296
>BC002323-1|AAH02323.2| 581|Homo sapiens ZYX protein protein.
Length = 581
Score = 30.3 bits (65), Expect = 7.8
Identities = 20/51 (39%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
Frame = -1
Query: 152 IGNPQPWSEEATSAQRPEPKPAPVTPKFT---AKVEPKAANLDSSMLSVKM 9
+ N QP A+S P PK +PVTPKFT +K P A S + K+
Sbjct: 256 LANTQPRGPPASSPA-PAPKFSPVTPKFTPVASKFSPGAPGGSGSQPNQKL 305
>AL096857-1|CAB51071.1| 2701|Homo sapiens hypothetical protein
protein.
Length = 2701
Score = 30.3 bits (65), Expect = 7.8
Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 4/41 (9%)
Frame = -1
Query: 182 IANGRDVRHKIGNP----QPWSEEATSAQRPEPKPAPVTPK 72
+ NG H+ G P Q S+++T +R +PKP P PK
Sbjct: 1600 LINGSSAHHQEGVPNGTGQKNSKDSTGKKREDPKPGPKKPK 1640
>AF488829-1|AAO49478.1| 2701|Homo sapiens HBxAg transactivated protein
2 protein.
Length = 2701
Score = 30.3 bits (65), Expect = 7.8
Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 4/41 (9%)
Frame = -1
Query: 182 IANGRDVRHKIGNP----QPWSEEATSAQRPEPKPAPVTPK 72
+ NG H+ G P Q S+++T +R +PKP P PK
Sbjct: 1600 LINGSSAHHQEGVPNGTGQKNSKDSTGKKREDPKPGPKKPK 1640
>AC092214-1|AAS07459.1| 572|Homo sapiens unknown protein.
Length = 572
Score = 30.3 bits (65), Expect = 7.8
Identities = 20/51 (39%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
Frame = -1
Query: 152 IGNPQPWSEEATSAQRPEPKPAPVTPKFT---AKVEPKAANLDSSMLSVKM 9
+ N QP A+S P PK +PVTPKFT +K P A S + K+
Sbjct: 247 LANTQPRGPPASSPA-PAPKFSPVTPKFTPVASKFSPGAPGGSGSQPNQKL 296
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 102,009,826
Number of Sequences: 237096
Number of extensions: 2089852
Number of successful extensions: 10053
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 9508
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9996
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9071127468
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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