Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20418
         (752 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81134-9|CAB03452.1|  559|Caenorhabditis elegans Hypothetical pr...    31   0.88 
AL031635-12|CAA21045.1|  559|Caenorhabditis elegans Hypothetical...    31   0.88 
AJ270999-1|CAB71298.1|  559|Caenorhabditis elegans prolyl 4-hydr...    31   0.88 
Z71265-3|CAA95835.2|  403|Caenorhabditis elegans Hypothetical pr...    30   2.0  
Z82083-3|CAB04971.1|  756|Caenorhabditis elegans Hypothetical pr...    29   2.7  
AC024785-6|AAF60605.2|  467|Caenorhabditis elegans C-type lectin...    29   3.5  
AF026205-6|AAM69068.1|  908|Caenorhabditis elegans Hypothetical ...    28   6.2  
AF026205-5|AAB71258.1|  880|Caenorhabditis elegans Hypothetical ...    28   6.2  
AF026205-4|AAD47129.1|  885|Caenorhabditis elegans Hypothetical ...    28   6.2  
AF026205-3|AAB71257.1|  930|Caenorhabditis elegans Hypothetical ...    28   6.2  
AC006651-1|AAF39870.4| 1138|Caenorhabditis elegans Hypothetical ...    28   6.2  
AF016665-6|AAL02468.1|  655|Caenorhabditis elegans Hypothetical ...    28   8.2  

>Z81134-9|CAB03452.1|  559|Caenorhabditis elegans Hypothetical
           protein Y47D3B.10 protein.
          Length = 559

 Score = 31.1 bits (67), Expect = 0.88
 Identities = 16/55 (29%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
 Frame = +1

Query: 160 RTSRPFAIMVKARMIITRFSPFPTFFSNVVTNDQLVSQSNL--*VLQRAT*YSTV 318
           +  RPF +    ++ I RF+P    F +V+++D++ +   L    L RAT + +V
Sbjct: 308 KRDRPFLVYAPIKVEIKRFNPLAVLFKDVISDDEVAAIQELAKPKLARATVHDSV 362


>AL031635-12|CAA21045.1|  559|Caenorhabditis elegans Hypothetical
           protein Y47D3B.10 protein.
          Length = 559

 Score = 31.1 bits (67), Expect = 0.88
 Identities = 16/55 (29%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
 Frame = +1

Query: 160 RTSRPFAIMVKARMIITRFSPFPTFFSNVVTNDQLVSQSNL--*VLQRAT*YSTV 318
           +  RPF +    ++ I RF+P    F +V+++D++ +   L    L RAT + +V
Sbjct: 308 KRDRPFLVYAPIKVEIKRFNPLAVLFKDVISDDEVAAIQELAKPKLARATVHDSV 362


>AJ270999-1|CAB71298.1|  559|Caenorhabditis elegans prolyl
           4-hydroxylase alpha subunit1 protein.
          Length = 559

 Score = 31.1 bits (67), Expect = 0.88
 Identities = 16/55 (29%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
 Frame = +1

Query: 160 RTSRPFAIMVKARMIITRFSPFPTFFSNVVTNDQLVSQSNL--*VLQRAT*YSTV 318
           +  RPF +    ++ I RF+P    F +V+++D++ +   L    L RAT + +V
Sbjct: 308 KRDRPFLVYAPIKVEIKRFNPLAVLFKDVISDDEVAAIQELAKPKLARATVHDSV 362


>Z71265-3|CAA95835.2|  403|Caenorhabditis elegans Hypothetical
           protein M05B5.3 protein.
          Length = 403

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 20/41 (48%), Positives = 25/41 (60%), Gaps = 3/41 (7%)
 Frame = -1

Query: 116 SAQRPEPK-PAPVTPKFTAKVEPKAANLD--SSMLSVKMTN 3
           S+Q+P+ K PAP    F   VEPKA + D  +S  S KMTN
Sbjct: 324 SSQQPKSKAPAPRPSIFPYFVEPKAPSSDVSTSKASSKMTN 364


>Z82083-3|CAB04971.1|  756|Caenorhabditis elegans Hypothetical
           protein ZK1010.5 protein.
          Length = 756

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 17/37 (45%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
 Frame = -1

Query: 146 NPQPWSEEATSAQ-RPEPKPAPVTPKFTAKVEPKAAN 39
           NPQP    + S +  PEPKP PVTP     V+P   N
Sbjct: 636 NPQPPPPPSPSPEPEPEPKP-PVTPPKNETVDPVHEN 671


>AC024785-6|AAF60605.2|  467|Caenorhabditis elegans C-type lectin
           protein 74 protein.
          Length = 467

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 15/41 (36%), Positives = 20/41 (48%)
 Frame = +1

Query: 361 PIICIYPQHHSLESSLYPAFVLLVHHNYHPSLWSLRHPPTN 483
           PI  + P+     S + P   +LVH +Y  SL    H PTN
Sbjct: 347 PIYAVTPRVSGEGSQILPPMTVLVHASYLLSLSIQSHVPTN 387


>AF026205-6|AAM69068.1|  908|Caenorhabditis elegans Hypothetical
           protein T23E7.2e protein.
          Length = 908

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = -1

Query: 143 PQPWSEEATSAQRPEPKPAPVTPKFTAKVEPKA 45
           P+P +EE      PEP+P PV     A+ EP+A
Sbjct: 497 PEPVAEEPEPVAEPEPEPEPV-----AEAEPEA 524


>AF026205-5|AAB71258.1|  880|Caenorhabditis elegans Hypothetical
           protein T23E7.2b protein.
          Length = 880

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = -1

Query: 143 PQPWSEEATSAQRPEPKPAPVTPKFTAKVEPKA 45
           P+P +EE      PEP+P PV     A+ EP+A
Sbjct: 447 PEPVAEEPEPVAEPEPEPEPV-----AEAEPEA 474


>AF026205-4|AAD47129.1|  885|Caenorhabditis elegans Hypothetical
           protein T23E7.2c protein.
          Length = 885

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = -1

Query: 143 PQPWSEEATSAQRPEPKPAPVTPKFTAKVEPKA 45
           P+P +EE      PEP+P PV     A+ EP+A
Sbjct: 497 PEPVAEEPEPVAEPEPEPEPV-----AEAEPEA 524


>AF026205-3|AAB71257.1|  930|Caenorhabditis elegans Hypothetical
           protein T23E7.2a protein.
          Length = 930

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = -1

Query: 143 PQPWSEEATSAQRPEPKPAPVTPKFTAKVEPKA 45
           P+P +EE      PEP+P PV     A+ EP+A
Sbjct: 497 PEPVAEEPEPVAEPEPEPEPV-----AEAEPEA 524


>AC006651-1|AAF39870.4| 1138|Caenorhabditis elegans Hypothetical
           protein H06I04.5 protein.
          Length = 1138

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 23/57 (40%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
 Frame = -1

Query: 209 VIIILALTIIANGRDVRHKIGNPQPWSEEATSAQ--RPEPKPAP-VTPKFTAKVEPK 48
           VI++L +  IA    +R K    +P S E   A+   PEPKPAP   PK   K +PK
Sbjct: 647 VILLLVIVGIAVFLIMRKK---SKPSSSEVPPAEPSAPEPKPAPKPDPKPDPKPDPK 700


>AF016665-6|AAL02468.1|  655|Caenorhabditis elegans Hypothetical
           protein C49D10.10 protein.
          Length = 655

 Score = 27.9 bits (59), Expect = 8.2
 Identities = 13/46 (28%), Positives = 26/46 (56%)
 Frame = -1

Query: 209 VIIILALTIIANGRDVRHKIGNPQPWSEEATSAQRPEPKPAPVTPK 72
           +I+IL L ++     +  ++   +  S  +TS+  P+PKP  +TP+
Sbjct: 23  IIVILPLVLLLEAGKIGGEVS--ENCSNHSTSSASPKPKPMCLTPE 66


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,608,733
Number of Sequences: 27780
Number of extensions: 352468
Number of successful extensions: 1156
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1048
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1153
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1788025660
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)