Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20416
         (377 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11 pro...    24   0.44 
AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    23   0.77 
U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II p...    23   1.0  
AJ888865-1|CAI61930.1|  108|Tribolium castaneum modulator of act...    23   1.3  
AJ622939-1|CAF22091.1|  108|Tribolium castaneum ETS activity mod...    23   1.3  
X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Triboliu...    22   1.8  
U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I pr...    22   1.8  
AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    21   4.1  
AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII pr...    21   4.1  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   5.4  
AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory recept...    20   7.2  
EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    20   9.5  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      20   9.5  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      20   9.5  

>DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11
           protein.
          Length = 366

 Score = 24.2 bits (50), Expect = 0.44
 Identities = 11/28 (39%), Positives = 14/28 (50%)
 Frame = +2

Query: 248 SSSETGFVPSYGHKHYNTTSYNHSRSLP 331
           +S  T  VP YGH  Y  ++ NH    P
Sbjct: 239 ASKVTLSVPFYGHSWYLQSTSNHDVGAP 266


>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 23.4 bits (48), Expect = 0.77
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +3

Query: 108 KPTVTEQPPPYSAAVPPGLQPH 173
           K T  + PPP ++    GL+PH
Sbjct: 147 KVTGNDAPPPITSFETSGLRPH 168


>U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II
           protein.
          Length = 490

 Score = 23.0 bits (47), Expect = 1.0
 Identities = 11/30 (36%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
 Frame = -1

Query: 350 NANSTCGASSDCDYSW-WYYNVCG-RSLVQ 267
           N + TCG    C++ W   +N+ G R+ VQ
Sbjct: 368 NDDGTCGNGYGCEHRWRQIFNMVGFRNAVQ 397


>AJ888865-1|CAI61930.1|  108|Tribolium castaneum modulator of
           activity of ets genes protein.
          Length = 108

 Score = 22.6 bits (46), Expect = 1.3
 Identities = 10/37 (27%), Positives = 20/37 (54%)
 Frame = +1

Query: 121 PSNPRRILRQSLQGFNRIHTHRHLIPQVHLFRHHLRG 231
           P +PR+  R+ +  +  + T +H +P+V   R  + G
Sbjct: 33  PKDPRQWTREHVAQWINLVTQQHGLPEVPSSRFLMNG 69


>AJ622939-1|CAF22091.1|  108|Tribolium castaneum ETS activity
           modulator protein.
          Length = 108

 Score = 22.6 bits (46), Expect = 1.3
 Identities = 10/37 (27%), Positives = 20/37 (54%)
 Frame = +1

Query: 121 PSNPRRILRQSLQGFNRIHTHRHLIPQVHLFRHHLRG 231
           P +PR+  R+ +  +  + T +H +P+V   R  + G
Sbjct: 33  PKDPRQWTREHVAQWINLVTQQHGLPEVPSSRFLMNG 69


>X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Tribolium
           castaneum mRNAfor alhpa amylase 3'region. ).
          Length = 489

 Score = 22.2 bits (45), Expect = 1.8
 Identities = 11/30 (36%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
 Frame = -1

Query: 350 NANSTCGASSDCDYSW-WYYNVCG-RSLVQ 267
           N + TCG    C++ W   +N+ G R+ VQ
Sbjct: 367 NDDGTCGNGYVCEHRWRQIFNMVGFRNAVQ 396


>U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I
           protein.
          Length = 490

 Score = 22.2 bits (45), Expect = 1.8
 Identities = 11/30 (36%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
 Frame = -1

Query: 350 NANSTCGASSDCDYSW-WYYNVCG-RSLVQ 267
           N + TCG    C++ W   +N+ G R+ VQ
Sbjct: 368 NDDGTCGNGYVCEHRWRQIFNMVGFRNAVQ 397


>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 21.0 bits (42), Expect = 4.1
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +3

Query: 120 TEQPPPYSAAVPPGLQP 170
           TE P  YS++ P G  P
Sbjct: 29  TEAPAAYSSSSPSGSSP 45


>AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII
           protein.
          Length = 209

 Score = 21.0 bits (42), Expect = 4.1
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +3

Query: 120 TEQPPPYSAAVPPGLQP 170
           TE P  YS++ P G  P
Sbjct: 29  TEAPAAYSSSSPSGSSP 45


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 20.6 bits (41), Expect = 5.4
 Identities = 8/21 (38%), Positives = 10/21 (47%)
 Frame = +2

Query: 269 VPSYGHKHYNTTSYNHSRSLP 331
           VP YG     T   NH + +P
Sbjct: 867 VPFYGQSFTLTKGNNHDQGVP 887


>AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory receptor
           candidate 17 protein.
          Length = 372

 Score = 20.2 bits (40), Expect = 7.2
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = -1

Query: 302 WYYNVCGRSLVQSLFL 255
           WY+ +CG S    LF+
Sbjct: 338 WYFQICG-SAFSYLFI 352


>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 19.8 bits (39), Expect = 9.5
 Identities = 6/15 (40%), Positives = 7/15 (46%)
 Frame = -1

Query: 347 ANSTCGASSDCDYSW 303
           A    G +  CDY W
Sbjct: 65  AGKNRGVTEGCDYPW 79


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 19.8 bits (39), Expect = 9.5
 Identities = 6/11 (54%), Positives = 7/11 (63%)
 Frame = +3

Query: 126 QPPPYSAAVPP 158
           QPPP    +PP
Sbjct: 136 QPPPAHMGIPP 146


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 19.8 bits (39), Expect = 9.5
 Identities = 6/11 (54%), Positives = 7/11 (63%)
 Frame = +3

Query: 126 QPPPYSAAVPP 158
           QPPP    +PP
Sbjct: 28  QPPPAHMGIPP 38


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,559
Number of Sequences: 336
Number of extensions: 2122
Number of successful extensions: 14
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  7803226
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)