Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20411
(581 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr 1||... 149 2e-37
SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr 2||... 113 1e-26
SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr 1|... 111 5e-26
SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr 1||... 95 9e-21
SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr... 90 2e-19
SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr 2||... 89 4e-19
SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr 1|||... 85 9e-18
SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr... 78 1e-15
SPAC16.01 |rho2||Rho family GTPase Rho2|Schizosaccharomyces pomb... 58 9e-10
SPAC23C4.08 |rho3||Rho family GTPase Rho3|Schizosaccharomyces po... 58 9e-10
SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|ch... 57 2e-09
SPAC1565.06c |spg1|sid3|GTPase Spg1|Schizosaccharomyces pombe|ch... 56 5e-09
SPAC17H9.09c |ras1|ste5|GTPase Ras1|Schizosaccharomyces pombe|ch... 53 4e-08
SPAC20H4.11c |rho5||Rho family GTPase Rho5|Schizosaccharomyces p... 50 2e-07
SPAC1F7.04 |rho1||Rho family GTPase Rho1|Schizosaccharomyces pom... 50 3e-07
SPAC16A10.04 |rho4||Rho family GTPase Rho4|Schizosaccharomyces p... 44 1e-05
SPBC428.16c |rhb1||Rheb GTPase Rhb1|Schizosaccharomyces pombe|ch... 43 4e-05
SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces p... 42 9e-05
SPAC22F3.05c |alp41||ADP-ribosylation factor Alp41|Schizosacchar... 41 2e-04
SPBC1539.08 |||ADP-ribosylation factor, Arf family|Schizosacchar... 38 0.001
SPBC4F6.18c |arf1||ADP-ribosylation factor Arf1|Schizosaccharomy... 33 0.030
SPCC320.04c |||GTPase Gem1 |Schizosaccharomyces pombe|chr 3|||Ma... 32 0.053
SPBC1198.05 |||guanylate kinase |Schizosaccharomyces pombe|chr 2... 29 0.65
SPAC23H3.13c |gpa2|git8|heterotrimeric G protein alpha-2 subunit... 28 0.87
SPBC354.01 |gtp1|SPBC649.06|GTP binding protein Gtp1|Schizosacch... 27 1.5
SPAC4G9.19 |||DNAJ domain protein DNAJB family|Schizosaccharomyc... 27 1.5
SPAC4F10.11 |spn1||septin Spn1|Schizosaccharomyces pombe|chr 1||... 26 4.6
SPAC24C9.15c |spn5|mde9, meu28|septin Spn5|Schizosaccharomyces p... 26 4.6
SPCC550.04c |gpi2||pig-C|Schizosaccharomyces pombe|chr 3|||Manual 25 8.1
>SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr
1|||Manual
Length = 214
Score = 149 bits (362), Expect = 2e-37
Identities = 70/81 (86%), Positives = 76/81 (93%)
Frame = +2
Query: 251 KKDEYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQ 430
++DEYDYLFK VLIGDSGVGKS+LL RFTRNEFN+ESKSTIGVEFATR+I +D K IKAQ
Sbjct: 3 QEDEYDYLFKTVLIGDSGVGKSNLLMRFTRNEFNIESKSTIGVEFATRNIVLDNKKIKAQ 62
Query: 431 IWDTAGQERYRAITSAYYRGA 493
IWDTAGQERYRAITSAYYRGA
Sbjct: 63 IWDTAGQERYRAITSAYYRGA 83
Score = 34.3 bits (75), Expect = 0.013
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = +3
Query: 510 YDIAKHLSYENVERWLRELRD 572
YDI K S++NV RWL+ELR+
Sbjct: 90 YDITKQSSFDNVGRWLKELRE 110
>SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 203
Score = 113 bits (273), Expect = 1e-26
Identities = 52/78 (66%), Positives = 63/78 (80%)
Frame = +2
Query: 260 EYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWD 439
EYDYLFK++LIGDSGVGKS LL RF + + STIGV+F R+ E++GKT+K QIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTFELEGKTVKLQIWD 63
Query: 440 TAGQERYRAITSAYYRGA 493
TAGQER+R ITS+YYRGA
Sbjct: 64 TAGQERFRTITSSYYRGA 81
Score = 25.4 bits (53), Expect = 6.1
Identities = 8/19 (42%), Positives = 14/19 (73%)
Frame = +3
Query: 510 YDIAKHLSYENVERWLREL 566
YD+ S+ NV++WL+E+
Sbjct: 88 YDVTDQDSFNNVKQWLQEI 106
>SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 200
Score = 111 bits (268), Expect = 5e-26
Identities = 51/77 (66%), Positives = 62/77 (80%)
Frame = +2
Query: 263 YDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDT 442
YDYL K++LIGDSGVGKS LL RF+ + F +TIG++F R+IE+DGK IK QIWDT
Sbjct: 6 YDYLIKLLLIGDSGVGKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRIKLQIWDT 65
Query: 443 AGQERYRAITSAYYRGA 493
AGQER+R IT+AYYRGA
Sbjct: 66 AGQERFRTITTAYYRGA 82
>SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr
1|||Manual
Length = 234
Score = 94.7 bits (225), Expect = 9e-21
Identities = 44/84 (52%), Positives = 59/84 (70%), Gaps = 4/84 (4%)
Frame = +2
Query: 254 KDEYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEV----DGKTI 421
K+ YDYL K+VL G SG GKS LL RF +N+++ + T+G++FA+R I V K I
Sbjct: 3 KESYDYLVKIVLAGPSGTGKSCLLQRFVKNQWDDQVSHTVGIDFASRIISVGMGNQQKRI 62
Query: 422 KAQIWDTAGQERYRAITSAYYRGA 493
K QIWDTAGQE++R++ YYRGA
Sbjct: 63 KLQIWDTAGQEKFRSVARNYYRGA 86
>SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr
1|||Manual
Length = 208
Score = 90.2 bits (214), Expect = 2e-19
Identities = 37/72 (51%), Positives = 56/72 (77%)
Frame = +2
Query: 278 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQER 457
KVV++GDSGVGK+ L+++F +F+ E K+TIG +F T+ + VD K + Q+WDTAGQER
Sbjct: 10 KVVILGDSGVGKTCLMNQFVNQKFSREYKATIGADFLTKDVVVDDKLVTLQLWDTAGQER 69
Query: 458 YRAITSAYYRGA 493
++++ A+YRGA
Sbjct: 70 FQSLGMAFYRGA 81
>SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr
2|||Manual
Length = 205
Score = 89.0 bits (211), Expect = 4e-19
Identities = 34/75 (45%), Positives = 59/75 (78%)
Frame = +2
Query: 269 YLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAG 448
+L KV+++G+SGVGK+S+++++ +F+ + K+TIG +F T+ + VD K + Q+WDTAG
Sbjct: 7 HLLKVIILGESGVGKTSIMNQYVNRKFSKDYKATIGADFLTKEVLVDDKVVTLQLWDTAG 66
Query: 449 QERYRAITSAYYRGA 493
QER++++ A+YRGA
Sbjct: 67 QERFQSLGVAFYRGA 81
>SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr
1|||Manual
Length = 211
Score = 84.6 bits (200), Expect = 9e-18
Identities = 38/73 (52%), Positives = 55/73 (75%), Gaps = 1/73 (1%)
Frame = +2
Query: 278 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKT-IKAQIWDTAGQE 454
K+VL+GDS VGKSSL+ RF +++F+ +STIG F T+++ +D T +K +IWDTAGQE
Sbjct: 16 KLVLLGDSAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTLPIDENTSVKLEIWDTAGQE 75
Query: 455 RYRAITSAYYRGA 493
RY+++ YYR A
Sbjct: 76 RYKSLAPMYYRNA 88
>SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 201
Score = 77.8 bits (183), Expect = 1e-15
Identities = 29/71 (40%), Positives = 56/71 (78%)
Frame = +2
Query: 275 FKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQE 454
FK+V +G+ VGK+SL++RF ++F+ ++TIG++F ++++ ++ +T++ Q+WDTAGQE
Sbjct: 12 FKLVFLGEQSVGKTSLITRFMYDQFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQE 71
Query: 455 RYRAITSAYYR 487
R+R++ +Y R
Sbjct: 72 RFRSLIPSYIR 82
Score = 29.5 bits (63), Expect = 0.37
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +3
Query: 510 YDIAKHLSYENVERWLRELRDPR 578
YDI H S+ N E+W+ ++R R
Sbjct: 91 YDITNHNSFVNTEKWIEDVRAER 113
>SPAC16.01 |rho2||Rho family GTPase Rho2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 200
Score = 58.0 bits (134), Expect = 9e-10
Identities = 29/72 (40%), Positives = 41/72 (56%)
Frame = +2
Query: 278 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQER 457
K+V++GD GK+SLLS FT F E T+ + + VDGK+++ +WDTAGQE
Sbjct: 10 KLVVVGDGACGKTSLLSVFTLGYFPTEYVPTVFENYVS-DCRVDGKSVQLALWDTAGQEE 68
Query: 458 YRAITSAYYRGA 493
Y + Y A
Sbjct: 69 YERLRPMSYAKA 80
>SPAC23C4.08 |rho3||Rho family GTPase Rho3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 205
Score = 58.0 bits (134), Expect = 9e-10
Identities = 30/69 (43%), Positives = 41/69 (59%)
Frame = +2
Query: 278 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQER 457
K+V++GD GK+SLL+ FT+ F + TI E I VDG +I+ +WDTAGQE
Sbjct: 15 KIVILGDGAAGKTSLLNVFTKGYFPQVYEPTI-FENYIHDIFVDGNSIELSLWDTAGQEE 73
Query: 458 YRAITSAYY 484
Y + S Y
Sbjct: 74 YDQLRSLSY 82
>SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 216
Score = 56.8 bits (131), Expect = 2e-09
Identities = 26/70 (37%), Positives = 38/70 (54%)
Frame = +2
Query: 275 FKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQE 454
FK+VL+GD G GK++ + R EF + +T+GVE + I +WDTAGQE
Sbjct: 10 FKLVLVGDGGTGKTTFVKRHLTGEFEKKYIATLGVEVHPLHFHTNFGEICFNVWDTAGQE 69
Query: 455 RYRAITSAYY 484
+ + YY
Sbjct: 70 KLGGLRDGYY 79
Score = 25.0 bits (52), Expect = 8.1
Identities = 7/19 (36%), Positives = 13/19 (68%)
Frame = +3
Query: 510 YDIAKHLSYENVERWLREL 566
+D+ ++Y+NV W R+L
Sbjct: 89 FDVTSRITYKNVPHWWRDL 107
>SPAC1565.06c |spg1|sid3|GTPase Spg1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 198
Score = 55.6 bits (128), Expect = 5e-09
Identities = 24/61 (39%), Positives = 36/61 (59%)
Frame = +2
Query: 278 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQER 457
KV +IGDS +GK+SL+ + + F+ ES T+GV F ++I + I IWD GQ
Sbjct: 12 KVGMIGDSSIGKTSLMVTYVQGSFDEESTQTLGVNFMEKTISIRNTEITFSIWDLGGQRE 71
Query: 458 Y 460
+
Sbjct: 72 F 72
>SPAC17H9.09c |ras1|ste5|GTPase Ras1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 219
Score = 52.8 bits (121), Expect = 4e-08
Identities = 27/71 (38%), Positives = 41/71 (57%)
Frame = +2
Query: 275 FKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQE 454
+K+V++GD GVGKS+L + ++ F E TI + + E+DG+ + DTAGQE
Sbjct: 9 YKLVVVGDGGVGKSALTIQLIQSHFVDEYDPTIEDSYR-KKCEIDGEGALLDVLDTAGQE 67
Query: 455 RYRAITSAYYR 487
Y A+ Y R
Sbjct: 68 EYSAMREQYMR 78
>SPAC20H4.11c |rho5||Rho family GTPase Rho5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 200
Score = 50.0 bits (114), Expect = 2e-07
Identities = 25/69 (36%), Positives = 38/69 (55%)
Frame = +2
Query: 278 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQER 457
K+V++GD GK+ LL F++ F T+ + +EVDG+ I+ +WDTAGQE
Sbjct: 8 KLVIVGDGACGKTCLLIVFSKGTFPEVYVPTVFENYVA-DVEVDGRHIELALWDTAGQED 66
Query: 458 YRAITSAYY 484
Y + Y
Sbjct: 67 YDRLRPLSY 75
>SPAC1F7.04 |rho1||Rho family GTPase Rho1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 202
Score = 49.6 bits (113), Expect = 3e-07
Identities = 24/69 (34%), Positives = 38/69 (55%)
Frame = +2
Query: 278 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQER 457
K+V++GD GK+ LL F++ F T+ + +EVDG+ ++ +WDTAGQE
Sbjct: 8 KLVIVGDGACGKTCLLIVFSKGTFPEVYVPTVFENYVA-DVEVDGRHVELALWDTAGQED 66
Query: 458 YRAITSAYY 484
Y + Y
Sbjct: 67 YDRLRPLSY 75
>SPAC16A10.04 |rho4||Rho family GTPase Rho4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 203
Score = 44.4 bits (100), Expect = 1e-05
Identities = 24/70 (34%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Frame = +2
Query: 278 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATR-SIEVDGKTIKAQIWDTAGQE 454
K+V++GD G GK+ LL F+ F T+ + T + + K I+ +WDTAGQE
Sbjct: 16 KLVVVGDGGCGKTCLLIVFSSGTFPERYVPTVFENYITDITYGPNSKVIELALWDTAGQE 75
Query: 455 RYRAITSAYY 484
Y + Y
Sbjct: 76 EYDRLRPLSY 85
>SPBC428.16c |rhb1||Rheb GTPase Rhb1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 185
Score = 42.7 bits (96), Expect = 4e-05
Identities = 23/71 (32%), Positives = 38/71 (53%)
Frame = +2
Query: 278 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQER 457
++ ++G VGKSSL ++ N F TI F+ ++I+ G+ +I DTAGQ+
Sbjct: 8 RIAVLGSRSVGKSSLTVQYVENHFVESYYPTIENTFS-KNIKYKGQEFATEIIDTAGQDE 66
Query: 458 YRAITSAYYRG 490
Y + S + G
Sbjct: 67 YSILNSKHSIG 77
>SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 192
Score = 41.5 bits (93), Expect = 9e-05
Identities = 22/69 (31%), Positives = 37/69 (53%)
Frame = +2
Query: 278 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQER 457
K V++GD VGK+ LL +T N+F + T+ +A ++ + + ++DTAGQE
Sbjct: 5 KCVVVGDGAVGKTCLLISYTTNKFPSDYVPTVFDNYAV-TVMIGDEPYTLGLFDTAGQED 63
Query: 458 YRAITSAYY 484
Y + Y
Sbjct: 64 YDRLRPLSY 72
>SPAC22F3.05c |alp41||ADP-ribosylation factor
Alp41|Schizosaccharomyces pombe|chr 1|||Manual
Length = 186
Score = 40.7 bits (91), Expect = 2e-04
Identities = 24/78 (30%), Positives = 39/78 (50%)
Frame = +2
Query: 278 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQER 457
+V+L+G GK+++L + N E T G F R++EV+G ++ IWD GQ+
Sbjct: 18 RVLLLGLDNAGKTTILKCLLNEDVN-EVSPTFG--FQIRTLEVEG--LRFTIWDIGGQKT 72
Query: 458 YRAITSAYYRGAWARCWL 511
R Y+ A W+
Sbjct: 73 LRNFWKNYFESTEAIIWV 90
>SPBC1539.08 |||ADP-ribosylation factor, Arf
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 184
Score = 37.5 bits (83), Expect = 0.001
Identities = 19/71 (26%), Positives = 38/71 (53%)
Frame = +2
Query: 278 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQER 457
+++++G GK+++L + N+ ++ + T+G T V K IK +WD GQ++
Sbjct: 23 RILMLGLDAAGKTTILYKLKLNQ-SVVTIPTVGFNVET----VTYKNIKFNVWDVGGQDK 77
Query: 458 YRAITSAYYRG 490
R + Y+ G
Sbjct: 78 IRPLWRHYFTG 88
>SPBC4F6.18c |arf1||ADP-ribosylation factor Arf1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 180
Score = 33.1 bits (72), Expect = 0.030
Identities = 17/70 (24%), Positives = 36/70 (51%)
Frame = +2
Query: 278 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQER 457
+++++G GK+++L + E + + TIG T V+ + I +WD GQ++
Sbjct: 19 RILMVGLDAAGKTTILYKLKLGEI-VTTIPTIGFNVET----VEYRNISFTVWDVGGQDK 73
Query: 458 YRAITSAYYR 487
R + Y++
Sbjct: 74 IRPLWRHYFQ 83
>SPCC320.04c |||GTPase Gem1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 630
Score = 32.3 bits (70), Expect = 0.053
Identities = 20/55 (36%), Positives = 31/55 (56%), Gaps = 3/55 (5%)
Frame = +2
Query: 230 RINQNGHKKDEYDY-LFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTI--GVEF 385
R++QN K +YD +F ++G GK++LLS F N N + +T+ VEF
Sbjct: 407 RVSQN-RKVSKYDRNVFLCFVVGSKSCGKTALLSSFINNNTNRLTPNTVVNSVEF 460
Score = 29.5 bits (63), Expect = 0.37
Identities = 12/23 (52%), Positives = 17/23 (73%)
Frame = +2
Query: 278 KVVLIGDSGVGKSSLLSRFTRNE 346
+VV+ GD GVGKSSL+S + +
Sbjct: 5 RVVICGDQGVGKSSLISALIQED 27
>SPBC1198.05 |||guanylate kinase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 202
Score = 28.7 bits (61), Expect = 0.65
Identities = 17/44 (38%), Positives = 23/44 (52%)
Frame = +2
Query: 281 VVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDG 412
VV+ G SGVGKS+LL R ++ + S R+ E DG
Sbjct: 21 VVVFGPSGVGKSTLLKRLLKDHGDKLGFSVSHTTRTPRAGEKDG 64
>SPAC23H3.13c |gpa2|git8|heterotrimeric G protein alpha-2 subunit
Gpa2 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 354
Score = 28.3 bits (60), Expect = 0.87
Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Frame = +2
Query: 209 LTSTTELRINQNGHKKDEYDYLFKVVLIGDSGVGKSSL---LSRFTRNEFNLESKSTIGV 379
L S E +I +N KKD+ ++KV+L+G S GKS++ + +N F+ E T +
Sbjct: 16 LNSKIEKQI-ENASKKDKK--IYKVLLLGASDSGKSTISKQIKILNKNGFSQEEIMTF-I 71
Query: 380 EFATRSIEVDGKTI 421
R++ KT+
Sbjct: 72 PVIRRNLLESAKTL 85
>SPBC354.01 |gtp1|SPBC649.06|GTP binding protein
Gtp1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 363
Score = 27.5 bits (58), Expect = 1.5
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 4/67 (5%)
Frame = +2
Query: 236 NQNGHKKDEYDYL----FKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIE 403
+++G K + +D L +V IG VGKS+LLS T+ + S + +E
Sbjct: 46 SKSGPKGEGFDVLKSGDARVAFIGFPSVGKSTLLSAITKTKSATASYEFTTLTAIPGVLE 105
Query: 404 VDGKTIK 424
DG I+
Sbjct: 106 YDGAEIQ 112
>SPAC4G9.19 |||DNAJ domain protein DNAJB family|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 270
Score = 27.5 bits (58), Expect = 1.5
Identities = 13/34 (38%), Positives = 21/34 (61%), Gaps = 2/34 (5%)
Frame = -3
Query: 381 STPMVDL--DSKLNSFLVKRDRRLLLPTPESPMS 286
ST M DL D +++ FL+ R++ +PT + P S
Sbjct: 219 STGMADLSKDDRISRFLILREQSKQIPTQQKPSS 252
>SPAC4F10.11 |spn1||septin Spn1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 469
Score = 25.8 bits (54), Expect = 4.6
Identities = 13/35 (37%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Frame = +2
Query: 275 FKVVLIGDSGVGKSSLLSR-FTRNEFNLESKSTIG 376
F V+++G+SG GKS+L++ R+ + KS G
Sbjct: 96 FNVLVLGESGSGKSTLVNTLLNRDVYPPTQKSLTG 130
>SPAC24C9.15c |spn5|mde9, meu28|septin Spn5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 464
Score = 25.8 bits (54), Expect = 4.6
Identities = 13/57 (22%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = +2
Query: 281 VVLIGDSGVGKSSLLSRFTR-NEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAG 448
++++G+S +GK++ ++ F + N+ N K T+ ++ + I DT G
Sbjct: 121 LIVVGESSLGKTTFVNSFLQSNDTNFRPKKTMDFVEHKATLSDGDQKFNLTIVDTPG 177
>SPCC550.04c |gpi2||pig-C|Schizosaccharomyces pombe|chr 3|||Manual
Length = 324
Score = 25.0 bits (52), Expect = 8.1
Identities = 7/12 (58%), Positives = 10/12 (83%)
Frame = -3
Query: 264 YSSFLCPFWFIR 229
+ SF+CP WFI+
Sbjct: 289 FISFICPIWFIK 300
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,216,093
Number of Sequences: 5004
Number of extensions: 41450
Number of successful extensions: 169
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 147
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 160
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 250133048
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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