Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20411
(581 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_13045| Best HMM Match : Ras (HMM E-Value=0) 152 2e-37
SB_29253| Best HMM Match : Ras (HMM E-Value=2.8e-05) 130 8e-31
SB_4971| Best HMM Match : Ras (HMM E-Value=0) 115 2e-26
SB_8853| Best HMM Match : No HMM Matches (HMM E-Value=.) 109 2e-24
SB_24842| Best HMM Match : No HMM Matches (HMM E-Value=.) 101 4e-22
SB_22342| Best HMM Match : No HMM Matches (HMM E-Value=.) 99 3e-21
SB_36483| Best HMM Match : Ras (HMM E-Value=0) 97 7e-21
SB_33745| Best HMM Match : Ras (HMM E-Value=2.5e-21) 95 4e-20
SB_17958| Best HMM Match : No HMM Matches (HMM E-Value=.) 95 4e-20
SB_27557| Best HMM Match : Ras (HMM E-Value=0) 94 7e-20
SB_7589| Best HMM Match : Ras (HMM E-Value=0) 93 2e-19
SB_32061| Best HMM Match : No HMM Matches (HMM E-Value=.) 91 6e-19
SB_50855| Best HMM Match : Ras (HMM E-Value=0) 91 8e-19
SB_28695| Best HMM Match : Ras (HMM E-Value=0) 89 2e-18
SB_58218| Best HMM Match : Ras (HMM E-Value=1.4013e-44) 83 2e-16
SB_48712| Best HMM Match : No HMM Matches (HMM E-Value=.) 82 4e-16
SB_24843| Best HMM Match : No HMM Matches (HMM E-Value=.) 77 8e-15
SB_3743| Best HMM Match : No HMM Matches (HMM E-Value=.) 77 8e-15
SB_8315| Best HMM Match : Ras (HMM E-Value=0) 71 5e-13
SB_34767| Best HMM Match : No HMM Matches (HMM E-Value=.) 71 7e-13
SB_10811| Best HMM Match : Ras (HMM E-Value=0) 70 2e-12
SB_44625| Best HMM Match : Ras (HMM E-Value=0) 69 4e-12
SB_41076| Best HMM Match : Ras (HMM E-Value=1.90016e-42) 65 5e-11
SB_56256| Best HMM Match : Ras (HMM E-Value=8.9e-31) 61 7e-10
SB_22528| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 1e-07
SB_46477| Best HMM Match : No HMM Matches (HMM E-Value=.) 53 1e-07
SB_50523| Best HMM Match : Ras (HMM E-Value=0) 52 3e-07
SB_54971| Best HMM Match : Ras (HMM E-Value=0) 52 3e-07
SB_53183| Best HMM Match : Ras (HMM E-Value=0) 52 5e-07
SB_17524| Best HMM Match : Ras (HMM E-Value=2.1e-10) 51 6e-07
SB_6223| Best HMM Match : Ras (HMM E-Value=0) 49 2e-06
SB_47462| Best HMM Match : Ras (HMM E-Value=0) 49 2e-06
SB_12680| Best HMM Match : Ras (HMM E-Value=3.4e-05) 49 3e-06
SB_24106| Best HMM Match : Ras (HMM E-Value=1e-35) 48 4e-06
SB_25972| Best HMM Match : MIF4G (HMM E-Value=4.9e-40) 48 7e-06
SB_32162| Best HMM Match : Ras (HMM E-Value=4.7e-31) 46 3e-05
SB_6284| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 3e-05
SB_33743| Best HMM Match : Ras (HMM E-Value=2e-34) 44 7e-05
SB_58700| Best HMM Match : Ras (HMM E-Value=2.7e-15) 44 1e-04
SB_38760| Best HMM Match : Ras (HMM E-Value=4.6e-06) 44 1e-04
SB_11757| Best HMM Match : Ras (HMM E-Value=0) 43 2e-04
SB_45967| Best HMM Match : Ras (HMM E-Value=2.1e-07) 42 3e-04
SB_22243| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 5e-04
SB_49252| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 8e-04
SB_39864| Best HMM Match : Ras (HMM E-Value=1.6e-30) 41 8e-04
SB_52002| Best HMM Match : Ras (HMM E-Value=2.3e-19) 40 0.001
SB_1645| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.001
SB_54000| Best HMM Match : MMR_HSR1 (HMM E-Value=1.8) 40 0.002
SB_33691| Best HMM Match : Ras (HMM E-Value=2.8e-13) 39 0.003
SB_10598| Best HMM Match : LRR_1 (HMM E-Value=4.4e-19) 39 0.003
SB_22529| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.003
SB_39092| Best HMM Match : Arf (HMM E-Value=8e-36) 38 0.005
SB_53421| Best HMM Match : Arf (HMM E-Value=0) 38 0.005
SB_45519| Best HMM Match : RNB (HMM E-Value=1.6e-35) 38 0.005
SB_33999| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.006
SB_39585| Best HMM Match : Ras (HMM E-Value=6e-35) 38 0.008
SB_42246| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.010
SB_55155| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.032
SB_37042| Best HMM Match : Arf (HMM E-Value=0) 36 0.032
SB_8803| Best HMM Match : Ras (HMM E-Value=7.9e-30) 36 0.032
SB_38511| Best HMM Match : Ras (HMM E-Value=1.2e-22) 35 0.042
SB_5222| Best HMM Match : Ras (HMM E-Value=2.9e-09) 35 0.042
SB_42281| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.056
SB_18358| Best HMM Match : Arf (HMM E-Value=0) 35 0.056
SB_56255| Best HMM Match : Arf (HMM E-Value=0) 34 0.074
SB_22530| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.097
SB_52502| Best HMM Match : GTP_CDC (HMM E-Value=1.9e-06) 33 0.13
SB_51370| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.13
SB_642| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.13
SB_11310| Best HMM Match : Arf (HMM E-Value=0) 33 0.22
SB_12307| Best HMM Match : Death (HMM E-Value=0.00097) 32 0.39
SB_36446| Best HMM Match : GTP_CDC (HMM E-Value=0) 31 0.52
SB_35222| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.69
SB_45581| Best HMM Match : Ras (HMM E-Value=0.069) 31 0.69
SB_1071| Best HMM Match : Ras (HMM E-Value=0) 31 0.69
SB_38579| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.91
SB_34024| Best HMM Match : VLPT (HMM E-Value=3.7) 31 0.91
SB_7861| Best HMM Match : MMR_HSR1 (HMM E-Value=0.96) 31 0.91
SB_15869| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.2
SB_9680| Best HMM Match : Ank (HMM E-Value=4e-20) 30 1.6
SB_51788| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.6
SB_20133| Best HMM Match : Extensin_2 (HMM E-Value=2.1) 29 2.8
SB_11841| Best HMM Match : Ras (HMM E-Value=0) 29 2.8
SB_10158| Best HMM Match : MMR_HSR1 (HMM E-Value=9.4e-08) 29 2.8
SB_43575| Best HMM Match : Sina (HMM E-Value=0) 29 2.8
SB_16073| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.8
SB_15868| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.8
SB_57342| Best HMM Match : Arf (HMM E-Value=0) 29 3.7
SB_53088| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.7
SB_37124| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.8
SB_15207| Best HMM Match : Arf (HMM E-Value=1.9e-05) 28 6.4
SB_17523| Best HMM Match : MMR_HSR1 (HMM E-Value=4.2) 27 8.5
SB_35038| Best HMM Match : Ras (HMM E-Value=6.8e-13) 27 8.5
SB_27378| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.5
SB_7886| Best HMM Match : Cbl_N3 (HMM E-Value=4.9) 27 8.5
>SB_13045| Best HMM Match : Ras (HMM E-Value=0)
Length = 629
Score = 152 bits (369), Expect = 2e-37
Identities = 70/79 (88%), Positives = 77/79 (97%)
Frame = +2
Query: 257 DEYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIW 436
D YDYL+K+VLIGDSGVGKSSLLSRFTRNEF++ESKSTIGVEFATRSI+V+GK IKAQ+W
Sbjct: 7 DHYDYLYKIVLIGDSGVGKSSLLSRFTRNEFDIESKSTIGVEFATRSIQVEGKIIKAQVW 66
Query: 437 DTAGQERYRAITSAYYRGA 493
DTAGQERYRAITSAYYRGA
Sbjct: 67 DTAGQERYRAITSAYYRGA 85
Score = 30.3 bits (65), Expect = 1.2
Identities = 10/21 (47%), Positives = 17/21 (80%)
Frame = +3
Query: 510 YDIAKHLSYENVERWLRELRD 572
YD+ K ++++VERWL E+R+
Sbjct: 92 YDLTKQKTFQDVERWLLEVRE 112
>SB_29253| Best HMM Match : Ras (HMM E-Value=2.8e-05)
Length = 68
Score = 130 bits (314), Expect = 8e-31
Identities = 62/66 (93%), Positives = 64/66 (96%)
Frame = +2
Query: 245 GHKKDEYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIK 424
G K DEYDYLFKVVLIGDSGVGKS+LLSRFTRNEFNLESKSTIGVEFATRSI+VDGKTIK
Sbjct: 2 GTKDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIK 61
Query: 425 AQIWDT 442
AQIWDT
Sbjct: 62 AQIWDT 67
>SB_4971| Best HMM Match : Ras (HMM E-Value=0)
Length = 209
Score = 115 bits (277), Expect = 2e-26
Identities = 54/78 (69%), Positives = 64/78 (82%)
Frame = +2
Query: 260 EYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWD 439
EYDYLFK++LIGDSGVGKSSLL RF + F+ STIGV+F R++ VDGKTIK QIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSSLLLRFADDTFSNTYISTIGVDFKIRTLTVDGKTIKLQIWD 63
Query: 440 TAGQERYRAITSAYYRGA 493
TAGQER+R +T+AYYR A
Sbjct: 64 TAGQERFRTLTTAYYRSA 81
>SB_8853| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 76
Score = 109 bits (261), Expect = 2e-24
Identities = 47/64 (73%), Positives = 60/64 (93%)
Frame = +2
Query: 254 KDEYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQI 433
+D YDYLFK+VLIGDSGVGKS+LLSR+T+NEF+L SK+TIGVE A R++E++GKT++AQI
Sbjct: 12 EDNYDYLFKIVLIGDSGVGKSNLLSRYTKNEFHLGSKATIGVELAHRNVEIEGKTVRAQI 71
Query: 434 WDTA 445
WDTA
Sbjct: 72 WDTA 75
>SB_24842| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 156
Score = 101 bits (242), Expect = 4e-22
Identities = 41/79 (51%), Positives = 60/79 (75%)
Frame = +2
Query: 257 DEYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIW 436
D+Y YLFK++L+GD+ VGK+ L+ +FT+ F TIGV+F ++++VDG+ +K QIW
Sbjct: 2 DDYSYLFKIILVGDANVGKTCLVRQFTKGYFPPNQGPTIGVDFTIKTVDVDGEKVKLQIW 61
Query: 437 DTAGQERYRAITSAYYRGA 493
DTAGQER+R+IT +YY A
Sbjct: 62 DTAGQERFRSITQSYYHNA 80
>SB_22342| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 778
Score = 98.7 bits (235), Expect = 3e-21
Identities = 57/99 (57%), Positives = 67/99 (67%), Gaps = 21/99 (21%)
Frame = +2
Query: 260 EYDYLFKVVLIGDSGVGKSSLLSRFT--------------------RNEFNLESK-STIG 376
EYDYLFK++LIGDSGVGKS LL RF +++ ES STIG
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFALSLAQKLLLFRIYSHPTLSQQDDTYTESYISTIG 63
Query: 377 VEFATRSIEVDGKTIKAQIWDTAGQERYRAITSAYYRGA 493
V+F R+IE+DGKTIK QIWDTAGQER+R ITS+YYRGA
Sbjct: 64 VDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGA 102
>SB_36483| Best HMM Match : Ras (HMM E-Value=0)
Length = 213
Score = 97.5 bits (232), Expect = 7e-21
Identities = 40/76 (52%), Positives = 60/76 (78%)
Frame = +2
Query: 266 DYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTA 445
DY+FKV+++GD VGKSSL+ RF +EFN + +TIGV+F ++DGK +K Q+WDTA
Sbjct: 8 DYVFKVLVLGDCNVGKSSLIRRFHDDEFNAQLCTTIGVDFFIHDFDLDGKKVKLQLWDTA 67
Query: 446 GQERYRAITSAYYRGA 493
G+E+YRA++ +++RGA
Sbjct: 68 GEEKYRALSRSFFRGA 83
>SB_33745| Best HMM Match : Ras (HMM E-Value=2.5e-21)
Length = 115
Score = 95.1 bits (226), Expect = 4e-20
Identities = 40/77 (51%), Positives = 58/77 (75%)
Frame = +2
Query: 263 YDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDT 442
+DY+FK+++IG+S VGK+S L R+ + F ST+G++F +++ + K +K QIWDT
Sbjct: 18 FDYMFKLLIIGNSAVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRNDKRVKLQIWDT 77
Query: 443 AGQERYRAITSAYYRGA 493
AGQERYR IT+AYYRGA
Sbjct: 78 AGQERYRTITTAYYRGA 94
>SB_17958| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 271
Score = 95.1 bits (226), Expect = 4e-20
Identities = 41/79 (51%), Positives = 56/79 (70%)
Frame = +2
Query: 257 DEYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIW 436
D Y FKV+++GD GVGK+SL+ RFT+ F S ST+GV+ TR +++ G +K Q W
Sbjct: 6 DNCKYSFKVLVVGDPGVGKTSLIRRFTKGYFCDNSSSTVGVDVGTRVLDIHGDRVKLQCW 65
Query: 437 DTAGQERYRAITSAYYRGA 493
DTAGQE++R IT +YYR A
Sbjct: 66 DTAGQEKFRGITQSYYRNA 84
>SB_27557| Best HMM Match : Ras (HMM E-Value=0)
Length = 184
Score = 94.3 bits (224), Expect = 7e-20
Identities = 45/79 (56%), Positives = 58/79 (73%), Gaps = 1/79 (1%)
Frame = +2
Query: 254 KDEYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKT-IKAQ 430
K +Y Y F+++LIGDS VGKSSLL +FT +F S T+GV+F R +E+ G IK Q
Sbjct: 7 KPKYFYQFRIILIGDSTVGKSSLLRQFTEGQFFENSDPTVGVDFHVRVLELKGDVRIKLQ 66
Query: 431 IWDTAGQERYRAITSAYYR 487
IWDTAGQER+R+IT +YYR
Sbjct: 67 IWDTAGQERFRSITYSYYR 85
>SB_7589| Best HMM Match : Ras (HMM E-Value=0)
Length = 640
Score = 92.7 bits (220), Expect = 2e-19
Identities = 42/98 (42%), Positives = 63/98 (64%)
Frame = +2
Query: 200 DRFLTSTTELRINQNGHKKDEYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGV 379
D ++T +N + + + +FK+VL GD+ VGKSS + R RN F+ ST+GV
Sbjct: 418 DSISEASTNTALNMSNVDERVPERMFKIVLAGDAAVGKSSFILRLCRNRFHSALNSTLGV 477
Query: 380 EFATRSIEVDGKTIKAQIWDTAGQERYRAITSAYYRGA 493
+F +++ VDGKT Q+WDTAGQER+R+I +Y+R A
Sbjct: 478 DFQMKTLVVDGKTYALQLWDTAGQERFRSIAKSYFRKA 515
>SB_32061| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 919
Score = 91.1 bits (216), Expect = 6e-19
Identities = 39/72 (54%), Positives = 56/72 (77%)
Frame = +2
Query: 278 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQER 457
K++++G+SGVGKSSLL RFT + F+ + +TIGV+F +++ V+G K IWDTAGQER
Sbjct: 10 KILIVGESGVGKSSLLLRFTDDTFDPDIGATIGVDFKVKTLTVEGNKAKLAIWDTAGQER 69
Query: 458 YRAITSAYYRGA 493
+R +T +YYRGA
Sbjct: 70 FRTLTPSYYRGA 81
>SB_50855| Best HMM Match : Ras (HMM E-Value=0)
Length = 733
Score = 90.6 bits (215), Expect = 8e-19
Identities = 40/75 (53%), Positives = 56/75 (74%)
Frame = +2
Query: 275 FKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQE 454
FK+VL+G+S VGKSSL+ RF + +F+ +STIG F T+++ +D T+K +IWDTAGQE
Sbjct: 22 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQE 81
Query: 455 RYRAITSAYYRGAWA 499
RY ++ YYRGA A
Sbjct: 82 RYHSLAPMYYRGAQA 96
>SB_28695| Best HMM Match : Ras (HMM E-Value=0)
Length = 1058
Score = 89.0 bits (211), Expect = 2e-18
Identities = 40/74 (54%), Positives = 55/74 (74%)
Frame = +2
Query: 272 LFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQ 451
+FKVV IGDSGVGKSS L RF +++ +TIGV+F +++ V+G+ I Q+WDTAGQ
Sbjct: 896 VFKVVFIGDSGVGKSSFLHRFCHDQWKPSFTATIGVDFQIKTMNVNGQCIAIQLWDTAGQ 955
Query: 452 ERYRAITSAYYRGA 493
ER+R+IT Y+R A
Sbjct: 956 ERFRSITKQYFRKA 969
>SB_58218| Best HMM Match : Ras (HMM E-Value=1.4013e-44)
Length = 212
Score = 82.6 bits (195), Expect = 2e-16
Identities = 35/76 (46%), Positives = 52/76 (68%)
Frame = +2
Query: 272 LFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQ 451
LFKVVL+G++GVGK+SL R N F ++TIG++ ++ +++ K + +WDTAG
Sbjct: 11 LFKVVLLGEAGVGKTSLFYRLKENHFTPGRRNTIGIDSCSKFVKIGEKQVTLSVWDTAGV 70
Query: 452 ERYRAITSAYYRGAWA 499
ER+R +T YYRGA A
Sbjct: 71 ERFRTVTKNYYRGAHA 86
>SB_48712| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 410
Score = 81.8 bits (193), Expect = 4e-16
Identities = 34/69 (49%), Positives = 52/69 (75%)
Frame = +2
Query: 287 LIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQERYRA 466
L D GVGKSSL++RF +F+ +S TIGVEF + +++DG++ QIWDTAGQER+++
Sbjct: 216 LSSDGGVGKSSLMNRFVCGKFDTQSFHTIGVEFLNKDVKLDGESYTLQIWDTAGQERFKS 275
Query: 467 ITSAYYRGA 493
+ + +YRG+
Sbjct: 276 LRTPFYRGS 284
>SB_24843| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 265
Score = 77.4 bits (182), Expect = 8e-15
Identities = 34/72 (47%), Positives = 53/72 (73%), Gaps = 1/72 (1%)
Frame = +2
Query: 275 FKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQE 454
FK+++IGDS VGK+ L R +F +++TIGV+F +S+E++G+ +K Q+WDTAGQE
Sbjct: 47 FKIIIIGDSNVGKTCLAYRLCTGKFPERTETTIGVDFWEKSLELNGEFVKLQLWDTAGQE 106
Query: 455 RYR-AITSAYYR 487
R+R ++ YYR
Sbjct: 107 RFRKSMVCHYYR 118
>SB_3743| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 365
Score = 77.4 bits (182), Expect = 8e-15
Identities = 34/74 (45%), Positives = 51/74 (68%)
Frame = +2
Query: 278 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQER 457
K+V +GD GVGKSSL RF + F + + TIG++F T+++ +D ++ QIWDTAGQER
Sbjct: 165 KIVFLGDQGVGKSSLAGRFIYDIFEEKYQPTIGIDFMTKTVLLDDFEVRLQIWDTAGQER 224
Query: 458 YRAITSAYYRGAWA 499
+R + +Y R + A
Sbjct: 225 FRCLIHSYIRDSEA 238
>SB_8315| Best HMM Match : Ras (HMM E-Value=0)
Length = 565
Score = 71.3 bits (167), Expect = 5e-13
Identities = 35/87 (40%), Positives = 55/87 (63%), Gaps = 11/87 (12%)
Frame = +2
Query: 266 DYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSI-----------EVDG 412
++L K + +GDSGVGK+SLL ++T + FN TIG++F + + G
Sbjct: 104 EFLIKFLALGDSGVGKTSLLYQYTDSHFNPRFVPTIGIDFREKRVVHHPLNPDGERSTRG 163
Query: 413 KTIKAQIWDTAGQERYRAITSAYYRGA 493
+ I Q+WDTAGQER+R++T+A++R A
Sbjct: 164 QRIHLQLWDTAGQERFRSLTTAFFRDA 190
>SB_34767| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 216
Score = 70.9 bits (166), Expect = 7e-13
Identities = 34/80 (42%), Positives = 52/80 (65%), Gaps = 1/80 (1%)
Frame = +2
Query: 257 DEYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIE-VDGKTIKAQI 433
++Y FKV+++GD GK S + R+ N ++ K TIGV+FA ++I+ TI+ QI
Sbjct: 13 NQYTRNFKVLVVGDILTGKQSFVKRYVNNIWHPLYKPTIGVDFALKTIQWAQNTTIRLQI 72
Query: 434 WDTAGQERYRAITSAYYRGA 493
W AGQER+ ++T YY+GA
Sbjct: 73 WLIAGQERFSSMTRVYYKGA 92
>SB_10811| Best HMM Match : Ras (HMM E-Value=0)
Length = 304
Score = 69.7 bits (163), Expect = 2e-12
Identities = 28/46 (60%), Positives = 38/46 (82%)
Frame = +2
Query: 356 ESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQERYRAITSAYYRGA 493
+S TIGVEF ++ + V GK++K QIWDTAGQER+R++T +YYRGA
Sbjct: 123 DSSHTIGVEFGSKIVNVGGKSVKLQIWDTAGQERFRSVTRSYYRGA 168
>SB_44625| Best HMM Match : Ras (HMM E-Value=0)
Length = 128
Score = 68.5 bits (160), Expect = 4e-12
Identities = 28/42 (66%), Positives = 35/42 (83%)
Frame = +2
Query: 365 STIGVEFATRSIEVDGKTIKAQIWDTAGQERYRAITSAYYRG 490
+TIGV+F R+I +DG+ +K QIWDTAGQER+R ITS YYRG
Sbjct: 8 TTIGVDFKIRTINIDGEKVKLQIWDTAGQERFRTITSTYYRG 49
>SB_41076| Best HMM Match : Ras (HMM E-Value=1.90016e-42)
Length = 704
Score = 64.9 bits (151), Expect = 5e-11
Identities = 35/82 (42%), Positives = 51/82 (62%), Gaps = 2/82 (2%)
Frame = +2
Query: 251 KKDEYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLES-KSTIGV-EFATRSIEVDGKTIK 424
++ +DY FK ++IG+SGVGKS L+++ F+L+ ST+ + + D K IK
Sbjct: 343 RQPNWDYEFKTLIIGNSGVGKSCLVNKLKNPHFDLKFVTSTVSMNDIFWEYFLYDNKKIK 402
Query: 425 AQIWDTAGQERYRAITSAYYRG 490
I DTAGQERY +I AY+RG
Sbjct: 403 LTIGDTAGQERYFSILPAYFRG 424
>SB_56256| Best HMM Match : Ras (HMM E-Value=8.9e-31)
Length = 506
Score = 60.9 bits (141), Expect = 7e-10
Identities = 27/68 (39%), Positives = 46/68 (67%)
Frame = +2
Query: 281 VVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQERY 460
V+L+GDS GK++LL+ + RN+FN + ++T+ +T ++EVDG+ I+ +WDT+G E Y
Sbjct: 235 VILVGDSECGKTALLNAYVRNQFNEKYEATVFNSLST-AVEVDGERIELTLWDTSGHEDY 293
Query: 461 RAITSAYY 484
+ Y
Sbjct: 294 DHVRPLSY 301
>SB_22528| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 467
Score = 53.6 bits (123), Expect = 1e-07
Identities = 28/69 (40%), Positives = 40/69 (57%)
Frame = +2
Query: 278 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQER 457
K+V++GD GVGKS+ L T N F E T+ +++ +I +DGK +WDTAGQE
Sbjct: 7 KLVVVGDGGVGKSAFLITATTNAFPGEYIPTVFDNYSS-NIMLDGKAYNVGLWDTAGQED 65
Query: 458 YRAITSAYY 484
Y + Y
Sbjct: 66 YDRLRPLSY 74
>SB_46477| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6116
Score = 53.2 bits (122), Expect = 1e-07
Identities = 26/69 (37%), Positives = 40/69 (57%)
Frame = +2
Query: 278 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQER 457
K+V++GD GK+ LL F++++F T+ + IEVDGK ++ +WDTAGQE
Sbjct: 5931 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVA-DIEVDGKQVELALWDTAGQED 5989
Query: 458 YRAITSAYY 484
Y + Y
Sbjct: 5990 YDRLRPLSY 5998
>SB_50523| Best HMM Match : Ras (HMM E-Value=0)
Length = 154
Score = 52.4 bits (120), Expect = 3e-07
Identities = 22/28 (78%), Positives = 24/28 (85%)
Frame = +2
Query: 410 GKTIKAQIWDTAGQERYRAITSAYYRGA 493
GK IK QIWDTAGQER+ IT+AYYRGA
Sbjct: 2 GKKIKLQIWDTAGQERFHTITTAYYRGA 29
>SB_54971| Best HMM Match : Ras (HMM E-Value=0)
Length = 239
Score = 52.0 bits (119), Expect = 3e-07
Identities = 23/65 (35%), Positives = 34/65 (52%)
Frame = +2
Query: 290 IGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQERYRAI 469
+GD G GK++ + R EF + +T+GVE IK +WDTAGQE++ +
Sbjct: 38 VGDGGTGKTTFVKRHLTGEFEKKYIATLGVEVHPLIFFTSRGPIKFNVWDTAGQEKFGGL 97
Query: 470 TSAYY 484
YY
Sbjct: 98 RDGYY 102
>SB_53183| Best HMM Match : Ras (HMM E-Value=0)
Length = 834
Score = 51.6 bits (118), Expect = 5e-07
Identities = 24/40 (60%), Positives = 30/40 (75%)
Frame = +2
Query: 254 KDEYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTI 373
K YDYLFK++LIGDSGVGK+ +L RF+ + FN STI
Sbjct: 3 KKSYDYLFKLLLIGDSGVGKTCILFRFSDDAFNTTFISTI 42
>SB_17524| Best HMM Match : Ras (HMM E-Value=2.1e-10)
Length = 159
Score = 51.2 bits (117), Expect = 6e-07
Identities = 24/74 (32%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Frame = +2
Query: 266 DYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFA-TRSIEVDGKTIKAQIWDT 442
D ++K+ L G GVGK+S+ +R + +EF E +S ++ + + K +K +WDT
Sbjct: 6 DEVYKIALCGKMGVGKTSIYTRLSTDEFPEEEQSLHHIDQCFIPLVCICNKKLKIHLWDT 65
Query: 443 AGQERYRAITSAYY 484
G E Y ++T +Y
Sbjct: 66 LGMEEYESLTRNHY 79
>SB_6223| Best HMM Match : Ras (HMM E-Value=0)
Length = 1665
Score = 49.2 bits (112), Expect = 2e-06
Identities = 25/79 (31%), Positives = 44/79 (55%)
Frame = +2
Query: 251 KKDEYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQ 430
++ + D +K+V++G GVGKS+L +F ++ F + TI + + + +D +
Sbjct: 4 EQKDVDKQYKLVVVGGGGVGKSALTIQFIQSHFVSDYDPTIEDSYRKQCV-IDERVAHLD 62
Query: 431 IWDTAGQERYRAITSAYYR 487
I DTAGQE + A+ Y R
Sbjct: 63 ILDTAGQEEFSAMREQYMR 81
>SB_47462| Best HMM Match : Ras (HMM E-Value=0)
Length = 385
Score = 49.2 bits (112), Expect = 2e-06
Identities = 26/71 (36%), Positives = 41/71 (57%)
Frame = +2
Query: 275 FKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQE 454
+KVV++G GVGKS+L +F +F + TI +F + IEVD +I DTAG E
Sbjct: 4 YKVVVLGSGGVGKSALTVQFVTGQFVEKYDPTI-EDFYRKEIEVDNNPSILEILDTAGTE 62
Query: 455 RYRAITSAYYR 487
++ ++ Y +
Sbjct: 63 QFASMRDLYIK 73
>SB_12680| Best HMM Match : Ras (HMM E-Value=3.4e-05)
Length = 243
Score = 48.8 bits (111), Expect = 3e-06
Identities = 32/83 (38%), Positives = 44/83 (53%), Gaps = 9/83 (10%)
Frame = +2
Query: 266 DYLFKVVLIGD-SGVGKSS-LLSRFTRNE-FNLESKSTIGVEFATRSIE---VDGK---T 418
D+ FK++ +GD +G GK LS + N + K TIGV+F IE D K T
Sbjct: 48 DHTFKIMCVGDYTGFGKKGGFLSDYIHNRPLSFYQKPTIGVDFYVHFIEWRETDKKKDST 107
Query: 419 IKAQIWDTAGQERYRAITSAYYR 487
+K Q WD A ER+ +T+ Y R
Sbjct: 108 VKLQFWDVAEHERFLKMTAVYCR 130
>SB_24106| Best HMM Match : Ras (HMM E-Value=1e-35)
Length = 263
Score = 48.4 bits (110), Expect = 4e-06
Identities = 24/62 (38%), Positives = 40/62 (64%)
Frame = +2
Query: 266 DYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTA 445
D+++++ L+GD GVGK++LL RF + F E TI ++ +SI +D T+ +I DTA
Sbjct: 3 DHVYRIALLGDEGVGKTALLVRFLCHRFLGEYDPTIEDKY-RKSINIDDVTVTLEILDTA 61
Query: 446 GQ 451
+
Sbjct: 62 SR 63
>SB_25972| Best HMM Match : MIF4G (HMM E-Value=4.9e-40)
Length = 1265
Score = 47.6 bits (108), Expect = 7e-06
Identities = 19/21 (90%), Positives = 21/21 (100%)
Frame = +3
Query: 510 YDIAKHLSYENVERWLRELRD 572
YDIAKHL+YENVERWL+ELRD
Sbjct: 13 YDIAKHLTYENVERWLKELRD 33
>SB_32162| Best HMM Match : Ras (HMM E-Value=4.7e-31)
Length = 357
Score = 45.6 bits (103), Expect = 3e-05
Identities = 26/72 (36%), Positives = 36/72 (50%)
Frame = +2
Query: 278 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQER 457
KVVL GD+ VGK+S L T+NE LE T + +EV + +WDT G
Sbjct: 8 KVVLTGDNNVGKTSFLINLTQNE--LEGTPTAFANYEL-GLEVGSQKFLLDLWDTEGTTE 64
Query: 458 YRAITSAYYRGA 493
Y + Y+G+
Sbjct: 65 YDRLRPLTYQGS 76
>SB_6284| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 191
Score = 45.6 bits (103), Expect = 3e-05
Identities = 24/69 (34%), Positives = 38/69 (55%)
Frame = +2
Query: 278 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQER 457
K V++GD VGK+ LL +T N+F E T+ +A ++ + G+ ++DTAGQE
Sbjct: 5 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAV-TVMIGGEPYTLGLFDTAGQED 63
Query: 458 YRAITSAYY 484
Y + Y
Sbjct: 64 YDRLRPLSY 72
>SB_33743| Best HMM Match : Ras (HMM E-Value=2e-34)
Length = 241
Score = 44.4 bits (100), Expect = 7e-05
Identities = 17/23 (73%), Positives = 20/23 (86%)
Frame = +2
Query: 419 IKAQIWDTAGQERYRAITSAYYR 487
+K QIWDTAGQER+R IT +YYR
Sbjct: 95 VKLQIWDTAGQERFRTITQSYYR 117
>SB_58700| Best HMM Match : Ras (HMM E-Value=2.7e-15)
Length = 857
Score = 43.6 bits (98), Expect = 1e-04
Identities = 17/36 (47%), Positives = 28/36 (77%)
Frame = +2
Query: 266 DYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTI 373
+YLFKV++IGD GVGK+SL+ R+ F++ ++T+
Sbjct: 669 EYLFKVLVIGDLGVGKTSLIKRYVHQFFSVHYRATV 704
>SB_38760| Best HMM Match : Ras (HMM E-Value=4.6e-06)
Length = 965
Score = 43.6 bits (98), Expect = 1e-04
Identities = 23/60 (38%), Positives = 35/60 (58%)
Frame = +2
Query: 272 LFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQ 451
+ KVV+IG+ GVGKS+L RF F E T+ + + EV G+ + ++ DTAG+
Sbjct: 861 IVKVVIIGEDGVGKSALTVRFLTKRFIGEYDDTLESTY-RQDAEVAGEVVAIELTDTAGE 919
>SB_11757| Best HMM Match : Ras (HMM E-Value=0)
Length = 211
Score = 42.7 bits (96), Expect = 2e-04
Identities = 27/74 (36%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Frame = +2
Query: 278 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATR--SIEVDGKTIKAQIWDTAGQ 451
K V++GD GVGK+SLL + + F S + F T ++EV+ K + DTAGQ
Sbjct: 20 KCVIVGDGGVGKTSLLVSYMMDGF---PNSYVPTAFDTYHVTVEVNKKLCMIEFCDTAGQ 76
Query: 452 ERYRAITSAYYRGA 493
E + A+ Y A
Sbjct: 77 EDFDALRPLCYSSA 90
>SB_45967| Best HMM Match : Ras (HMM E-Value=2.1e-07)
Length = 92
Score = 42.3 bits (95), Expect = 3e-04
Identities = 24/71 (33%), Positives = 37/71 (52%)
Frame = +2
Query: 278 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQER 457
K+ ++G VGKSSL +F +F TI F T++I+ G+ ++ DTAGQ+
Sbjct: 8 KIAVMGFRSVGKSSLTIQFVEGQFVDSYDPTIENTF-TKNIKYKGQEFFLELVDTAGQDE 66
Query: 458 YRAITSAYYRG 490
Y +Y G
Sbjct: 67 YSIFPQSYSMG 77
>SB_22243| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 57
Score = 41.5 bits (93), Expect = 5e-04
Identities = 16/27 (59%), Positives = 21/27 (77%)
Frame = +2
Query: 407 DGKTIKAQIWDTAGQERYRAITSAYYR 487
+G+ I+ +WDTAGQE + AIT AYYR
Sbjct: 30 NGEDIRLMLWDTAGQEEFDAITKAYYR 56
Score = 29.9 bits (64), Expect = 1.6
Identities = 13/44 (29%), Positives = 24/44 (54%)
Frame = +2
Query: 251 KKDEYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVE 382
++++ + KVV++G+ VGKSS++ + L T G E
Sbjct: 2 REEDVEVAIKVVVVGNGAVGKSSMIQSANGEDIRLMLWDTAGQE 45
>SB_49252| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 384
Score = 40.7 bits (91), Expect = 8e-04
Identities = 28/88 (31%), Positives = 42/88 (47%), Gaps = 1/88 (1%)
Frame = +2
Query: 227 LRINQNGHKKDEYDYLFKVVLIGDSGVGKSSLLSRF-TRNEFNLESKSTIGVEFATRSIE 403
L I +GH +Y KVVL+GD+GVGKS ++ R + +E S+ S
Sbjct: 2 LSITSSGHTYKQY----KVVLVGDAGVGKSFVIDRLNSTSEHWQGSRLYKPTTGGHASYF 57
Query: 404 VDGKTIKAQIWDTAGQERYRAITSAYYR 487
+ + DT+G E YR +T Y +
Sbjct: 58 TASNSCHLYLLDTSGLEEYRELTKIYLK 85
>SB_39864| Best HMM Match : Ras (HMM E-Value=1.6e-30)
Length = 421
Score = 40.7 bits (91), Expect = 8e-04
Identities = 17/32 (53%), Positives = 22/32 (68%)
Frame = +2
Query: 404 VDGKTIKAQIWDTAGQERYRAITSAYYRGAWA 499
V+ K K IWDTAGQER++++ YYR A A
Sbjct: 4 VNDKAYKFNIWDTAGQERFKSLAPLYYRDAAA 35
>SB_52002| Best HMM Match : Ras (HMM E-Value=2.3e-19)
Length = 351
Score = 40.3 bits (90), Expect = 0.001
Identities = 24/68 (35%), Positives = 40/68 (58%), Gaps = 2/68 (2%)
Frame = +2
Query: 272 LFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKA--QIWDTA 445
+F+VV++G GVGK+SL+ RF F+ + T+G + +S+ + K A +I DTA
Sbjct: 107 VFRVVVLGSGGVGKTSLVKRFISGTFSEQYTPTVG-DLYEKSVTL-SKDFNAFLEIMDTA 164
Query: 446 GQERYRAI 469
G + A+
Sbjct: 165 GSYPFPAM 172
>SB_1645| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 244
Score = 39.9 bits (89), Expect = 0.001
Identities = 22/76 (28%), Positives = 34/76 (44%), Gaps = 5/76 (6%)
Frame = +2
Query: 278 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEV-----DGKTIKAQIWDT 442
++ ++GDSGVGK+SL+ E + TIG + + GKT + WD
Sbjct: 8 RIAVVGDSGVGKTSLVHLICHEESISSAAWTIGCTVEVKLYDYKEGMPGGKTFFLEFWDI 67
Query: 443 AGQERYRAITSAYYRG 490
G + S +Y G
Sbjct: 68 GGSANHENSRSIFYNG 83
>SB_54000| Best HMM Match : MMR_HSR1 (HMM E-Value=1.8)
Length = 65
Score = 39.5 bits (88), Expect = 0.002
Identities = 20/45 (44%), Positives = 26/45 (57%)
Frame = +2
Query: 242 NGHKKDEYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIG 376
N + + DYL KV+LIGDS VGK+ LL F E ++ T G
Sbjct: 2 NMKPRKKQDYLLKVLLIGDSNVGKTKLLLTFLGQESIVQQMPTAG 46
>SB_33691| Best HMM Match : Ras (HMM E-Value=2.8e-13)
Length = 270
Score = 39.1 bits (87), Expect = 0.003
Identities = 20/58 (34%), Positives = 34/58 (58%)
Frame = +2
Query: 275 FKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAG 448
+K+ ++G GVGK+SLL F ++F+ + T+ ++ S+ +DG I DTAG
Sbjct: 13 YKISILGAGGVGKTSLLKTFFGHKFSEKHVPTVD-DYFIHSVNMDGVYYSTCIVDTAG 69
>SB_10598| Best HMM Match : LRR_1 (HMM E-Value=4.4e-19)
Length = 811
Score = 38.7 bits (86), Expect = 0.003
Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Frame = +2
Query: 278 KVVLIGDSGVGKSSLLSRFTRNEF--NLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQ 451
K+VL+G+SG GK+S E + T+GV +E DG ++ Q+ D AGQ
Sbjct: 262 KLVLLGESGAGKTSCAHGLVECEAINQTLNDGTVGVVIRNWQVEPDG--LEVQVVDCAGQ 319
Query: 452 ERYR 463
RY+
Sbjct: 320 RRYQ 323
>SB_22529| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 206
Score = 38.7 bits (86), Expect = 0.003
Identities = 22/63 (34%), Positives = 34/63 (53%)
Frame = +2
Query: 260 EYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWD 439
E D KVV +GD VGK+S L T + F ++I + ++++E+DGK + D
Sbjct: 5 ELDPTIKVVFVGDKNVGKTSFLYAATTHNFPTGFIASI-FDGYSKTMEIDGKRYTVLLCD 63
Query: 440 TAG 448
T G
Sbjct: 64 TPG 66
>SB_39092| Best HMM Match : Arf (HMM E-Value=8e-36)
Length = 260
Score = 38.3 bits (85), Expect = 0.005
Identities = 21/71 (29%), Positives = 37/71 (52%)
Frame = +2
Query: 278 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQER 457
++ L+G GK++ ++ +F+ + T+G F R + TIK +WD GQ R
Sbjct: 22 ELTLVGLQYSGKTTFVNVIASGQFSEDMIPTVG--FNMRKVSKGNVTIK--VWDIGGQPR 77
Query: 458 YRAITSAYYRG 490
+R++ Y RG
Sbjct: 78 FRSMWERYCRG 88
>SB_53421| Best HMM Match : Arf (HMM E-Value=0)
Length = 625
Score = 38.3 bits (85), Expect = 0.005
Identities = 22/68 (32%), Positives = 34/68 (50%)
Frame = +2
Query: 287 LIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQERYRA 466
+IG GK+++L R E + + T+G T V K I +WD GQ++ RA
Sbjct: 1 MIGLDNAGKTTILYRLKLEEV-VSTVPTLGFNVET----VTYKNISFTVWDIGGQDKIRA 55
Query: 467 ITSAYYRG 490
+ YY+G
Sbjct: 56 LWRVYYQG 63
>SB_45519| Best HMM Match : RNB (HMM E-Value=1.6e-35)
Length = 2748
Score = 38.3 bits (85), Expect = 0.005
Identities = 22/63 (34%), Positives = 33/63 (52%)
Frame = +2
Query: 272 LFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQ 451
+F++ ++G GVGKSS+ R+ +NEF I+ GK ++ DTAGQ
Sbjct: 2598 MFRLCVVGSGGVGKSSVTIRYLKNEFT--------------EIDYCGKLYDIEVVDTAGQ 2643
Query: 452 ERY 460
E Y
Sbjct: 2644 EEY 2646
>SB_33999| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 57
Score = 37.9 bits (84), Expect = 0.006
Identities = 16/37 (43%), Positives = 24/37 (64%)
Frame = +2
Query: 266 DYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIG 376
+ LFKV+++GD+ VGK+S + R+ E K TIG
Sbjct: 20 EILFKVLIVGDATVGKTSFVQRYVHGNTRREYKPTIG 56
>SB_39585| Best HMM Match : Ras (HMM E-Value=6e-35)
Length = 145
Score = 37.5 bits (83), Expect = 0.008
Identities = 14/21 (66%), Positives = 19/21 (90%)
Frame = +2
Query: 431 IWDTAGQERYRAITSAYYRGA 493
IWDTAGQER++++ A+YRGA
Sbjct: 1 IWDTAGQERFQSLGVAFYRGA 21
>SB_42246| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 310
Score = 37.1 bits (82), Expect = 0.010
Identities = 27/85 (31%), Positives = 41/85 (48%)
Frame = +2
Query: 191 LETDRFLTSTTELRINQNGHKKDEYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKST 370
L + R L ++T N+ +D + +VL+G +GVGKS+LL RF F E T
Sbjct: 105 LTSSRLLNNSTSTLPNRRFPLRD-----YSLVLLGQAGVGKSALLVRFCTGRFIHEYDPT 159
Query: 371 IGVEFATRSIEVDGKTIKAQIWDTA 445
+ + + S +D I DTA
Sbjct: 160 LEMTYDV-SATIDEDPATLHITDTA 183
>SB_55155| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 487
Score = 35.5 bits (78), Expect = 0.032
Identities = 18/63 (28%), Positives = 32/63 (50%)
Frame = +2
Query: 278 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQER 457
+++++G G GKS LS ++ + + +T F + DG + IW+ G E+
Sbjct: 168 RILVLGLDGSGKSVFLSALSQGDSSKRPSTTKTEGFNVVCLTTDG--LNLNIWEIGGDEK 225
Query: 458 YRA 466
YRA
Sbjct: 226 YRA 228
>SB_37042| Best HMM Match : Arf (HMM E-Value=0)
Length = 188
Score = 35.5 bits (78), Expect = 0.032
Identities = 19/71 (26%), Positives = 35/71 (49%)
Frame = +2
Query: 278 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQER 457
++V++G GK+++L + E + + TIG T K + IWD GQ++
Sbjct: 21 RIVMLGLDAAGKTTILYKLKLKE-TVSTIPTIGFNVETLQ---PTKNVTLTIWDVGGQDK 76
Query: 458 YRAITSAYYRG 490
R + Y++G
Sbjct: 77 IRPLWRHYFQG 87
>SB_8803| Best HMM Match : Ras (HMM E-Value=7.9e-30)
Length = 517
Score = 35.5 bits (78), Expect = 0.032
Identities = 15/20 (75%), Positives = 18/20 (90%)
Frame = +2
Query: 434 WDTAGQERYRAITSAYYRGA 493
W+ AGQER+R ITS+YYRGA
Sbjct: 374 WE-AGQERFRTITSSYYRGA 392
Score = 27.9 bits (59), Expect = 6.4
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +3
Query: 510 YDIAKHLSYENVERWLREL 566
YDI K SY N+ +WL E+
Sbjct: 399 YDITKRESYNNLHKWLMEV 417
>SB_38511| Best HMM Match : Ras (HMM E-Value=1.2e-22)
Length = 159
Score = 35.1 bits (77), Expect = 0.042
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +2
Query: 449 QERYRAITSAYYRGA 493
QERYRAITSAYYRGA
Sbjct: 2 QERYRAITSAYYRGA 16
Score = 29.5 bits (63), Expect = 2.1
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +3
Query: 510 YDIAKHLSYENVERWLRELR 569
YDIAK S+ N+ +W+ ELR
Sbjct: 23 YDIAKGTSFMNLNKWVEELR 42
>SB_5222| Best HMM Match : Ras (HMM E-Value=2.9e-09)
Length = 181
Score = 35.1 bits (77), Expect = 0.042
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +2
Query: 449 QERYRAITSAYYRGA 493
QERYRAITSAYYRGA
Sbjct: 2 QERYRAITSAYYRGA 16
Score = 29.5 bits (63), Expect = 2.1
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +3
Query: 510 YDIAKHLSYENVERWLRELR 569
YDIAK S+ N+ +W+ ELR
Sbjct: 23 YDIAKGTSFMNLNKWVEELR 42
>SB_42281| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 179
Score = 34.7 bits (76), Expect = 0.056
Identities = 19/70 (27%), Positives = 37/70 (52%)
Frame = +2
Query: 278 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQER 457
+++++G GK+++L + E + + TIG F S+E K I +WD GQ++
Sbjct: 19 RILMVGLDAAGKTTILYKLKLGEI-VTTIPTIG--FNVESVEY--KNISFTVWDVGGQDK 73
Query: 458 YRAITSAYYR 487
R + Y++
Sbjct: 74 IRPLWRHYFQ 83
>SB_18358| Best HMM Match : Arf (HMM E-Value=0)
Length = 214
Score = 34.7 bits (76), Expect = 0.056
Identities = 23/71 (32%), Positives = 36/71 (50%)
Frame = +2
Query: 275 FKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQE 454
F VV++G GK+S+L R N+F + F +I K I+ ++WD G+E
Sbjct: 22 FHVVMLGLDKSGKTSILYR---NKFREYVNTVPTTAFNVETIR-PFKGIRFKVWDIGGRE 77
Query: 455 RYRAITSAYYR 487
+ R + AY R
Sbjct: 78 QNRPLWKAYAR 88
>SB_56255| Best HMM Match : Arf (HMM E-Value=0)
Length = 181
Score = 34.3 bits (75), Expect = 0.074
Identities = 18/70 (25%), Positives = 36/70 (51%)
Frame = +2
Query: 278 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQER 457
+++++G GK+++L + E + + TIG T V+ K I +WD GQ++
Sbjct: 19 RILMVGLDAAGKTTILYKLKLGEI-VTTIPTIGFNVET----VEYKNISFTVWDVGGQDK 73
Query: 458 YRAITSAYYR 487
R + Y++
Sbjct: 74 IRPLWRHYFQ 83
>SB_22530| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 191
Score = 33.9 bits (74), Expect = 0.097
Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Frame = +2
Query: 266 DYL-FKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDT 442
DY+ K+ ++GD VGK++L N F E T VDG +A ++D+
Sbjct: 3 DYVTLKLYIVGDGAVGKTALFITAATNTFPTEYIPTAYDASEQDFFNVDGIKYQAVLFDS 62
Query: 443 AGQERY 460
AG E +
Sbjct: 63 AGGEDF 68
>SB_52502| Best HMM Match : GTP_CDC (HMM E-Value=1.9e-06)
Length = 101
Score = 33.5 bits (73), Expect = 0.13
Identities = 23/80 (28%), Positives = 40/80 (50%), Gaps = 9/80 (11%)
Frame = +2
Query: 236 NQNGHKKDEYDYLFKVVLIGDSGVGKSSLLSRF-------TRNEFNLES--KSTIGVEFA 388
NQ K + + F ++++G+SG+GKS+L+ R + E K T+ +E +
Sbjct: 12 NQVHRKSVKKGFEFTLMVVGESGLGKSTLIDSLFLTDLYSDRKILSAEERIKKTVKIETS 71
Query: 389 TRSIEVDGKTIKAQIWDTAG 448
T IE G ++ + DT G
Sbjct: 72 TVEIEERGVKLRLTVVDTPG 91
>SB_51370| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 33.5 bits (73), Expect = 0.13
Identities = 18/57 (31%), Positives = 30/57 (52%)
Frame = +2
Query: 281 VVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQ 451
V ++G GVGKS+ R F E + + + S+E+DG+ + + DTAG+
Sbjct: 184 VAVLGKDGVGKSAFTVRALTRRFIGEYDPFLELNYK-HSMEIDGQYLALDVLDTAGK 239
>SB_642| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2229
Score = 33.5 bits (73), Expect = 0.13
Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 2/68 (2%)
Frame = +2
Query: 269 YLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVD--GKTIKAQIWDT 442
Y K++L+G GK++L+ R + + +T G+ ++ D + +IWD
Sbjct: 550 YSMKLMLVGREAQGKTTLMHRLMLDNTYFINSATNGISMEEFRLKKDFLHREFIFKIWDF 609
Query: 443 AGQERYRA 466
GQE Y A
Sbjct: 610 GGQEDYYA 617
>SB_11310| Best HMM Match : Arf (HMM E-Value=0)
Length = 255
Score = 32.7 bits (71), Expect = 0.22
Identities = 18/70 (25%), Positives = 36/70 (51%)
Frame = +2
Query: 278 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQER 457
+++++G GK+++L +E + + TIG V+ K IK +WD GQ++
Sbjct: 92 RLLMVGLDAAGKTTILYHLKLDE-PVNTIPTIGFNVEV----VEYKNIKFTVWDIGGQDK 146
Query: 458 YRAITSAYYR 487
R + Y++
Sbjct: 147 IRLLWRLYFQ 156
>SB_12307| Best HMM Match : Death (HMM E-Value=0.00097)
Length = 1366
Score = 31.9 bits (69), Expect = 0.39
Identities = 16/52 (30%), Positives = 27/52 (51%)
Frame = +2
Query: 269 YLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIK 424
Y +++LIG GK+SL F+ + +ST G+E EVD + ++
Sbjct: 360 YRGRIMLIGQDRAGKTSLKKSLLGLRFDPQEESTEGIEVDPSRFEVDVEQVR 411
>SB_36446| Best HMM Match : GTP_CDC (HMM E-Value=0)
Length = 384
Score = 31.5 bits (68), Expect = 0.52
Identities = 18/63 (28%), Positives = 33/63 (52%)
Frame = +2
Query: 236 NQNGHKKDEYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGK 415
NQ K + + F V+++G+SG+GKS+LL+ + S E +++EV
Sbjct: 12 NQVFRKSVKKGFEFTVMVVGESGLGKSTLLNSLFLTDLYTPSSYPSIKEKLNKTVEVKPC 71
Query: 416 TIK 424
T++
Sbjct: 72 TVE 74
>SB_35222| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 267
Score = 31.1 bits (67), Expect = 0.69
Identities = 18/56 (32%), Positives = 32/56 (57%), Gaps = 2/56 (3%)
Frame = +2
Query: 278 KVVLIGDSGVGKSSLLSR--FTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWD 439
++V++GDS VGK+ LL + + N + + +I + +I VDGK K ++ D
Sbjct: 20 RIVILGDSTVGKTCLLLQLCYKSNTMSRKHLESISNNYVA-NIIVDGKVYKLELCD 74
>SB_45581| Best HMM Match : Ras (HMM E-Value=0.069)
Length = 284
Score = 31.1 bits (67), Expect = 0.69
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = +2
Query: 278 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIG 376
+VV++G GVGKS+L R F E ST+G
Sbjct: 18 RVVVLGQDGVGKSALTVRLLTKRFIGEYDSTLG 50
>SB_1071| Best HMM Match : Ras (HMM E-Value=0)
Length = 228
Score = 31.1 bits (67), Expect = 0.69
Identities = 16/43 (37%), Positives = 24/43 (55%)
Frame = +2
Query: 275 FKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIE 403
+KVV++G GVGKS+L +F +F + TI + T E
Sbjct: 4 YKVVVLGSGGVGKSALTVQFVTGQFVEKYDPTIEDFYHTAGTE 46
>SB_38579| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 117
Score = 30.7 bits (66), Expect = 0.91
Identities = 13/57 (22%), Positives = 32/57 (56%)
Frame = +2
Query: 275 FKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTA 445
+K+ ++GD+ GK+SLL+ +++ +E + T+ E + ++ +WD++
Sbjct: 62 YKLSVVGDAESGKTSLLNALVKSD--IEVEETVIFEECVTDVTSGDSNLEFMLWDSS 116
>SB_34024| Best HMM Match : VLPT (HMM E-Value=3.7)
Length = 368
Score = 30.7 bits (66), Expect = 0.91
Identities = 13/34 (38%), Positives = 22/34 (64%)
Frame = +2
Query: 275 FKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIG 376
+ +V++G +GVGK++L+ RF F E T+G
Sbjct: 325 YSMVVLGAAGVGKTALVVRFVTGRFLNEYDPTLG 358
>SB_7861| Best HMM Match : MMR_HSR1 (HMM E-Value=0.96)
Length = 244
Score = 30.7 bits (66), Expect = 0.91
Identities = 17/56 (30%), Positives = 28/56 (50%)
Frame = +2
Query: 275 FKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDT 442
FK+ ++G S VGK+SL+ + F E TI ++ ++ DG + DT
Sbjct: 188 FKMAILGGSAVGKTSLMRALFKKPFTNEHIPTID-DYIIHALNQDGVHYNVCLVDT 242
>SB_15869| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1420
Score = 30.3 bits (65), Expect = 1.2
Identities = 17/52 (32%), Positives = 25/52 (48%)
Frame = +2
Query: 269 YLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIK 424
Y +++LIG GK+SL F+ ST G+E + EVD +K
Sbjct: 358 YRGRIMLIGQDRAGKTSLKKSLLGLPFDPREVSTEGIEVDPSTFEVDIDQVK 409
>SB_9680| Best HMM Match : Ank (HMM E-Value=4e-20)
Length = 1243
Score = 29.9 bits (64), Expect = 1.6
Identities = 22/79 (27%), Positives = 35/79 (44%), Gaps = 13/79 (16%)
Frame = +2
Query: 269 YLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVD------------- 409
Y K++++G G GK++LL+ + ST+G+ S+++
Sbjct: 665 YRMKLMVVGIQGYGKTTLLAALKGQPLP-SNLSTVGIVVDEWSVQISTSLLSRIGITSGI 723
Query: 410 GKTIKAQIWDTAGQERYRA 466
G TI WD AGQ Y A
Sbjct: 724 GPTITLSTWDLAGQSVYYA 742
>SB_51788| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 414
Score = 29.9 bits (64), Expect = 1.6
Identities = 10/18 (55%), Positives = 18/18 (100%)
Frame = +2
Query: 278 KVVLIGDSGVGKSSLLSR 331
K+VL+GD+G+GKS+L+++
Sbjct: 7 KLVLVGDAGIGKSTLIAK 24
>SB_20133| Best HMM Match : Extensin_2 (HMM E-Value=2.1)
Length = 762
Score = 29.1 bits (62), Expect = 2.8
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +1
Query: 418 HKSSDMGHGRPGAVPRHHVGVLPRR 492
H+S G G P A+ HHV +P+R
Sbjct: 533 HESRPQGSGSPSAIKAHHVLCVPQR 557
>SB_11841| Best HMM Match : Ras (HMM E-Value=0)
Length = 523
Score = 29.1 bits (62), Expect = 2.8
Identities = 17/39 (43%), Positives = 18/39 (46%), Gaps = 1/39 (2%)
Frame = +2
Query: 374 GVEFATRSIEVDGKT-IKAQIWDTAGQERYRAITSAYYR 487
GV S GK K I DTAGQE Y A+ Y R
Sbjct: 261 GVGHRAHSYSKGGKNKSKTDILDTAGQEEYSAMRDQYMR 299
>SB_10158| Best HMM Match : MMR_HSR1 (HMM E-Value=9.4e-08)
Length = 340
Score = 29.1 bits (62), Expect = 2.8
Identities = 19/60 (31%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
Frame = +2
Query: 275 FKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVD--GKTIKAQIWDTAG 448
FKV+++G +GVGKS L++ E+ +E + +T S G+T + +WD+ G
Sbjct: 61 FKVIVVGRTGVGKSHLVNTL-MGEYVVEEGQDLDPCTSTVSKHEKRIGRT-RVTVWDSPG 118
>SB_43575| Best HMM Match : Sina (HMM E-Value=0)
Length = 432
Score = 29.1 bits (62), Expect = 2.8
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = +2
Query: 437 DTAGQERYRAITSAYYRGAWA 499
DTAG+E+Y ++S Y RGA A
Sbjct: 278 DTAGEEKYAGLSSFYCRGASA 298
>SB_16073| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 238
Score = 29.1 bits (62), Expect = 2.8
Identities = 22/76 (28%), Positives = 37/76 (48%), Gaps = 10/76 (13%)
Frame = +2
Query: 266 DYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKS----TIGVEFATRSIEVDGKTI---- 421
DY K++ IG G GK+S + NLE+++ G+ AT ++ +D +
Sbjct: 2 DY-HKLLFIGPVGAGKTSAIRALCDEHHNLETEAKASDITGLRKATTTVAMDYGCLTLSD 60
Query: 422 --KAQIWDTAGQERYR 463
Q++ T GQ R+R
Sbjct: 61 GEAVQLYGTPGQARFR 76
>SB_15868| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1103
Score = 29.1 bits (62), Expect = 2.8
Identities = 16/47 (34%), Positives = 23/47 (48%)
Frame = +2
Query: 269 YLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVD 409
Y +++LIG GK+SL F+ ST G+E + EVD
Sbjct: 289 YRGRIMLIGQDRAGKTSLKKSLFGIPFDPSEVSTEGIEVDPSTFEVD 335
>SB_57342| Best HMM Match : Arf (HMM E-Value=0)
Length = 457
Score = 28.7 bits (61), Expect = 3.7
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +2
Query: 413 KTIKAQIWDTAGQERYRAITSAYYRGA 493
K I +WD GQ++ R + Y++GA
Sbjct: 152 KNITFSVWDIGGQDKIRRLWRHYFQGA 178
>SB_53088| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 204
Score = 28.7 bits (61), Expect = 3.7
Identities = 16/47 (34%), Positives = 23/47 (48%)
Frame = +2
Query: 269 YLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVD 409
Y +++LIG GK+SL F+ ST G+E + EVD
Sbjct: 80 YRGRIMLIGQDRAGKTSLKKSLLGIPFDPGEVSTEGIEVDPSTFEVD 126
>SB_37124| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 60
Score = 28.3 bits (60), Expect = 4.8
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +2
Query: 278 KVVLIGDSGVGKSSLLSRFTRNEFN 352
KVVL+G GK+SL+ R+ + FN
Sbjct: 29 KVVLLGKEYSGKTSLVERYLHHRFN 53
>SB_15207| Best HMM Match : Arf (HMM E-Value=1.9e-05)
Length = 259
Score = 27.9 bits (59), Expect = 6.4
Identities = 12/39 (30%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = +2
Query: 371 IGVEFATRSIE-VDGKTIKAQIWDTAGQERYRAITSAYY 484
+G++ A ++E V+ +++K IWD G ++ R + YY
Sbjct: 216 LGLDGAGFNVETVEHRSLKFTIWDVGGLQKLRPLWRHYY 254
>SB_17523| Best HMM Match : MMR_HSR1 (HMM E-Value=4.2)
Length = 87
Score = 27.5 bits (58), Expect = 8.5
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +2
Query: 272 LFKVVLIGDSGVGKSSLLSRFTRNEF 349
L+KVV G GVGK+SL R +F
Sbjct: 27 LYKVVFAGFRGVGKTSLFLRIRDEKF 52
>SB_35038| Best HMM Match : Ras (HMM E-Value=6.8e-13)
Length = 322
Score = 27.5 bits (58), Expect = 8.5
Identities = 16/56 (28%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Frame = +2
Query: 278 KVVLIGDSGVGKSSLLSRFTRN--EFNLESKSTIGVEFATRSIEVDGKTIKAQIWD 439
KV++ GDS VGKS+L+ F + + T+G E + + + T +W+
Sbjct: 7 KVLVTGDSCVGKSALVQVFQSDGTHYPKNYTQTVGAEVLVKLVNIPETT--DSVWE 60
>SB_27378| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 230
Score = 27.5 bits (58), Expect = 8.5
Identities = 14/39 (35%), Positives = 16/39 (41%)
Frame = +2
Query: 413 KTIKAQIWDTAGQERYRAITSAYYRGAWARCWLRHRQAP 529
KT+ Q W QE AI + Y W W RQ P
Sbjct: 95 KTLAQQYWRLIRQEPCLAILATYSTRPWPSNWRLIRQEP 133
>SB_7886| Best HMM Match : Cbl_N3 (HMM E-Value=4.9)
Length = 667
Score = 27.5 bits (58), Expect = 8.5
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +2
Query: 230 RINQNGHKKDEYDYLFKVVLIGDSGVGKSSLLSRFTRN 343
R +N KD KVV+ G++GVGKS F ++
Sbjct: 584 RNQRNADMKDTSADAIKVVVFGEAGVGKSVPSQTFVKS 621
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,776,016
Number of Sequences: 59808
Number of extensions: 314330
Number of successful extensions: 1058
Number of sequences better than 10.0: 95
Number of HSP's better than 10.0 without gapping: 846
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1038
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1397989795
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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