Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20407
         (757 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    27   0.21 
AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450 ...    22   4.6  
AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    22   4.6  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 26.6 bits (56), Expect = 0.21
 Identities = 13/43 (30%), Positives = 24/43 (55%)
 Frame = +1

Query: 73  TLHVLFFI*IYHTSSLHSVFPHTFSLRTPTPTHIIFIHLYYYC 201
           T+H+L  + IY+   +H +F   F + T     ++ I+ Y+YC
Sbjct: 249 TVHLLLLVCIYYFYYMHLLFCCAFIIFTMHLLFLLCIY-YFYC 290


>AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 491

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 12/39 (30%), Positives = 22/39 (56%)
 Frame = +2

Query: 98  RSIIHHHCIQSSLTHSR*GRQLQLTLYSFIYIIIAKKRK 214
           R  IH+  I S     R  +++  +L+SF   +IA+++K
Sbjct: 216 RPWIHNETIYSLTPQGRKEQKVLKSLHSFSNNVIAERKK 254


>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 13/43 (30%), Positives = 20/43 (46%)
 Frame = +1

Query: 424 LFCTLMYSNNNENL*YLTA*CYNIL*ISIDFLV*TDQIVS*IV 552
           L   L Y+N N    +L   C N+  ++I F   T ++   IV
Sbjct: 42  LLTNLTYNNTNRKYYWLNVCCLNLSIVTIFFNFATKKLEQFIV 84


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 169,856
Number of Sequences: 336
Number of extensions: 3510
Number of successful extensions: 11
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20234955
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)