Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20407
         (757 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL032632-9|CAA21588.2| 1464|Caenorhabditis elegans Hypothetical ...    29   3.6  
AL023856-5|CAC15865.2|  343|Caenorhabditis elegans Hypothetical ...    29   3.6  
Z54237-9|CAA90991.1| 1424|Caenorhabditis elegans Hypothetical pr...    29   4.7  
Z54237-8|CAE52902.1|  771|Caenorhabditis elegans Hypothetical pr...    29   4.7  
Z54235-11|CAA90978.1| 1424|Caenorhabditis elegans Hypothetical p...    29   4.7  
Z54235-10|CAE52905.1|  771|Caenorhabditis elegans Hypothetical p...    29   4.7  
AF000196-10|AAC24250.1|  172|Caenorhabditis elegans Hypothetical...    28   6.2  

>AL032632-9|CAA21588.2| 1464|Caenorhabditis elegans Hypothetical
           protein Y11D7A.14 protein.
          Length = 1464

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 10/24 (41%), Positives = 19/24 (79%)
 Frame = +3

Query: 168 SHYIHSFILLLQKNVKLFSVQRTL 239
           ++YI SFI+L+Q N++  ++Q+ L
Sbjct: 759 NNYISSFIILIQANIRYLNIQKDL 782


>AL023856-5|CAC15865.2|  343|Caenorhabditis elegans Hypothetical
           protein Y94A7B.8 protein.
          Length = 343

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 13/20 (65%), Positives = 14/20 (70%)
 Frame = +3

Query: 84  PFFYLDLSYIITAFSLPSHI 143
           PF Y    YII+AFSLP HI
Sbjct: 9   PFVYSMCFYIISAFSLPIHI 28


>Z54237-9|CAA90991.1| 1424|Caenorhabditis elegans Hypothetical protein
            T11B7.4d protein.
          Length = 1424

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 12/20 (60%), Positives = 13/20 (65%)
 Frame = +1

Query: 109  TSSLHSVFPHTFSLRTPTPT 168
            T SLH V    +SLR PTPT
Sbjct: 1134 TQSLHDVLDEFYSLRKPTPT 1153


>Z54237-8|CAE52902.1|  771|Caenorhabditis elegans Hypothetical
           protein T11B7.4c protein.
          Length = 771

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 12/20 (60%), Positives = 13/20 (65%)
 Frame = +1

Query: 109 TSSLHSVFPHTFSLRTPTPT 168
           T SLH V    +SLR PTPT
Sbjct: 481 TQSLHDVLDEFYSLRKPTPT 500


>Z54235-11|CAA90978.1| 1424|Caenorhabditis elegans Hypothetical
            protein T11B7.4d protein.
          Length = 1424

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 12/20 (60%), Positives = 13/20 (65%)
 Frame = +1

Query: 109  TSSLHSVFPHTFSLRTPTPT 168
            T SLH V    +SLR PTPT
Sbjct: 1134 TQSLHDVLDEFYSLRKPTPT 1153


>Z54235-10|CAE52905.1|  771|Caenorhabditis elegans Hypothetical
           protein T11B7.4c protein.
          Length = 771

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 12/20 (60%), Positives = 13/20 (65%)
 Frame = +1

Query: 109 TSSLHSVFPHTFSLRTPTPT 168
           T SLH V    +SLR PTPT
Sbjct: 481 TQSLHDVLDEFYSLRKPTPT 500


>AF000196-10|AAC24250.1|  172|Caenorhabditis elegans Hypothetical
           protein B0041.1 protein.
          Length = 172

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 22/59 (37%), Positives = 31/59 (52%)
 Frame = +3

Query: 69  FDAACPFFYLDLSYIITAFSLPSHILVKDANSNSHYIHSFILLLQKNVKLFSVQRTLGL 245
           F+ AC +F L  + II   SL S  L      NS +I S + + +KN+ +FS    LGL
Sbjct: 109 FEIAC-YFILHWASIIFNQSLSSIKLSYHFGMNS-FIDSLLSIFKKNLNIFSKIGGLGL 165


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,780,637
Number of Sequences: 27780
Number of extensions: 311829
Number of successful extensions: 563
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 556
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 562
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1798543458
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)