Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20406
         (581 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           25   1.8  
AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase pr...    24   4.1  

>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 25.0 bits (52), Expect = 1.8
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = +3

Query: 321 EVCLLAGTHVTT*HQQCVHGVNEFALLLKF 410
           E+  +AGT + + H   +HG   +  LLKF
Sbjct: 268 ELLAVAGTELGSPHMTDIHGATVYNNLLKF 297


>AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase
           protein.
          Length = 1253

 Score = 23.8 bits (49), Expect = 4.1
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = +2

Query: 119 HSVFPHTFSLRTPTPTHIIFIHLYYYCKK 205
           H +FP + ++   T THI+  +L Y   K
Sbjct: 22  HEIFPTSNAIIWTTVTHILCAYLCYIFSK 50


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 568,771
Number of Sequences: 2352
Number of extensions: 11471
Number of successful extensions: 16
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 55506924
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)