Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20405
(680 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 36 0.007
SPBC12C2.10c |pst1|SPBC21D10.01c|Clr6 histone deacetylase comple... 31 0.15
SPBC19G7.08c |||arrestin|Schizosaccharomyces pombe|chr 2|||Manual 31 0.20
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 30 0.27
SPBC2A9.04c |||sir antagonist ortholog |Schizosaccharomyces pomb... 30 0.36
SPBC317.01 |mbx2|pvg4|MADS-box transcription factor Pvg4|Schizos... 29 0.47
SPCC23B6.04c |||sec14 cytosolic factor family|Schizosaccharomyce... 29 0.47
SPBC19C7.05 |||cell wall organization protein |Schizosaccharomyc... 29 0.62
SPBC12C2.03c |||FAD binding protein |Schizosaccharomyces pombe|c... 29 0.62
SPAC16C9.04c |||CCR4-Not complex subunit Mot2 |Schizosaccharomyc... 29 0.62
SPBC29B5.01 |atf1|mts1, sss1, gad7|transcription factor Atf1|Sch... 29 0.82
SPBC800.09 |sum2||G2/M transition checkpoint protein Sum2|Schizo... 29 0.82
SPBC1734.16c |pst3||SIN3 family co-repressor|Schizosaccharomyces... 28 1.1
SPCC70.10 |||sequence orphan|Schizosaccharomyces pombe|chr 3|||M... 28 1.4
SPCC622.15c |||sequence orphan|Schizosaccharomyces pombe|chr 3||... 27 1.9
SPCC1620.14c |snf22|SPCC830.01c|ATP-dependent DNA helicase Snf22... 27 2.5
SPAC26A3.10 |||Arf GAP protein|Schizosaccharomyces pombe|chr 1||... 27 2.5
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 27 2.5
SPBC6B1.02 |ppk30||Ark1/Prk1 family protein kinase Ppk30|Schizos... 27 3.3
SPCC584.15c |||arrestin/PY protein 2|Schizosaccharomyces pombe|c... 27 3.3
SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31 |Schizo... 26 4.4
SPBC25B2.07c |mug164||microtubule-associated protein|Schizosacch... 26 4.4
SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase Y|Schizosacch... 26 5.8
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 26 5.8
SPBC2F12.05c |||sterol binding ankyrin repeat protein|Schizosacc... 26 5.8
SPBC354.05c |sre2||membrane-tethered transcription factor |Schiz... 26 5.8
SPBC23E6.09 |ssn6||transcriptional corepressor Ssn6|Schizosaccha... 26 5.8
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 26 5.8
SPCC18B5.08c |||isoleucine-tRNA ligase|Schizosaccharomyces pombe... 26 5.8
SPAC17C9.12 |||MSP domain|Schizosaccharomyces pombe|chr 1|||Manual 26 5.8
SPBC887.10 |mcs4||two-component response regulator |Schizosaccha... 25 7.7
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 35.5 bits (78), Expect = 0.007
Identities = 20/50 (40%), Positives = 22/50 (44%)
Frame = +3
Query: 87 PPLHAPXARVTSHQTPEAPLPTHSAPESRAPPHHAPSIPLHPLDSRVPPH 236
PP AP S P P+PT AP AP APS+ P S PH
Sbjct: 1212 PPSTAPPVPTPSAGLPPVPVPTAKAPPVPAPSSEAPSVST-PRSSVPSPH 1260
Score = 31.1 bits (67), Expect = 0.15
Identities = 20/56 (35%), Positives = 25/56 (44%), Gaps = 2/56 (3%)
Frame = +3
Query: 72 PESQVPPLHAPXARVTSHQTPEAPLPTHSAPESRAPPHHAPS--IPLHPLDSRVPP 233
P PP+ AP + + P A +P P S APP PS +P P S PP
Sbjct: 1164 PSVAAPPVPAPSSGIPPVPKPAAGVPP-VPPPSEAPPVPKPSVGVPPVPPPSTAPP 1218
Score = 29.1 bits (62), Expect = 0.62
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +3
Query: 69 IPESQVPPLHAPXARVTSHQTPEAPLPTHSAPESRAPP 182
+P ++ PP+ AP + S TP + +P +P S A P
Sbjct: 1231 VPTAKAPPVPAPSSEAPSVSTPRSSVP---SPHSNASP 1265
Score = 27.5 bits (58), Expect = 1.9
Identities = 18/58 (31%), Positives = 26/58 (44%), Gaps = 1/58 (1%)
Frame = +2
Query: 305 IPPHHLESRIPPVPSPHGPGFNPARLSVSPANQSMQTTKSRSPSAG-PRPSTPGSEAS 475
+PP S PPVP+P G P + + A + S +PS PR S P ++
Sbjct: 1207 VPPVPPPSTAPPVPTP-SAGLPPVPVPTAKA-PPVPAPSSEAPSVSTPRSSVPSPHSN 1262
Score = 27.1 bits (57), Expect = 2.5
Identities = 26/93 (27%), Positives = 37/93 (39%), Gaps = 2/93 (2%)
Frame = +2
Query: 200 TAPSARLAGSTASLRLSRSPHSMNSRVSLHAMDSRIPPHHLESRIPPVPSPHG--PGFNP 373
TAP + ST + S S + ++ + A S IP S PPVP+P G P P
Sbjct: 1039 TAPPVPIPTSTPPVPKSSSG-APSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKP 1097
Query: 374 ARLSVSPANQSMQTTKSRSPSAGPRPSTPGSEA 472
+ + S+ +PS P P A
Sbjct: 1098 SVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAA 1130
Score = 26.2 bits (55), Expect = 4.4
Identities = 24/75 (32%), Positives = 30/75 (40%), Gaps = 2/75 (2%)
Frame = +3
Query: 15 SRIPAHHAPDSSRVSSHHIPESQVPPL-HAPXARVTSHQTPEAPLPTHSAPESRAPPHHA 191
S P H P S S + S PL P S + P PLP+ + APP
Sbjct: 984 SEPPKDHPP--SAPLSKPVSTSPAAPLARVPPVPKLSSKAPPVPLPS-----ADAPPIPV 1036
Query: 192 PS-IPLHPLDSRVPP 233
PS P P+ + PP
Sbjct: 1037 PSTAPPVPIPTSTPP 1051
>SPBC12C2.10c |pst1|SPBC21D10.01c|Clr6 histone deacetylase complex
subunit Pst1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1522
Score = 31.1 bits (67), Expect = 0.15
Identities = 20/58 (34%), Positives = 25/58 (43%)
Frame = +2
Query: 224 GSTASLRLSRSPHSMNSRVSLHAMDSRIPPHHLESRIPPVPSPHGPGFNPARLSVSPA 397
GST L + S SMN + S + PP + P PSP P + P SV A
Sbjct: 289 GSTTPLPAAASYTSMNMKQSSASHPVLQPPAPSTLQFNPSPSPAAPSYPPVDASVKQA 346
Score = 29.5 bits (63), Expect = 0.47
Identities = 20/52 (38%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
Frame = +2
Query: 326 SRIPPVPSPHGPGFNPARLSVSPAN--QSMQTTKSRSPSAGPRPSTPGSEAS 475
S++PP P P N +S SPA + T S + S PRP T S AS
Sbjct: 109 SQLPPPPQPQSHP-NVTVISASPARAIEQQPTILSSTDSNIPRPGTVKSSAS 159
>SPBC19G7.08c |||arrestin|Schizosaccharomyces pombe|chr 2|||Manual
Length = 483
Score = 30.7 bits (66), Expect = 0.20
Identities = 22/76 (28%), Positives = 36/76 (47%), Gaps = 5/76 (6%)
Frame = +2
Query: 227 STASLRLSRSPHSMNSR--VSLHAMDSRIPPHHLESRI-PPVPSPHGPGFNPARLSVSPA 397
S + L + P S+ S V +A D P H +R PP+P PH P + + + P
Sbjct: 110 SISDLSIKSPPPSLTSDWIVDSYASDQDNPSVHTHNRTTPPIPPPHLPNASGSSVYQPPY 169
Query: 398 N--QSMQTTKSRSPSA 439
+S+ TT S + ++
Sbjct: 170 TPFRSVSTTSSSNDTS 185
Score = 25.4 bits (53), Expect = 7.7
Identities = 14/44 (31%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Frame = +3
Query: 42 DSSRVSSHHIPESQVPPLHAPXARVTS-HQTPEAPLPTHSAPES 170
D+ V +H+ +PP H P A +S +Q P P + S S
Sbjct: 137 DNPSVHTHNRTTPPIPPPHLPNASGSSVYQPPYTPFRSVSTTSS 180
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 30.3 bits (65), Expect = 0.27
Identities = 17/49 (34%), Positives = 21/49 (42%), Gaps = 1/49 (2%)
Frame = +3
Query: 90 PLHAPXARVTSHQTPEAPLPTHSAPE-SRAPPHHAPSIPLHPLDSRVPP 233
P+ P R S P+ PT P S PP AP +P P + PP
Sbjct: 1686 PVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPP 1734
Score = 29.5 bits (63), Expect = 0.47
Identities = 22/72 (30%), Positives = 30/72 (41%), Gaps = 5/72 (6%)
Frame = +3
Query: 15 SRIPAHHAPDSSRVSSHHIPESQVPPLHAPXARVTSHQTPEAPLPT----HSAPESRAPP 182
S IP+ S V+ P S +PP + A V S P P+ SAP + P
Sbjct: 1496 SMIPSVAQQPPSSVAPATAPSSTLPPSQSSFAHVPSPAPPAPQHPSAAALSSAPADNSMP 1555
Query: 183 HH-APSIPLHPL 215
H +P P P+
Sbjct: 1556 HRSSPYAPQEPV 1567
Score = 26.2 bits (55), Expect = 4.4
Identities = 14/36 (38%), Positives = 14/36 (38%)
Frame = +3
Query: 72 PESQVPPLHAPXARVTSHQTPEAPLPTHSAPESRAP 179
P S PP AP P PLP SAP P
Sbjct: 1711 PMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVPNP 1746
>SPBC2A9.04c |||sir antagonist ortholog |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 741
Score = 29.9 bits (64), Expect = 0.36
Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 4/60 (6%)
Frame = +3
Query: 78 SQVPPLHAPXARVTSHQTPEAPLPTHSA----PESRAPPHHAPSIPLHPLDSRVPPHLLD 245
S +P + +TS+ T + T+S P S P +AP+ P+ P S PP+LL+
Sbjct: 303 SSMPDRPSSNEPMTSNLTSNSGSMTNSTSTDLPTSNLPSQNAPARPVEPSPSIQPPNLLN 362
>SPBC317.01 |mbx2|pvg4|MADS-box transcription factor
Pvg4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 372
Score = 29.5 bits (63), Expect = 0.47
Identities = 22/83 (26%), Positives = 35/83 (42%), Gaps = 1/83 (1%)
Frame = +3
Query: 9 ADSRIPAHHAPDSSRVS-SHHIPESQVPPLHAPXARVTSHQTPEAPLPTHSAPESRAPPH 185
+DS++ +P +S + + P+ Q P + P P H P +R PPH
Sbjct: 119 SDSQLDTGDSPATSETTVQDYNPQVQSYCRPEPLSSNHVRSCPPFPPTQHHHPHTR-PPH 177
Query: 186 HAPSIPLHPLDSRVPPHLLDSRV 254
H P H ++ PP+ S V
Sbjct: 178 HPPHPHFHN-NNYPPPYCFQSPV 199
>SPCC23B6.04c |||sec14 cytosolic factor family|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1008
Score = 29.5 bits (63), Expect = 0.47
Identities = 15/40 (37%), Positives = 18/40 (45%), Gaps = 1/40 (2%)
Frame = +3
Query: 117 TSHQTPEAPLPTHSAPESRAPPHHAPSIPLHPLDSR-VPP 233
T TP PLPT ++P+ PH P R VPP
Sbjct: 416 TQSSTPRKPLPTTTSPKVNPEPHSESISDTRPSTPRKVPP 455
>SPBC19C7.05 |||cell wall organization protein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 150
Score = 29.1 bits (62), Expect = 0.62
Identities = 20/55 (36%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Frame = +3
Query: 72 PESQVPPLHA-PXARVTSHQTPEAPLPTHSAPESRAPPHHAPSIPLHPLDSRVPP 233
P + PP A P AR S T P+P S R PP P++P + S PP
Sbjct: 75 PLTAPPPYTAEPEARYNS--TIHNPMPPMSQAY-RPPPTEPPTVPAYETSSEFPP 126
>SPBC12C2.03c |||FAD binding protein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 571
Score = 29.1 bits (62), Expect = 0.62
Identities = 21/60 (35%), Positives = 27/60 (45%), Gaps = 1/60 (1%)
Frame = +3
Query: 81 QVPPLHAPXARVTSHQTPEAP-LPTHSAPESRAPPHHAPSIPLHPLDSRVPPHLLDSRVL 257
+VP H + + E P HS P SR PPH+ + HP S P +LD R L
Sbjct: 93 KVPENHVSLIDIDEARAKEDPNFQIHSTP-SRMPPHY---VQPHPPFSVFPAPILDVREL 148
>SPAC16C9.04c |||CCR4-Not complex subunit Mot2 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 489
Score = 29.1 bits (62), Expect = 0.62
Identities = 19/75 (25%), Positives = 29/75 (38%), Gaps = 2/75 (2%)
Frame = +3
Query: 15 SRIPAHHAPDSSRVSSHHIP--ESQVPPLHAPXARVTSHQTPEAPLPTHSAPESRAPPHH 188
++ P A S + HI + P + + T++ P P SA P H
Sbjct: 274 TKTPLEEANSSPAAQNQHITTVDHVHPQVSMTPSLSTNNTATSVPAPYSSAASVNVVPGH 333
Query: 189 APSIPLHPLDSRVPP 233
A +I H S +PP
Sbjct: 334 ATTILHHEESSALPP 348
>SPBC29B5.01 |atf1|mts1, sss1, gad7|transcription factor
Atf1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 566
Score = 28.7 bits (61), Expect = 0.82
Identities = 17/46 (36%), Positives = 24/46 (52%)
Frame = +2
Query: 224 GSTASLRLSRSPHSMNSRVSLHAMDSRIPPHHLESRIPPVPSPHGP 361
GSTAS+ + S+N SL + S +PP + +PPV S P
Sbjct: 98 GSTASV--GQGNPSLNRNPSLSNIPSGVPPAFARTLLPPVSSIASP 141
>SPBC800.09 |sum2||G2/M transition checkpoint protein
Sum2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 426
Score = 28.7 bits (61), Expect = 0.82
Identities = 15/37 (40%), Positives = 18/37 (48%)
Frame = +2
Query: 335 PPVPSPHGPGFNPARLSVSPANQSMQTTKSRSPSAGP 445
PP +P P P +S SP+ QSM T P A P
Sbjct: 211 PPNFAPGMPAPGPTAVSASPSLQSMPPTNGVIPGAQP 247
Score = 25.4 bits (53), Expect = 7.7
Identities = 15/61 (24%), Positives = 27/61 (44%)
Frame = +3
Query: 21 IPAHHAPDSSRVSSHHIPESQVPPLHAPXARVTSHQTPEAPLPTHSAPESRAPPHHAPSI 200
+P + APD ++ Q P ++ + Q P P + P ++ PP+ AP +
Sbjct: 166 VPYYGAPDQQQMG-------QRPEFAQNVSQGFAGQAPYNVRPGYGMPSNQKPPNFAPGM 218
Query: 201 P 203
P
Sbjct: 219 P 219
>SPBC1734.16c |pst3||SIN3 family co-repressor|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1154
Score = 28.3 bits (60), Expect = 1.1
Identities = 13/33 (39%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Frame = +2
Query: 380 LSVSPANQSMQTTKSRSPS-AGPRPSTPGSEAS 475
L V+P+N+ +T +S SP+ + P+PS P +S
Sbjct: 214 LPVAPSNEDQRTMESTSPTDSQPQPSAPNLVSS 246
>SPCC70.10 |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 155
Score = 27.9 bits (59), Expect = 1.4
Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 5/65 (7%)
Frame = +3
Query: 15 SRIPAHHAPDSSRVSSHHIPESQVPPLHAPXARVTSHQTPEA-PLPT----HSAPESRAP 179
+ + AH P+++ S ++PE +VPP ++P A ++ EA P T H P S P
Sbjct: 90 THVMAH--PNTTTTVSENLPE-EVPPPYSPAATASNTPQNEASPAATEAVNHERPASPPP 146
Query: 180 PHHAP 194
+ P
Sbjct: 147 VYRPP 151
>SPCC622.15c |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 557
Score = 27.5 bits (58), Expect = 1.9
Identities = 24/75 (32%), Positives = 31/75 (41%), Gaps = 4/75 (5%)
Frame = +3
Query: 24 PAHHAPDSSRVSSHHIPESQVPPLHAPXARVTSHQTPEAPLPTHSAPESRAPPHHAPSIP 203
P H RVS IP SQ P L P ++ PLP P + P +P++
Sbjct: 266 PRLHQNKVLRVS---IPGSQ-PALVTPKHKMNVPPMGMYPLPFSPLPSAAPPIPFSPNVS 321
Query: 204 LHP----LDSRVPPH 236
HP L + VP H
Sbjct: 322 SHPHMAFLPATVPTH 336
>SPCC1620.14c |snf22|SPCC830.01c|ATP-dependent DNA helicase
Snf22|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1680
Score = 27.1 bits (57), Expect = 2.5
Identities = 19/49 (38%), Positives = 22/49 (44%)
Frame = +2
Query: 311 PHHLESRIPPVPSPHGPGFNPARLSVSPANQSMQTTKSRSPSAGPRPST 457
PH ++SR P V + AR PAN SMQ R S PST
Sbjct: 238 PHTVQSRAPSVDTTSSSHSFSARNI--PANVSMQQQMGRRGSIPVNPST 284
>SPAC26A3.10 |||Arf GAP protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 923
Score = 27.1 bits (57), Expect = 2.5
Identities = 13/32 (40%), Positives = 18/32 (56%), Gaps = 3/32 (9%)
Frame = +3
Query: 144 LPTHSAPESRAPPHH---APSIPLHPLDSRVP 230
+ T P+S APP +PS PLH + S +P
Sbjct: 459 IQTSGRPKSMAPPSPSPISPSFPLHEIQSPMP 490
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 27.1 bits (57), Expect = 2.5
Identities = 29/91 (31%), Positives = 37/91 (40%), Gaps = 1/91 (1%)
Frame = +2
Query: 203 APSARLAGSTASLRLSRSPHSMNSRVSLHAMDSRIPPHHLESRIPPVPSPHGPGFNPARL 382
AP + A T L R P S R S+ P + S+ PP+PS P PA
Sbjct: 123 APPSAPAPPTPQSEL-RPPTSAPPRPSIPPPSPASAPP-IPSKAPPIPSSLPPPAQPAAP 180
Query: 383 SVSPANQSMQTTKSRSPSAGPR-PSTPGSEA 472
SP S + S P P+ P P S+A
Sbjct: 181 VKSP--PSAPSLPSAVPPMPPKVPPPPLSQA 209
>SPBC6B1.02 |ppk30||Ark1/Prk1 family protein kinase
Ppk30|Schizosaccharomyces pombe|chr 2|||Manual
Length = 953
Score = 26.6 bits (56), Expect = 3.3
Identities = 20/84 (23%), Positives = 37/84 (44%), Gaps = 4/84 (4%)
Frame = +3
Query: 15 SRIPAHHAPD--SSRVSSHHIPESQVPPLHAPXARVTSHQTPEAPLPTHSAPESRAPPHH 188
S +P + P S S +I +Q+ P+ + V + P++P+P + +
Sbjct: 384 SNVPPVNRPSLKSKSPSVSNILSNQLSPISSANNDVMARLQPKSPIPATKSYSATIQTPR 443
Query: 189 APSIPLHPLDSRV--PPHLLDSRV 254
+PS+ S + PHL D+ V
Sbjct: 444 SPSLRRADSTSHIIKVPHLPDTSV 467
>SPCC584.15c |||arrestin/PY protein 2|Schizosaccharomyces pombe|chr
3|||Manual
Length = 594
Score = 26.6 bits (56), Expect = 3.3
Identities = 14/50 (28%), Positives = 21/50 (42%)
Frame = +3
Query: 75 ESQVPPLHAPXARVTSHQTPEAPLPTHSAPESRAPPHHAPSIPLHPLDSR 224
E+ P + S+ T AP P + P AP +P HP+ +R
Sbjct: 531 EATRPSSPTESVEIPSNTTTIAPSPVPTIIAPALPSTPAPPLPSHPMATR 580
>SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1224
Score = 26.2 bits (55), Expect = 4.4
Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Frame = +2
Query: 308 PPHHLESRIPPVPSPHGPGFNPARLSVSPANQSMQTTK-SRSPSAGP-RPSTPGSEAS 475
PP +R+PPV P P NP V+P + ++ S SP+ P P TP + AS
Sbjct: 937 PPTASGTRVPPVQQPSHP--NP-YTPVAPQSPVAAASRISSSPNMPPSNPYTPIAVAS 991
>SPBC25B2.07c |mug164||microtubule-associated
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 501
Score = 26.2 bits (55), Expect = 4.4
Identities = 26/93 (27%), Positives = 40/93 (43%), Gaps = 8/93 (8%)
Frame = +2
Query: 206 PSARLAGSTASLRLSRSPHSMNSRVSLH--AMDSRIPP-----HHLESRIPPVPSPHGPG 364
PS RL ST+ RLS + + SLH ++ S+ P H+ + P S
Sbjct: 105 PSQRLRPSTSLARLSNNAPRIPKEASLHENSISSKESPSVTTSKHVATITKPSTSSIARM 164
Query: 365 FNPARLSVSPANQSMQTTKSRSP-SAGPRPSTP 460
+ AR++ P +S +S S GP +P
Sbjct: 165 SSNARIAAIPRAKSSMAVRSPSRLGNGPNVRSP 197
>SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase
Y|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1002
Score = 25.8 bits (54), Expect = 5.8
Identities = 17/57 (29%), Positives = 21/57 (36%), Gaps = 2/57 (3%)
Frame = +3
Query: 24 PAHHAPDSSRVSS--HHIPESQVPPLHAPXARVTSHQTPEAPLPTHSAPESRAPPHH 188
P HH P HH P +PP + H+ PE H PE + HH
Sbjct: 315 PMHHEPGEHMPPPPMHHEPGEHMPPPPFKHHELEEHEGPE----HHRGPEDK--EHH 365
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 25.8 bits (54), Expect = 5.8
Identities = 21/65 (32%), Positives = 25/65 (38%), Gaps = 2/65 (3%)
Frame = +3
Query: 15 SRIPAHHAPDSSRVSSHHI--PESQVPPLHAPXARVTSHQTPEAPLPTHSAPESRAPPHH 188
S PA P +S V++ + P S V P S Q P A P S P PP
Sbjct: 140 SSAPASQEPSASGVNAPTVSAPNSMVSP-------PPSFQPPSAAAPATSLPSDYNPPPP 192
Query: 189 APSIP 203
P P
Sbjct: 193 PPPPP 197
Score = 25.4 bits (53), Expect = 7.7
Identities = 17/52 (32%), Positives = 18/52 (34%)
Frame = +3
Query: 78 SQVPPLHAPXARVTSHQTPEAPLPTHSAPESRAPPHHAPSIPLHPLDSRVPP 233
S P P A + T AP S P S PP A P D PP
Sbjct: 140 SSAPASQEPSASGVNAPTVSAPNSMVSPPPSFQPPSAAAPATSLPSDYNPPP 191
>SPBC2F12.05c |||sterol binding ankyrin repeat
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1310
Score = 25.8 bits (54), Expect = 5.8
Identities = 22/80 (27%), Positives = 31/80 (38%)
Frame = +2
Query: 224 GSTASLRLSRSPHSMNSRVSLHAMDSRIPPHHLESRIPPVPSPHGPGFNPARLSVSPANQ 403
GS S + S H + SL + S + HH + IP G AR P+ Q
Sbjct: 646 GSIPSKQPSDEQHL--GKESLPSQQSTVSNHHRKESIPSKQPTEG---QHARQESLPSQQ 700
Query: 404 SMQTTKSRSPSAGPRPSTPG 463
+ +T R S + T G
Sbjct: 701 TTETKHLRKESTPSKQPTEG 720
>SPBC354.05c |sre2||membrane-tethered transcription factor
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 793
Score = 25.8 bits (54), Expect = 5.8
Identities = 12/36 (33%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = +3
Query: 132 PEAPLPTHSAPESRAPPHHAPSIPLHPLDS-RVPPH 236
P+AP HS P++ + P + P+DS + PH
Sbjct: 567 PDAPHNCHSVPQNSSYPRPPMQVNRSPIDSMQTIPH 602
>SPBC23E6.09 |ssn6||transcriptional corepressor
Ssn6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1102
Score = 25.8 bits (54), Expect = 5.8
Identities = 19/59 (32%), Positives = 24/59 (40%), Gaps = 8/59 (13%)
Frame = +3
Query: 72 PESQVPPLHAPXARVTSHQTPEAPLPTHSAPESRA--------PPHHAPSIPLHPLDSR 224
P P H ++V S P A LP +A + PP H P LHPL S+
Sbjct: 11 PSQNAQPNHGMGSKVLSSD-PNASLPPQTAYYASPLHANSVSLPPSHLPRSTLHPLLSQ 68
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 25.8 bits (54), Expect = 5.8
Identities = 18/45 (40%), Positives = 19/45 (42%)
Frame = +3
Query: 69 IPESQVPPLHAPXARVTSHQTPEAPLPTHSAPESRAPPHHAPSIP 203
IP P L P + TP P P S P S APP PS P
Sbjct: 395 IPGRSAPAL-PPLGNASRTSTPPVPTPP-SLPPS-APPSLPPSAP 436
>SPCC18B5.08c |||isoleucine-tRNA ligase|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 973
Score = 25.8 bits (54), Expect = 5.8
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +1
Query: 406 HADHKIEESLRGA*TLDPWIGS 471
H D++ +E +RG TLD W S
Sbjct: 540 HPDYRNKEYIRGTETLDVWFDS 561
>SPAC17C9.12 |||MSP domain|Schizosaccharomyces pombe|chr 1|||Manual
Length = 319
Score = 25.8 bits (54), Expect = 5.8
Identities = 17/51 (33%), Positives = 21/51 (41%)
Frame = +3
Query: 45 SSRVSSHHIPESQVPPLHAPXARVTSHQTPEAPLPTHSAPESRAPPHHAPS 197
S + +P + P+ AP T H LP SA S PH APS
Sbjct: 165 SKGIDGTALPSTHANPVAAPSTATTQH----TQLPKTSAV-SHQKPHEAPS 210
>SPBC887.10 |mcs4||two-component response regulator
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 522
Score = 25.4 bits (53), Expect = 7.7
Identities = 14/37 (37%), Positives = 16/37 (43%)
Frame = +2
Query: 350 PHGPGFNPARLSVSPANQSMQTTKSRSPSAGPRPSTP 460
PHG FN A L SP +S S+ STP
Sbjct: 82 PHGQDFNDALLVASPDTSVALRYRSSQLSSSTFESTP 118
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,528,944
Number of Sequences: 5004
Number of extensions: 51442
Number of successful extensions: 255
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 193
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 245
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 313902888
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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