Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20400
         (514 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At3g59140.1 68416.m06593 ABC transporter family protein putative...    27   5.6  
At5g58820.1 68418.m07370 subtilase family protein contains simil...    27   9.8  

>At3g59140.1 68416.m06593 ABC transporter family protein putative
            multi resistance protein mrp - Arabidopsis thaliana,
            EMBL:ATMRPPROT
          Length = 1453

 Score = 27.5 bits (58), Expect = 5.6
 Identities = 12/36 (33%), Positives = 18/36 (50%)
 Frame = +2

Query: 59   CLTTEKICVVFVYSESSGILFKNVKQTSLRVLVSVY 166
            CL    +CVV +  +SS  LF  +  +  R  +S Y
Sbjct: 942  CLMVRSVCVVIMCMKSSASLFSQLLNSLFRAPMSFY 977


>At5g58820.1 68418.m07370 subtilase family protein contains
           similarity to prepro-cucumisin GI:807698 from [Cucumis
           melo]
          Length = 703

 Score = 26.6 bits (56), Expect = 9.8
 Identities = 11/38 (28%), Positives = 21/38 (55%)
 Frame = -2

Query: 174 ISL*TDTRTRNEVCLTFLKSIPELSEYTKTTHIFSVVR 61
           +S   D     +V + ++ S+P L EYT  +H  S+++
Sbjct: 17  VSAVIDDPQNKQVYVVYMGSLPSLLEYTPLSHHMSILQ 54


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,735,055
Number of Sequences: 28952
Number of extensions: 248400
Number of successful extensions: 477
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 470
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 477
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 927799552
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)