Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20397
         (800 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    24   1.2  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    22   6.5  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    22   6.5  
AY052395-1|AAL15469.1|   76|Tribolium castaneum tryptophan oxyge...    21   8.7  
AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan oxyge...    21   8.7  
AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan oxyge...    21   8.7  

>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 10/31 (32%), Positives = 17/31 (54%)
 Frame = -3

Query: 237 CCVNKVAYGKFSNYLLSPLTFLSNVSTYEHT 145
           C +N + Y       L+ L F  ++STYE++
Sbjct: 377 CDINSIQYFCLMARCLNTLIFYYHISTYEYS 407


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -1

Query: 569 KDILLINPKIRFYN 528
           KDI+ INP +++ N
Sbjct: 10  KDIVFINPLVKYLN 23


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 8/25 (32%), Positives = 13/25 (52%)
 Frame = +3

Query: 693 KNSICLKCL*HICDASINSLNKTYI 767
           KN +CL  L  +CD  +    K+ +
Sbjct: 262 KNFVCLLSLIILCDCVVKEAQKSLV 286


>AY052395-1|AAL15469.1|   76|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 76

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 7/23 (30%), Positives = 14/23 (60%)
 Frame = -3

Query: 153 EHTFVVYNNKYMLFFSSMNFRIN 85
           EH F+V +  Y L+F  + + ++
Sbjct: 51  EHLFIVTHQAYELWFKQIIYELD 73


>AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 7/23 (30%), Positives = 14/23 (60%)
 Frame = -3

Query: 153 EHTFVVYNNKYMLFFSSMNFRIN 85
           EH F+V +  Y L+F  + + ++
Sbjct: 51  EHLFIVTHQAYELWFKQIIYELD 73


>AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 7/23 (30%), Positives = 14/23 (60%)
 Frame = -3

Query: 153 EHTFVVYNNKYMLFFSSMNFRIN 85
           EH F+V +  Y L+F  + + ++
Sbjct: 51  EHLFIVTHQAYELWFKQIIYELD 73


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 180,060
Number of Sequences: 336
Number of extensions: 3880
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21791490
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)