Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20396
(626 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF125546-1|ABL73930.1| 237|Tribolium castaneum obstractor C2 pr... 30 0.018
EF125545-1|ABL73929.1| 274|Tribolium castaneum obstractor C1 pr... 30 0.018
DQ659247-1|ABG47445.1| 980|Tribolium castaneum chitinase 7 prot... 29 0.032
EF125547-1|ABL73931.1| 255|Tribolium castaneum obstractor D pro... 28 0.074
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro... 26 0.22
AF442747-1|AAL40947.1| 669|Tribolium castaneum ABC transmembran... 24 0.91
AF422804-1|AAL56571.1| 669|Tribolium castaneum ABC transmembran... 24 0.91
AY600513-1|AAT11861.1| 314|Tribolium castaneum spalt-like prote... 24 1.2
EF125544-1|ABL73928.1| 279|Tribolium castaneum obstractor B pro... 23 2.1
EU019711-1|ABU25223.1| 534|Tribolium castaneum chitin deacetyla... 21 6.4
>EF125546-1|ABL73930.1| 237|Tribolium castaneum obstractor C2
protein.
Length = 237
Score = 29.9 bits (64), Expect = 0.018
Identities = 12/41 (29%), Positives = 18/41 (43%)
Frame = +1
Query: 364 VSNPACEGKRAQVP*PLSCNSFLNCWDGWSFEQDCPKGFMF 486
+S+P CE C+ F NCW+G + C G +
Sbjct: 90 ISSPHCERLYGIFADESKCDVFWNCWNGEASRYQCSPGLAY 130
>EF125545-1|ABL73929.1| 274|Tribolium castaneum obstractor C1
protein.
Length = 274
Score = 29.9 bits (64), Expect = 0.018
Identities = 12/41 (29%), Positives = 18/41 (43%)
Frame = +1
Query: 364 VSNPACEGKRAQVP*PLSCNSFLNCWDGWSFEQDCPKGFMF 486
+S+P CE C+ F NCW+G + C G +
Sbjct: 90 ISSPHCERLYGIFADESKCDVFWNCWNGEASRYQCSPGLAY 130
>DQ659247-1|ABG47445.1| 980|Tribolium castaneum chitinase 7 protein.
Length = 980
Score = 29.1 bits (62), Expect = 0.032
Identities = 20/73 (27%), Positives = 28/73 (38%), Gaps = 3/73 (4%)
Frame = +1
Query: 298 KIEYDPLYQQELIINP--KKDPAIVSNPACEGKRAQVP*PLSCNSFLNCWDGWSFEQDCP 471
K+EYD Y+ + KDP V+ EG + P C + C CP
Sbjct: 889 KLEYDGPYETSISSGQYTTKDPNEVTCDEEEGHISYHPDKADCRMYYMCEGERKHHMPCP 948
Query: 472 KGFMFSGD-GYCD 507
+F+ D CD
Sbjct: 949 SNLVFNPDQNVCD 961
>EF125547-1|ABL73931.1| 255|Tribolium castaneum obstractor D
protein.
Length = 255
Score = 27.9 bits (59), Expect = 0.074
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = +1
Query: 415 SCNSFLNCWDGWSFEQDCPKGFMFS 489
SC + CW+G + EQ C G +++
Sbjct: 111 SCTRYWTCWNGTATEQLCIGGLLYN 135
Score = 27.1 bits (57), Expect = 0.13
Identities = 12/38 (31%), Positives = 18/38 (47%)
Frame = +1
Query: 379 CEGKRAQVP*PLSCNSFLNCWDGWSFEQDCPKGFMFSG 492
C+ K V C+ + C +G DCP G +F+G
Sbjct: 29 CKLKSKVVGDETYCDRYWECVNGQQELYDCPNGLVFAG 66
Score = 27.1 bits (57), Expect = 0.13
Identities = 14/49 (28%), Positives = 20/49 (40%), Gaps = 1/49 (2%)
Frame = +1
Query: 343 PKKDPAIVSNPAC-EGKRAQVP*PLSCNSFLNCWDGWSFEQDCPKGFMF 486
P+ +P C + VP SCN + C G+ Q CP +F
Sbjct: 144 PENVDGCQKHPLCNDDPNGNVPLGKSCNRYWQCQGGYPRLQRCPAMLVF 192
>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
Length = 2700
Score = 26.2 bits (55), Expect = 0.22
Identities = 14/50 (28%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Frame = +1
Query: 415 SCNSFLNCWDGWSFEQDCPKGFMFSGDGY-CDSLKTLTAIFGLQVNLKYR 561
SC+SF C +G Q+C G ++ + + CD + + Q+ KY+
Sbjct: 1217 SCSSFYVCVNGHLVPQNCAPGLHYNPEEHMCDWKYKVKCVGRKQLAQKYQ 1266
>AF442747-1|AAL40947.1| 669|Tribolium castaneum ABC transmembrane
transporter protein.
Length = 669
Score = 24.2 bits (50), Expect = 0.91
Identities = 18/53 (33%), Positives = 23/53 (43%), Gaps = 7/53 (13%)
Frame = -1
Query: 548 FTWSPNIAVNVFSESQ*PSPENMNP-------LGQSCSKDQPSQQLRKLLHDK 411
F SP A F E + P P N NP L K++ S+Q L+ DK
Sbjct: 300 FLGSPEEAETFFRELEAPCPRNYNPADYFIQLLAIVPEKEESSRQAVNLICDK 352
>AF422804-1|AAL56571.1| 669|Tribolium castaneum ABC transmembrane
transporter white protein.
Length = 669
Score = 24.2 bits (50), Expect = 0.91
Identities = 18/53 (33%), Positives = 23/53 (43%), Gaps = 7/53 (13%)
Frame = -1
Query: 548 FTWSPNIAVNVFSESQ*PSPENMNP-------LGQSCSKDQPSQQLRKLLHDK 411
F SP A F E + P P N NP L K++ S+Q L+ DK
Sbjct: 300 FLGSPEEAETFFRELEAPCPRNYNPADYFIQLLAIVPEKEESSRQAVNLICDK 352
>AY600513-1|AAT11861.1| 314|Tribolium castaneum spalt-like protein
protein.
Length = 314
Score = 23.8 bits (49), Expect = 1.2
Identities = 9/13 (69%), Positives = 11/13 (84%)
Frame = +1
Query: 334 IINPKKDPAIVSN 372
+I+P KDPAI SN
Sbjct: 81 VIDPAKDPAIYSN 93
>EF125544-1|ABL73928.1| 279|Tribolium castaneum obstractor B
protein.
Length = 279
Score = 23.0 bits (47), Expect = 2.1
Identities = 11/33 (33%), Positives = 15/33 (45%), Gaps = 1/33 (3%)
Frame = +1
Query: 409 PLSCNSFLNCWDGWSFEQDCPKGFMFSGD-GYC 504
P C+ F C DG CP G +++ G C
Sbjct: 119 PHICDKFYYCVDGKYNMITCPNGLVYNDKAGIC 151
>EU019711-1|ABU25223.1| 534|Tribolium castaneum chitin deacetylase
1 protein.
Length = 534
Score = 21.4 bits (43), Expect = 6.4
Identities = 7/13 (53%), Positives = 8/13 (61%)
Frame = +1
Query: 466 CPKGFMFSGDGYC 504
CP G + GDG C
Sbjct: 117 CPDGSLACGDGNC 129
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 137,303
Number of Sequences: 336
Number of extensions: 2883
Number of successful extensions: 15
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16083914
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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