Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20396
         (626 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC103695-1|AAI03696.1|  466|Homo sapiens chitinase 1 (chitotrios...    38   0.029
U29615-1|AAC50246.1|  466|Homo sapiens chitotriosidase precursor...    38   0.038
BC105682-1|AAI05683.1|  466|Homo sapiens chitinase 1 (chitotrios...    38   0.038
BC105681-1|AAI05682.1|  466|Homo sapiens chitinase 1 (chitotrios...    38   0.038
BC105680-1|AAI05681.1|  466|Homo sapiens chitinase 1 (chitotrios...    38   0.038
BC069614-1|AAH69614.1|  454|Homo sapiens CHIT1 protein protein.        38   0.038
X82540-1|CAA57890.1|  352|Homo sapiens activin beta-C chain prot...    30   5.8  
BC130326-1|AAI30327.1|  352|Homo sapiens inhibin, beta C protein.      30   5.8  
BC130324-1|AAI30325.1|  352|Homo sapiens inhibin, beta C protein.      30   5.8  
BC001237-1|AAH01237.1|  513|Homo sapiens ZNF395 protein protein.       30   5.8  
AK023418-1|BAB14571.1|  513|Homo sapiens protein ( Homo sapiens ...    30   5.8  
AK002050-1|BAA92056.1|  513|Homo sapiens protein ( Homo sapiens ...    30   5.8  
AF263928-1|AAF73463.1|  513|Homo sapiens papillomavirus regulato...    30   5.8  
AB073627-1|BAD29734.1|  513|Homo sapiens HD regulating facor-2 p...    30   5.8  
AB044750-1|BAA96783.1|  496|Homo sapiens zinc finger protein pro...    30   5.8  
U18244-1|AAA75314.1|  564|Homo sapiens excitatory amino acid tra...    30   7.7  
AC004659-3|AAC15754.1|  564|Homo sapiens EAT4_HUMAN protein.           30   7.7  

>BC103695-1|AAI03696.1|  466|Homo sapiens chitinase 1
           (chitotriosidase) protein.
          Length = 466

 Score = 37.9 bits (84), Expect = 0.029
 Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
 Frame = +1

Query: 343 PKKDPAIVSNPACEGKRAQV-P*PLSCNSFLNCWDGWSFEQDCPKGFMFSGDGYC 504
           P+  P+   +  C+GK   + P P   +SF +C  G  F+Q CP G +FS    C
Sbjct: 408 PEHGPSPGQDTFCQGKADGLYPNPRERSSFYSCAGGRLFQQSCPTGLVFSNSCKC 462


>U29615-1|AAC50246.1|  466|Homo sapiens chitotriosidase precursor
           protein.
          Length = 466

 Score = 37.5 bits (83), Expect = 0.038
 Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
 Frame = +1

Query: 343 PKKDPAIVSNPACEGKRAQV-P*PLSCNSFLNCWDGWSFEQDCPKGFMFSGDGYC 504
           P+  P+   +  C+GK   + P P   +SF +C  G  F+Q CP G +FS    C
Sbjct: 408 PEHGPSPGQDTFCQGKADGLYPNPRERSSFYSCAAGRLFQQSCPTGLVFSNSCKC 462


>BC105682-1|AAI05683.1|  466|Homo sapiens chitinase 1
           (chitotriosidase) protein.
          Length = 466

 Score = 37.5 bits (83), Expect = 0.038
 Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
 Frame = +1

Query: 343 PKKDPAIVSNPACEGKRAQV-P*PLSCNSFLNCWDGWSFEQDCPKGFMFSGDGYC 504
           P+  P+   +  C+GK   + P P   +SF +C  G  F+Q CP G +FS    C
Sbjct: 408 PEHGPSPGQDTFCQGKADGLYPNPRERSSFYSCAAGRLFQQSCPTGLVFSNSCKC 462


>BC105681-1|AAI05682.1|  466|Homo sapiens chitinase 1
           (chitotriosidase) protein.
          Length = 466

 Score = 37.5 bits (83), Expect = 0.038
 Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
 Frame = +1

Query: 343 PKKDPAIVSNPACEGKRAQV-P*PLSCNSFLNCWDGWSFEQDCPKGFMFSGDGYC 504
           P+  P+   +  C+GK   + P P   +SF +C  G  F+Q CP G +FS    C
Sbjct: 408 PEHGPSPGQDTFCQGKADGLYPNPRERSSFYSCAAGRLFQQSCPTGLVFSNSCKC 462


>BC105680-1|AAI05681.1|  466|Homo sapiens chitinase 1
           (chitotriosidase) protein.
          Length = 466

 Score = 37.5 bits (83), Expect = 0.038
 Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
 Frame = +1

Query: 343 PKKDPAIVSNPACEGKRAQV-P*PLSCNSFLNCWDGWSFEQDCPKGFMFSGDGYC 504
           P+  P+   +  C+GK   + P P   +SF +C  G  F+Q CP G +FS    C
Sbjct: 408 PEHGPSPGQDTFCQGKADGLYPNPRERSSFYSCAAGRLFQQSCPTGLVFSNSCKC 462


>BC069614-1|AAH69614.1|  454|Homo sapiens CHIT1 protein protein.
          Length = 454

 Score = 37.5 bits (83), Expect = 0.038
 Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
 Frame = +1

Query: 343 PKKDPAIVSNPACEGKRAQV-P*PLSCNSFLNCWDGWSFEQDCPKGFMFSGDGYC 504
           P+  P+   +  C+GK   + P P   +SF +C  G  F+Q CP G +FS    C
Sbjct: 396 PEHGPSPGQDTFCQGKADGLYPNPRERSSFYSCAAGRLFQQSCPTGLVFSNSCKC 450


>X82540-1|CAA57890.1|  352|Homo sapiens activin beta-C chain
           protein.
          Length = 352

 Score = 30.3 bits (65), Expect = 5.8
 Identities = 13/26 (50%), Positives = 15/26 (57%)
 Frame = +2

Query: 68  GGCSSQTDGRQKRLLFYDEDGNLVKT 145
           G C   T  R   LL+YD D N+VKT
Sbjct: 314 GSCCVPTARRPLSLLYYDRDSNIVKT 339


>BC130326-1|AAI30327.1|  352|Homo sapiens inhibin, beta C protein.
          Length = 352

 Score = 30.3 bits (65), Expect = 5.8
 Identities = 13/26 (50%), Positives = 15/26 (57%)
 Frame = +2

Query: 68  GGCSSQTDGRQKRLLFYDEDGNLVKT 145
           G C   T  R   LL+YD D N+VKT
Sbjct: 314 GSCCVPTARRPLSLLYYDRDSNIVKT 339


>BC130324-1|AAI30325.1|  352|Homo sapiens inhibin, beta C protein.
          Length = 352

 Score = 30.3 bits (65), Expect = 5.8
 Identities = 13/26 (50%), Positives = 15/26 (57%)
 Frame = +2

Query: 68  GGCSSQTDGRQKRLLFYDEDGNLVKT 145
           G C   T  R   LL+YD D N+VKT
Sbjct: 314 GSCCVPTARRPLSLLYYDRDSNIVKT 339


>BC001237-1|AAH01237.1|  513|Homo sapiens ZNF395 protein protein.
          Length = 513

 Score = 30.3 bits (65), Expect = 5.8
 Identities = 15/33 (45%), Positives = 19/33 (57%)
 Frame = +1

Query: 211 PQSFLRIYSDLA*QLLPAFAIPVSNEIIQKIEY 309
           P SF  I +D A Q LP+F IPVS  I   + +
Sbjct: 398 PGSFWHIQADHAYQALPSFQIPVSPHIYTSVSW 430


>AK023418-1|BAB14571.1|  513|Homo sapiens protein ( Homo sapiens
           cDNA FLJ13356 fis, clone PLACE1000050. ).
          Length = 513

 Score = 30.3 bits (65), Expect = 5.8
 Identities = 15/33 (45%), Positives = 19/33 (57%)
 Frame = +1

Query: 211 PQSFLRIYSDLA*QLLPAFAIPVSNEIIQKIEY 309
           P SF  I +D A Q LP+F IPVS  I   + +
Sbjct: 398 PGSFWHIQADHAYQALPSFQIPVSPHIYTSVSW 430


>AK002050-1|BAA92056.1|  513|Homo sapiens protein ( Homo sapiens
           cDNA FLJ11188 fis, clone PLACE1007544. ).
          Length = 513

 Score = 30.3 bits (65), Expect = 5.8
 Identities = 15/33 (45%), Positives = 19/33 (57%)
 Frame = +1

Query: 211 PQSFLRIYSDLA*QLLPAFAIPVSNEIIQKIEY 309
           P SF  I +D A Q LP+F IPVS  I   + +
Sbjct: 398 PGSFWHIQADHAYQALPSFQIPVSPHIYTSVSW 430


>AF263928-1|AAF73463.1|  513|Homo sapiens papillomavirus regulatory
           factor PRF-1 protein.
          Length = 513

 Score = 30.3 bits (65), Expect = 5.8
 Identities = 15/33 (45%), Positives = 19/33 (57%)
 Frame = +1

Query: 211 PQSFLRIYSDLA*QLLPAFAIPVSNEIIQKIEY 309
           P SF  I +D A Q LP+F IPVS  I   + +
Sbjct: 398 PGSFWHIQADHAYQALPSFQIPVSPHIYTSVSW 430


>AB073627-1|BAD29734.1|  513|Homo sapiens HD regulating facor-2
           protein.
          Length = 513

 Score = 30.3 bits (65), Expect = 5.8
 Identities = 15/33 (45%), Positives = 19/33 (57%)
 Frame = +1

Query: 211 PQSFLRIYSDLA*QLLPAFAIPVSNEIIQKIEY 309
           P SF  I +D A Q LP+F IPVS  I   + +
Sbjct: 398 PGSFWHIQADHAYQALPSFQIPVSPHIYTSVSW 430


>AB044750-1|BAA96783.1|  496|Homo sapiens zinc finger protein
           protein.
          Length = 496

 Score = 30.3 bits (65), Expect = 5.8
 Identities = 15/33 (45%), Positives = 19/33 (57%)
 Frame = +1

Query: 211 PQSFLRIYSDLA*QLLPAFAIPVSNEIIQKIEY 309
           P SF  I +D A Q LP+F IPVS  I   + +
Sbjct: 381 PGSFWHIQADHAYQALPSFQIPVSPHIYTSVSW 413


>U18244-1|AAA75314.1|  564|Homo sapiens excitatory amino acid
           transporter 4 protein.
          Length = 564

 Score = 29.9 bits (64), Expect = 7.7
 Identities = 14/40 (35%), Positives = 18/40 (45%)
 Frame = +2

Query: 155 PYLRDLALHADKLPFYGNFLNPFFAFIRTSHSSCCLPLQF 274
           P +  L  H +  PF G  L      + TS SS  LP+ F
Sbjct: 359 PLIYFLVTHRNPFPFIGGMLQALITAMGTSSSSATLPITF 398


>AC004659-3|AAC15754.1|  564|Homo sapiens EAT4_HUMAN protein.
          Length = 564

 Score = 29.9 bits (64), Expect = 7.7
 Identities = 14/40 (35%), Positives = 18/40 (45%)
 Frame = +2

Query: 155 PYLRDLALHADKLPFYGNFLNPFFAFIRTSHSSCCLPLQF 274
           P +  L  H +  PF G  L      + TS SS  LP+ F
Sbjct: 359 PLIYFLVTHRNPFPFIGGMLQALITAMGTSSSSATLPITF 398


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 85,857,756
Number of Sequences: 237096
Number of extensions: 1682159
Number of successful extensions: 7373
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 7234
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7373
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6804036910
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)