Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20386
(822 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC144.09c |sfc2||RNA polymerase III transcription factor TFIII... 70 3e-13
SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyce... 68 1e-12
SPAC6G10.12c |ace2||transcription factor Ace2|Schizosaccharomyce... 63 4e-11
SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces... 56 5e-09
SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces ... 53 4e-08
SPBC1198.04c |zas1||zinc finger protein Zas1|Schizosaccharomyces... 53 6e-08
SPBP4H10.09 |rsv1||transcription factor Rsv1 |Schizosaccharomyce... 50 4e-07
SPAC6F12.02 |rst2||transcription factor Rst2|Schizosaccharomyces... 48 2e-06
SPAC1039.05c |||conserved fungal protein|Schizosaccharomyces pom... 46 5e-06
SPAC11D3.17 |||zinc finger protein|Schizosaccharomyces pombe|chr... 42 8e-05
SPAC144.02 |||transcription factor |Schizosaccharomyces pombe|ch... 41 2e-04
SPAC25B8.19c ||SPAC683.01c|transcription factor, zf-fungal binuc... 38 0.001
SPAC16.05c |sfp1||transcription factor Sfp1 |Schizosaccharomyces... 38 0.002
SPAC1327.01c ||SPAC1783.09c, SPAC18G6.16c|transcription factor, ... 29 1.1
SPCC1682.12c |ubp16||ubiquitin C-terminal hydrolase Ubp16|Schizo... 28 1.4
SPCC550.15c |||ribosome biogenesis protein |Schizosaccharomyces ... 28 1.8
SPAC1B1.01 |||transcription factor Rdp1|Schizosaccharomyces pomb... 27 2.4
SPAP7G5.02c |gua2||GMP synthase [glutamine-hydrolyzing] |Schizos... 27 4.3
SPAC2F7.10 |||palmitoyltransferase |Schizosaccharomyces pombe|ch... 26 5.6
SPAC1399.01c |||purine permease |Schizosaccharomyces pombe|chr 1... 26 5.6
SPCP1E11.03 |mug170||arrestin|Schizosaccharomyces pombe|chr 3|||... 26 7.4
SPBC36.03c |||spermidine family transporter |Schizosaccharomyces... 26 7.4
SPBC839.16 |||C-1-tetrahydrofolate synthase|Schizosaccharomyces ... 26 7.4
SPAC30.04c |abc4||glutathione S-conjugate-exporting ATPase Abc4|... 25 9.8
SPAC57A7.13 |||RNA-binding protein|Schizosaccharomyces pombe|chr... 25 9.8
SPBC4F6.07c |||ATP-dependent RNA helicase Mak5 |Schizosaccharomy... 25 9.8
SPAC19B12.03 |bgs3||1,3-beta-glucan synthase subunit Bgs3|Schizo... 25 9.8
SPAC31A2.12 |||arrestin/PY protein 1|Schizosaccharomyces pombe|c... 25 9.8
>SPAC144.09c |sfc2||RNA polymerase III transcription factor
TFIIIA|Schizosaccharomyces pombe|chr 1|||Manual
Length = 374
Score = 70.1 bits (164), Expect = 3e-13
Identities = 33/85 (38%), Positives = 47/85 (55%), Gaps = 4/85 (4%)
Frame = +3
Query: 534 PCNYCPKSFTQKSGLDQHLRIHTKVKPYRCVI--CSKTFCQSVHLKQHMRTHTNVAPFQC 707
P C K +++ S L+QHLR H+ +P+ C CSK F + HLK H R HTNV PF C
Sbjct: 26 PYEECGKKYSRPSLLEQHLRTHSNERPFVCDYTGCSKAFYRKSHLKIHKRCHTNVKPFSC 85
Query: 708 GI--CEKRYKQSSHLNYHLKTTIRP 776
C+ ++ HL H++ +P
Sbjct: 86 HYDGCDAQFYTQQHLERHIEVHRKP 110
Score = 62.9 bits (146), Expect = 5e-11
Identities = 30/88 (34%), Positives = 46/88 (52%), Gaps = 6/88 (6%)
Frame = +3
Query: 513 HTGDRPYPCNY--CPKSFTQKSGLDQHLRIHTKVKPYRCVI--CSKTFCQSVHLKQHMRT 680
H+ +RP+ C+Y C K+F +KS L H R HT VKP+ C C F HL++H+
Sbjct: 47 HSNERPFVCDYTGCSKAFYRKSHLKIHKRCHTNVKPFSCHYDGCDAQFYTQQHLERHIEV 106
Query: 681 HTNVAPFQCGI--CEKRYKQSSHLNYHL 758
H P+ C C++ + + L H+
Sbjct: 107 HRKPKPYACTWEGCDECFSKHQQLRSHI 134
Score = 58.0 bits (134), Expect = 2e-09
Identities = 28/89 (31%), Positives = 45/89 (50%), Gaps = 7/89 (7%)
Frame = +3
Query: 513 HTGDRPYPCNY--CPKSFTQKSGLDQHLRIHTKVKPYRCVI--CSKTFCQSVHLKQHMRT 680
HT +P+ C+Y C F + L++H+ +H K KPY C C + F + L+ H+
Sbjct: 77 HTNVKPFSCHYDGCDAQFYTQQHLERHIEVHRKPKPYACTWEGCDECFSKHQQLRSHISA 136
Query: 681 -HTNVAPFQCGI--CEKRYKQSSHLNYHL 758
HT++ P+ C CE R+ L H+
Sbjct: 137 CHTHLLPYPCTYQDCELRFATKQKLQNHV 165
Score = 48.0 bits (109), Expect = 2e-06
Identities = 27/86 (31%), Positives = 39/86 (45%), Gaps = 4/86 (4%)
Frame = +3
Query: 513 HTGDRPYPCNY--CPKSFTQKSGLDQHL-RIHTKVKPYRCVICSKTFCQSVHLKQHMRTH 683
HT PYPC Y C F K L H+ R H K+ Y C S + ++ H
Sbjct: 138 HTHLLPYPCTYQDCELRFATKQKLQNHVNRAHEKIISYSCPHESCVGHEGFEKWSQLQNH 197
Query: 684 TNVAPF-QCGICEKRYKQSSHLNYHL 758
A C IC +++K ++HL +H+
Sbjct: 198 IREAHVPSCSICGRQFKTAAHLRHHV 223
Score = 32.7 bits (71), Expect = 0.065
Identities = 17/52 (32%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
Frame = +3
Query: 534 PCNYCPKSFTQKSGLDQHLR-IHTKVKPYRCVICSKTFCQSVHLKQHMRTHT 686
P C KSFT+ S L +H+ IH + C C F L++H+ T
Sbjct: 239 PMEGCKKSFTRSSALKKHISVIHEGNMAFHCDSCGTKFGYKHMLQRHLERGT 290
Score = 31.5 bits (68), Expect = 0.15
Identities = 20/75 (26%), Positives = 34/75 (45%), Gaps = 6/75 (8%)
Frame = +3
Query: 552 KSFTQKSGLDQHLRIHTKVKPYRCVICSKTFCQSVHLKQHMRTHTNV----APFQCGI-- 713
+ F + S L H+R + C IC + F + HL+ H+ H + C +
Sbjct: 186 EGFEKWSQLQNHIR---EAHVPSCSICGRQFKTAAHLRHHVVLHQTTLEERKTYHCPMEG 242
Query: 714 CEKRYKQSSHLNYHL 758
C+K + +SS L H+
Sbjct: 243 CKKSFTRSSALKKHI 257
>SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 681
Score = 68.1 bits (159), Expect = 1e-12
Identities = 27/82 (32%), Positives = 44/82 (53%), Gaps = 2/82 (2%)
Frame = +3
Query: 531 YPCNY--CPKSFTQKSGLDQHLRIHTKVKPYRCVICSKTFCQSVHLKQHMRTHTNVAPFQ 704
Y C + C K FT+ L H+ HT +P++C IC K+F + ++H + HT + F
Sbjct: 570 YVCTFAGCNKRFTRAYNLKSHMNTHTNYRPFQCSICKKSFARQHDKRRHEQLHTGIKAFA 629
Query: 705 CGICEKRYKQSSHLNYHLKTTI 770
C C +R+ + LN H K+ +
Sbjct: 630 CVTCNQRFARMDALNRHYKSEV 651
Score = 52.0 bits (119), Expect = 1e-07
Identities = 19/56 (33%), Positives = 34/56 (60%)
Frame = +3
Query: 513 HTGDRPYPCNYCPKSFTQKSGLDQHLRIHTKVKPYRCVICSKTFCQSVHLKQHMRT 680
HT RP+ C+ C KSF ++ +H ++HT +K + CV C++ F + L +H ++
Sbjct: 594 HTNYRPFQCSICKKSFARQHDKRRHEQLHTGIKAFACVTCNQRFARMDALNRHYKS 649
Score = 37.5 bits (83), Expect = 0.002
Identities = 15/51 (29%), Positives = 26/51 (50%)
Frame = +1
Query: 358 PFNCETCGEGFHDENEYITHTAIGHVKLKPFECNICHKRFTQQGGLMQHMR 510
PF C C + F +++ H + H +K F C C++RF + L +H +
Sbjct: 599 PFQCSICKKSFARQHDKRRHEQL-HTGIKAFACVTCNQRFARMDALNRHYK 648
Score = 30.3 bits (65), Expect = 0.35
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +1
Query: 430 HVKLKPFECNICHKRFTQQGGLMQH 504
H +PF+C+IC K F +Q +H
Sbjct: 594 HTNYRPFQCSICKKSFARQHDKRRH 618
>SPAC6G10.12c |ace2||transcription factor Ace2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 533
Score = 63.3 bits (147), Expect = 4e-11
Identities = 30/85 (35%), Positives = 44/85 (51%), Gaps = 2/85 (2%)
Frame = +3
Query: 522 DRPYPCNY--CPKSFTQKSGLDQHLRIHTKVKPYRCVICSKTFCQSVHLKQHMRTHTNVA 695
D Y C Y C K +K ++ H++ H +PYRC +C F + LK+H+R H N
Sbjct: 440 DGKYVCLYNGCNKRIARKYNVESHIQTHLSDRPYRCDLCKAGFVRHHDLKRHLRIHENGR 499
Query: 696 PFQCGICEKRYKQSSHLNYHLKTTI 770
P+ C C KR+ + LN H + I
Sbjct: 500 PYVCE-CLKRFNRLDALNRHKQRNI 523
Score = 48.4 bits (110), Expect = 1e-06
Identities = 22/55 (40%), Positives = 29/55 (52%)
Frame = +3
Query: 507 EMHTGDRPYPCNYCPKSFTQKSGLDQHLRIHTKVKPYRCVICSKTFCQSVHLKQH 671
+ H DRPY C+ C F + L +HLRIH +PY C C K F + L +H
Sbjct: 465 QTHLSDRPYRCDLCKAGFVRHHDLKRHLRIHENGRPYVCE-CLKRFNRLDALNRH 518
Score = 27.1 bits (57), Expect = 3.2
Identities = 8/27 (29%), Positives = 16/27 (59%)
Frame = +1
Query: 430 HVKLKPFECNICHKRFTQQGGLMQHMR 510
H+ +P+ C++C F + L +H+R
Sbjct: 467 HLSDRPYRCDLCKAGFVRHHDLKRHLR 493
>SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 565
Score = 56.4 bits (130), Expect = 5e-09
Identities = 27/72 (37%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Frame = +3
Query: 480 STGWPHATHEMHTGDRPYPCNYCPKSFTQKSGLDQHLRIHTKVKPYRCVI--CSKTFCQS 653
+TG P + + RPY C C K+F + +H+R HT KP+ C C+K F +S
Sbjct: 9 TTGKPSRSTKNPDAPRPYKCPLCTKAFYRLEHQTRHIRTHTGEKPHVCTFPGCAKRFSRS 68
Query: 654 VHLKQHMRTHTN 689
L +H R HTN
Sbjct: 69 DELTRHARIHTN 80
Score = 49.6 bits (113), Expect = 5e-07
Identities = 20/53 (37%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Frame = +3
Query: 609 KPYRCVICSKTFCQSVHLKQHMRTHTNVAPFQCGI--CEKRYKQSSHLNYHLK 761
+PY+C +C+K F + H +H+RTHT P C C KR+ +S L H +
Sbjct: 24 RPYKCPLCTKAFYRLEHQTRHIRTHTGEKPHVCTFPGCAKRFSRSDELTRHAR 76
Score = 37.1 bits (82), Expect = 0.003
Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
Frame = +3
Query: 513 HTGDRPYPCNY--CPKSFTQKSGLDQHLRIHTKVKPYR 620
HTG++P+ C + C K F++ L +H RIHT R
Sbjct: 48 HTGEKPHVCTFPGCAKRFSRSDELTRHARIHTNANSRR 85
Score = 25.4 bits (53), Expect = 9.8
Identities = 7/23 (30%), Positives = 14/23 (60%)
Frame = +3
Query: 696 PFQCGICEKRYKQSSHLNYHLKT 764
P++C +C K + + H H++T
Sbjct: 25 PYKCPLCTKAFYRLEHQTRHIRT 47
>SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 582
Score = 53.2 bits (122), Expect = 4e-08
Identities = 24/61 (39%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Frame = +3
Query: 519 GDRPYPCNYCPKSFTQKSGLDQHLR-IHTKVKPYRCVICSKTFCQSVHLKQHMRTHTNVA 695
G + + C C K F + L +H+R +HT KP+ C IC K F + +L+QH R H N +
Sbjct: 419 GGKSFVCPECSKKFKRSEHLRRHIRSLHTSEKPFVC-ICGKRFSRRDNLRQHERLHVNAS 477
Query: 696 P 698
P
Sbjct: 478 P 478
Score = 37.9 bits (84), Expect = 0.002
Identities = 23/67 (34%), Positives = 28/67 (41%)
Frame = +1
Query: 361 FNCETCGEGFHDENEYITHTAIGHVKLKPFECNICHKRFTQQGGLMQHMRCIRVTVPTRA 540
F C C + F H H KPF C IC KRF+++ L QH R + V R
Sbjct: 423 FVCPECSKKFKRSEHLRRHIRSLHTSEKPFVC-ICGKRFSRRDNLRQHER-LHVNASPRL 480
Query: 541 ITARSPS 561
PS
Sbjct: 481 ACFFQPS 487
Score = 28.3 bits (60), Expect = 1.4
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = +3
Query: 699 FQCGICEKRYKQSSHLNYHLKT 764
F C C K++K+S HL H+++
Sbjct: 423 FVCPECSKKFKRSEHLRRHIRS 444
>SPBC1198.04c |zas1||zinc finger protein Zas1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 897
Score = 52.8 bits (121), Expect = 6e-08
Identities = 27/73 (36%), Positives = 40/73 (54%), Gaps = 3/73 (4%)
Frame = +3
Query: 552 KSFTQKSGLDQHLRIHTKVKP-YRCVI--CSKTFCQSVHLKQHMRTHTNVAPFQCGICEK 722
+SFT+K L + R H P + C C K+F + HL++H RTH NV F C C +
Sbjct: 5 ESFTEKP-LKKRSRAHRLGDPRFYCTYPDCPKSFTRKEHLRRHERTHENVKAFSCSFCNR 63
Query: 723 RYKQSSHLNYHLK 761
+ +S LN H++
Sbjct: 64 AFARSDVLNRHVQ 76
Score = 52.0 bits (119), Expect = 1e-07
Identities = 23/55 (41%), Positives = 33/55 (60%), Gaps = 2/55 (3%)
Frame = +3
Query: 519 GDRPYPCNY--CPKSFTQKSGLDQHLRIHTKVKPYRCVICSKTFCQSVHLKQHMR 677
GD + C Y CPKSFT+K L +H R H VK + C C++ F +S L +H++
Sbjct: 22 GDPRFYCTYPDCPKSFTRKEHLRRHERTHENVKAFSCSFCNRAFARSDVLNRHVQ 76
Score = 26.6 bits (56), Expect = 4.3
Identities = 11/45 (24%), Positives = 22/45 (48%)
Frame = +1
Query: 376 CGEGFHDENEYITHTAIGHVKLKPFECNICHKRFTQQGGLMQHMR 510
C + F E++ H +K F C+ C++ F + L +H++
Sbjct: 33 CPKSF-TRKEHLRRHERTHENVKAFSCSFCNRAFARSDVLNRHVQ 76
>SPBP4H10.09 |rsv1||transcription factor Rsv1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 428
Score = 50.0 bits (114), Expect = 4e-07
Identities = 20/58 (34%), Positives = 33/58 (56%), Gaps = 2/58 (3%)
Frame = +3
Query: 606 VKPYRCVICSKTFCQSVHLKQHMRTHTNVAPFQCGI--CEKRYKQSSHLNYHLKTTIR 773
+K Y C C + F + H +H+R+HT PF+C C+KR+ + L H++T +R
Sbjct: 1 MKSYECPFCKRVFHRQEHQVRHIRSHTGEKPFECSYPSCKKRFTRRDELIRHVRTHLR 58
Score = 44.4 bits (100), Expect = 2e-05
Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Frame = +3
Query: 525 RPYPCNYCPKSFTQKSGLDQHLRIHTKVKPYRCVI--CSKTFCQSVHLKQHMRTHTNVA 695
+ Y C +C + F ++ +H+R HT KP+ C C K F + L +H+RTH A
Sbjct: 2 KSYECPFCKRVFHRQEHQVRHIRSHTGEKPFECSYPSCKKRFTRRDELIRHVRTHLRKA 60
Score = 43.2 bits (97), Expect = 5e-05
Identities = 25/75 (33%), Positives = 37/75 (49%), Gaps = 3/75 (4%)
Frame = +1
Query: 361 FNCETCGEGFHDENEYITHTAIGHVKLKPFECNI--CHKRFTQQGGLMQHMRC-IRVTVP 531
+ C C FH + + H H KPFEC+ C KRFT++ L++H+R +R +
Sbjct: 4 YECPFCKRVFHRQEHQVRHIR-SHTGEKPFECSYPSCKKRFTRRDELIRHVRTHLRKALV 62
Query: 532 TRAITARSPSPKSPD 576
T T K+PD
Sbjct: 63 TPEQTLDVNLHKAPD 77
Score = 37.9 bits (84), Expect = 0.002
Identities = 14/33 (42%), Positives = 23/33 (69%), Gaps = 2/33 (6%)
Frame = +3
Query: 513 HTGDRPYPCNY--CPKSFTQKSGLDQHLRIHTK 605
HTG++P+ C+Y C K FT++ L +H+R H +
Sbjct: 26 HTGEKPFECSYPSCKKRFTRRDELIRHVRTHLR 58
>SPAC6F12.02 |rst2||transcription factor Rst2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 567
Score = 47.6 bits (108), Expect = 2e-06
Identities = 18/35 (51%), Positives = 24/35 (68%)
Frame = +3
Query: 603 KVKPYRCVICSKTFCQSVHLKQHMRTHTNVAPFQC 707
KVK Y C C++ F + HLK+H+R+HTN PF C
Sbjct: 66 KVKQYVCETCTRAFARLEHLKRHIRSHTNEKPFTC 100
Score = 35.5 bits (78), Expect = 0.009
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +3
Query: 525 RPYPCNYCPKSFTQKSGLDQHLRIHTKVKPYRC 623
+ Y C C ++F + L +H+R HT KP+ C
Sbjct: 68 KQYVCETCTRAFARLEHLKRHIRSHTNEKPFTC 100
>SPAC1039.05c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 781
Score = 46.4 bits (105), Expect = 5e-06
Identities = 22/54 (40%), Positives = 31/54 (57%), Gaps = 2/54 (3%)
Frame = +3
Query: 519 GDRPYPCNY--CPKSFTQKSGLDQHLRIHTKVKPYRCVICSKTFCQSVHLKQHM 674
GD Y C++ C KSFT+K +H R HT K + C CS +F +S L +H+
Sbjct: 13 GDIRYKCDFQGCTKSFTRKEHARRHFRSHTNSKAFICPHCSSSFTRSDVLNRHV 66
Score = 43.2 bits (97), Expect = 5e-05
Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
Frame = +3
Query: 615 YRCVI--CSKTFCQSVHLKQHMRTHTNVAPFQCGICEKRYKQSSHLNYHL 758
Y+C C+K+F + H ++H R+HTN F C C + +S LN H+
Sbjct: 17 YKCDFQGCTKSFTRKEHARRHFRSHTNSKAFICPHCSSSFTRSDVLNRHV 66
Score = 27.9 bits (59), Expect = 1.8
Identities = 9/26 (34%), Positives = 16/26 (61%)
Frame = +3
Query: 513 HTGDRPYPCNYCPKSFTQKSGLDQHL 590
HT + + C +C SFT+ L++H+
Sbjct: 41 HTNSKAFICPHCSSSFTRSDVLNRHV 66
>SPAC11D3.17 |||zinc finger protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 585
Score = 42.3 bits (95), Expect = 8e-05
Identities = 18/55 (32%), Positives = 28/55 (50%)
Frame = +3
Query: 525 RPYPCNYCPKSFTQKSGLDQHLRIHTKVKPYRCVICSKTFCQSVHLKQHMRTHTN 689
R +PC+ C K FT+ L +H H+K +P C C + LK+H++ N
Sbjct: 29 RVFPCDQCAKRFTRHENLTRHKACHSKAEPIPCPYCEIKCKRKDLLKRHIQRFHN 83
Score = 35.5 bits (78), Expect = 0.009
Identities = 14/49 (28%), Positives = 24/49 (48%)
Frame = +3
Query: 615 YRCVICSKTFCQSVHLKQHMRTHTNVAPFQCGICEKRYKQSSHLNYHLK 761
+ C C+K F + +L +H H+ P C CE + K+ L H++
Sbjct: 31 FPCDQCAKRFTRHENLTRHKACHSKAEPIPCPYCEIKCKRKDLLKRHIQ 79
Score = 27.5 bits (58), Expect = 2.4
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +1
Query: 448 FECNICHKRFTQQGGLMQHMRC 513
F C+ C KRFT+ L +H C
Sbjct: 31 FPCDQCAKRFTRHENLTRHKAC 52
>SPAC144.02 |||transcription factor |Schizosaccharomyces pombe|chr
1|||Manual
Length = 249
Score = 40.7 bits (91), Expect = 2e-04
Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 9/65 (13%)
Frame = +3
Query: 513 HTGDR--PYPCNY--CPKSF---TQKSGLDQHLRIHTKVKPYRCVI--CSKTFCQSVHLK 665
H G+R Y C + CP+ T + L HLR HT KP+ C + C ++F +S L
Sbjct: 65 HIGNRRPKYTCEWDDCPRKGMVQTSRFALVAHLRSHTGEKPFICSVPECDRSFTRSDALA 124
Query: 666 QHMRT 680
+HMRT
Sbjct: 125 KHMRT 129
Score = 32.7 bits (71), Expect = 0.065
Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 7/49 (14%)
Frame = +3
Query: 660 LKQHMRTHTNVAPFQCGI--CEKRYKQSSHLNYHLKT-----TIRPI*P 785
L H+R+HT PF C + C++ + +S L H++T T+RP P
Sbjct: 93 LVAHLRSHTGEKPFICSVPECDRSFTRSDALAKHMRTVHEADTLRPSDP 141
Score = 29.1 bits (62), Expect = 0.80
Identities = 12/31 (38%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
Frame = +1
Query: 430 HVKLKPFECNI--CHKRFTQQGGLMQHMRCI 516
H KPF C++ C + FT+ L +HMR +
Sbjct: 100 HTGEKPFICSVPECDRSFTRSDALAKHMRTV 130
>SPAC25B8.19c ||SPAC683.01c|transcription factor, zf-fungal
binuclear cluster type |Schizosaccharomyces pombe|chr
1|||Manual
Length = 522
Score = 38.3 bits (85), Expect = 0.001
Identities = 15/31 (48%), Positives = 22/31 (70%), Gaps = 2/31 (6%)
Frame = +3
Query: 513 HTGDRPYPCNY--CPKSFTQKSGLDQHLRIH 599
HTG+RP+ C+Y C K+F +S + +H RIH
Sbjct: 490 HTGERPFVCDYAGCGKAFNVRSNMRRHQRIH 520
Score = 36.7 bits (81), Expect = 0.004
Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
Frame = +3
Query: 531 YPCNYCPKSFTQKSGLDQHLRIHTKVKPYRC--VICSKTFCQSVHLKQHMRTH 683
Y C C + F++ S L H HT +P+ C C K F ++++H R H
Sbjct: 468 YRCTECLQGFSRPSSLKIHTYSHTGERPFVCDYAGCGKAFNVRSNMRRHQRIH 520
Score = 35.1 bits (77), Expect = 0.012
Identities = 17/49 (34%), Positives = 23/49 (46%), Gaps = 2/49 (4%)
Frame = +3
Query: 615 YRCVICSKTFCQSVHLKQHMRTHTNVAPFQCGI--CEKRYKQSSHLNYH 755
YRC C + F + LK H +HT PF C C K + S++ H
Sbjct: 468 YRCTECLQGFSRPSSLKIHTYSHTGERPFVCDYAGCGKAFNVRSNMRRH 516
>SPAC16.05c |sfp1||transcription factor Sfp1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 442
Score = 37.9 bits (84), Expect = 0.002
Identities = 25/80 (31%), Positives = 37/80 (46%), Gaps = 2/80 (2%)
Frame = +3
Query: 522 DRPYPCNY--CPKSFTQKSGLDQHLRIHTKVKPYRCVICSKTFCQSVHLKQHMRTHTNVA 695
D+PY C C K++ ++GL H ++H P I + T H Q
Sbjct: 347 DKPYKCPVPNCDKAYKNQNGLKYH-KLHGHCSP----ITTPTPAPIPH--QGFVVENK-- 397
Query: 696 PFQCGICEKRYKQSSHLNYH 755
P++C +C KRYK + L YH
Sbjct: 398 PYRCEVCSKRYKNLNGLKYH 417
Score = 29.5 bits (63), Expect = 0.60
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +1
Query: 433 VKLKPFECNICHKRFTQQGGLMQH 504
V+ KP+ C +C KR+ GL H
Sbjct: 394 VENKPYRCEVCSKRYKNLNGLKYH 417
>SPAC1327.01c ||SPAC1783.09c, SPAC18G6.16c|transcription factor,
zf-fungal binuclear cluster type |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 977
Score = 28.7 bits (61), Expect = 1.1
Identities = 13/37 (35%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Frame = +3
Query: 648 QSVHLK-QHMRTHTNVAPFQCGICEKRYKQSSHLNYH 755
Q +HL Q+ H NVA ++Y Q +H+N H
Sbjct: 120 QQLHLNHQYQHQHKNVAANSIDNLSRQYSQPNHINTH 156
>SPCC1682.12c |ubp16||ubiquitin C-terminal hydrolase
Ubp16|Schizosaccharomyces pombe|chr 3|||Manual
Length = 457
Score = 28.3 bits (60), Expect = 1.4
Identities = 18/69 (26%), Positives = 27/69 (39%)
Frame = +1
Query: 259 EYSLHHRDEHTKRRKGIRCQVCEKPMSVDAVQFPFNCETCGEGFHDENEYITHTAIGHVK 438
E S+ HR R+ I C VC+KP + + + G D ++ H A K
Sbjct: 243 ETSVVHRIFGGYLRQQILCSVCKKPSNTYQALLDLSVDAKGSSLADSLKHFVH-AEKLTK 301
Query: 439 LKPFECNIC 465
+ C C
Sbjct: 302 QNKYRCENC 310
>SPCC550.15c |||ribosome biogenesis protein |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 463
Score = 27.9 bits (59), Expect = 1.8
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +1
Query: 352 QFPFNCETCGEGFHDENEYITHTA 423
+F NCE C + F+ E Y +H A
Sbjct: 67 EFYQNCEVCNKKFYSEGAYSSHMA 90
>SPAC1B1.01 |||transcription factor Rdp1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 478
Score = 27.5 bits (58), Expect = 2.4
Identities = 15/53 (28%), Positives = 23/53 (43%), Gaps = 6/53 (11%)
Frame = +1
Query: 370 ETCGEGFHDENEYITHTAIGHVKLKP------FECNICHKRFTQQGGLMQHMR 510
E GE H+ + T++ + +P F C+ C F +Q GL H R
Sbjct: 107 ELKGEESHNSPGTLNGTSVANASKQPNMPNATFRCDKCDMMFVKQSGLTNHKR 159
>SPAP7G5.02c |gua2||GMP synthase [glutamine-hydrolyzing]
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 539
Score = 26.6 bits (56), Expect = 4.3
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = +1
Query: 379 GEGFHDENEYITHTAIGHVKLKPFECNICHKR 474
G FH E +THT +G +K F ICH +
Sbjct: 185 GLQFHPE---VTHTPLGLQLIKNFAIEICHAK 213
>SPAC2F7.10 |||palmitoyltransferase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 642
Score = 26.2 bits (55), Expect = 5.6
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +3
Query: 582 QHLRIHTKVKPYRCVICSKTFCQ 650
Q++ I K + YRC+ S T CQ
Sbjct: 468 QNIPIQKKYESYRCLFISGTICQ 490
>SPAC1399.01c |||purine permease |Schizosaccharomyces pombe|chr
1|||Manual
Length = 601
Score = 26.2 bits (55), Expect = 5.6
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = -2
Query: 581 VQSGLLGEGLRAVIARVGTVT 519
VQ G+LG+GL ++IA + T T
Sbjct: 380 VQGGILGDGLASLIASLMTTT 400
>SPCP1E11.03 |mug170||arrestin|Schizosaccharomyces pombe|chr
3|||Manual
Length = 426
Score = 25.8 bits (54), Expect = 7.4
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +1
Query: 493 LMQHMRCIRVTVPTRAITA 549
L Q++RC R T+P R IT+
Sbjct: 224 LDQNIRCTRCTIPKRVITS 242
>SPBC36.03c |||spermidine family transporter |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 538
Score = 25.8 bits (54), Expect = 7.4
Identities = 7/16 (43%), Positives = 12/16 (75%)
Frame = -1
Query: 696 GPRLCAFSCVASSGPI 649
GP +C F+C+ +GP+
Sbjct: 221 GPAVCIFACITFAGPL 236
>SPBC839.16 |||C-1-tetrahydrofolate synthase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 937
Score = 25.8 bits (54), Expect = 7.4
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +2
Query: 746 KLSPEDHNPANLTEEQRAKYAEL 814
KL + NP LTEE++ K+A L
Sbjct: 492 KLGIDKTNPEELTEEEQRKFARL 514
>SPAC30.04c |abc4||glutathione S-conjugate-exporting ATPase
Abc4|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1469
Score = 25.4 bits (53), Expect = 9.8
Identities = 13/34 (38%), Positives = 21/34 (61%), Gaps = 2/34 (5%)
Frame = -2
Query: 659 VDRLAERLRAYDAAI--WLHFSVNPEVLVQSGLL 564
V+R A+ +R+ D + WL FS+N + V G+L
Sbjct: 994 VNRFAKDIRSIDMNLSGWLFFSINCFLSVAGGIL 1027
>SPAC57A7.13 |||RNA-binding protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 565
Score = 25.4 bits (53), Expect = 9.8
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = -3
Query: 703 WNGATFVCVLMCCFKWTDWQNVFEHMTQ 620
W A +CVL C K+ W +V +H+TQ
Sbjct: 400 WKSA-LICVL-CERKFQSWGHVVKHITQ 425
>SPBC4F6.07c |||ATP-dependent RNA helicase Mak5 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 648
Score = 25.4 bits (53), Expect = 9.8
Identities = 8/15 (53%), Positives = 12/15 (80%)
Frame = -2
Query: 626 DAAIWLHFSVNPEVL 582
D + W HFS++PE+L
Sbjct: 120 DVSAWAHFSLSPEML 134
>SPAC19B12.03 |bgs3||1,3-beta-glucan synthase subunit
Bgs3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1826
Score = 25.4 bits (53), Expect = 9.8
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = -3
Query: 658 WTDWQNVFEHMTQRYGFTLV 599
WT W+ +F ++ +R FTL+
Sbjct: 691 WTPWRVIFSNLPRRIYFTLL 710
>SPAC31A2.12 |||arrestin/PY protein 1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 596
Score = 25.4 bits (53), Expect = 9.8
Identities = 16/45 (35%), Positives = 25/45 (55%)
Frame = +2
Query: 656 PLEATHENAHKRGPVPMWYLREALQAEQPFKLSPEDHNPANLTEE 790
P A++E AH+R + L E +QP SP +H+P+N E+
Sbjct: 383 PTYASNE-AHRRQLIAG--LTELALQQQPQGRSPNEHSPSNHPED 424
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,338,915
Number of Sequences: 5004
Number of extensions: 69516
Number of successful extensions: 280
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 211
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 259
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 402440190
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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