Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20386
(822 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_04_0194 + 20820985-20821027,20822168-20822367,20822477-208225... 53 3e-07
05_01_0042 - 290077-290676,291093-291233,291675-291764,292364-29... 49 4e-06
12_01_1024 - 10467644-10469274,10469424-10469482,10469820-104703... 45 6e-05
02_01_0113 - 854108-854302,854399-854542,854658-854893,855036-85... 42 6e-04
03_01_0360 + 2815067-2816033,2816120-2816198,2816275-2816342,281... 40 0.002
03_01_0342 - 2695323-2697007,2697134-2697248,2697369-2697524 39 0.004
01_06_1729 + 39486553-39487413,39487953-39488020,39489574-394901... 39 0.006
05_01_0160 + 1081416-1081647,1081840-1082012,1082169-1082246,108... 38 0.010
09_06_0277 - 21983049-21983080,21983250-21984788,21986619-219866... 38 0.013
05_05_0034 - 21741148-21741275,21741890-21741928,21742007-217421... 33 0.21
02_04_0539 - 23745936-23746097,23746661-23747566 32 0.48
01_06_0893 - 32766994-32768841,32769596-32769782,32769860-327699... 31 0.84
07_03_1575 - 27848977-27849095,27849254-27849302,27850270-278502... 31 1.1
05_03_0281 + 11560402-11560569,11561373-11561579,11562966-115631... 31 1.1
03_05_0589 + 25919965-25920331,25920461-25920780 31 1.5
02_01_0007 - 48497-48880 31 1.5
09_06_0349 + 22457820-22457987,22458202-22458246,22458597-224586... 30 1.9
07_03_0080 + 13193001-13193312 30 1.9
02_05_1255 - 35279751-35280338 30 1.9
02_05_0201 + 26687369-26689228 30 1.9
02_04_0316 - 21978330-21979397 29 2.5
12_02_0884 - 23986393-23987486,23988213-23988314,23988561-239886... 30 2.6
09_02_0366 + 7941550-7942161,7942230-7942775 30 2.6
08_02_1602 - 28148255-28149413,28151927-28152087 30 2.6
05_05_0030 - 21698625-21698752,21699589-21699627,21699708-216998... 30 2.6
12_01_0797 + 7300370-7300506,7300682-7300798,7301903-7302443,730... 29 3.4
05_01_0374 + 2924611-2924994 29 3.4
04_04_0733 + 27639581-27641257 29 3.4
07_03_1165 - 24459156-24460139 29 4.5
05_04_0440 + 21266281-21266400,21267395-21267447,21267542-212676... 29 4.5
01_06_1614 - 38648495-38649706 29 4.5
01_01_1052 + 8297105-8297422,8298978-8299310,8299820-8301010 29 4.5
08_02_1060 + 24007980-24008662,24010078-24010219,24010293-240115... 25 5.0
08_02_1057 + 23995782-23996446,23998026-23998167,23998242-239994... 25 5.1
06_03_0743 + 24069752-24070483,24071890-24072345 29 5.9
03_01_0343 - 2699518-2700114 29 5.9
02_05_0473 + 29319824-29322511,29322659-29322820,29324133-293242... 29 5.9
01_06_1495 + 37769982-37771496 29 5.9
01_06_1412 - 37140654-37141088,37141549-37142214 29 5.9
12_02_1122 - 26244667-26245299 28 7.8
09_04_0155 - 15185985-15186755,15187049-15187236,15187479-151875... 28 7.8
03_06_0063 - 31391870-31392679 28 7.8
03_05_0484 + 24808817-24809620,24810263-24810567,24811363-24812389 28 7.8
03_04_0187 - 18236041-18236643 25 9.6
>02_04_0194 +
20820985-20821027,20822168-20822367,20822477-20822566,
20822820-20822825,20822866-20823009,20823089-20823580
Length = 324
Score = 52.8 bits (121), Expect = 3e-07
Identities = 33/89 (37%), Positives = 44/89 (49%), Gaps = 8/89 (8%)
Frame = +3
Query: 519 GDRPYPCNY--CPKSFTQKSGLDQHLRIHTKVKPYRCVI--CSK--TFCQSVHLKQHMRT 680
G+R Y C+Y C K F S L +H IHT K + C C K F +LK HM+T
Sbjct: 68 GERQYVCHYAGCDKKFLDSSKLKRHFLIHTGEKNFVCPHEGCGKVLAFSLDFNLKAHMKT 127
Query: 681 HT--NVAPFQCGICEKRYKQSSHLNYHLK 761
H+ N + C +R+ Q S L H+K
Sbjct: 128 HSVDNYHVCKYPECARRFTQESKLRAHIK 156
>05_01_0042 -
290077-290676,291093-291233,291675-291764,292364-292563,
292685-292743,292827-292942
Length = 401
Score = 49.2 bits (112), Expect = 4e-06
Identities = 31/88 (35%), Positives = 41/88 (46%), Gaps = 8/88 (9%)
Frame = +3
Query: 522 DRPYPCNY--CPKSFTQKSGLDQHLRIHTKVKPYRCVI--CSKTFCQSVHLKQHMRTHT- 686
+R Y C C K F S L +H IHT K + C C K F +L+ H++TH
Sbjct: 113 ERQYICQEPGCGKKFVDSSKLKRHHLIHTGQKDFICPHPGCGKAFSLDFNLRSHLKTHAL 172
Query: 687 ---NVAPFQCGICEKRYKQSSHLNYHLK 761
+V PF C KR+ S L H+K
Sbjct: 173 ENYHVCPFPA--CGKRFTSDSKLKSHVK 198
Score = 39.1 bits (87), Expect = 0.004
Identities = 20/64 (31%), Positives = 30/64 (46%), Gaps = 4/64 (6%)
Frame = +3
Query: 504 HEMHTGDRPYPCNY--CPKSFTQKSGLDQHLRIHTKVKPYRCVI--CSKTFCQSVHLKQH 671
H +HTG + + C + C K+F+ L HL+ H + C C K F LK H
Sbjct: 137 HLIHTGQKDFICPHPGCGKAFSLDFNLRSHLKTHALENYHVCPFPACGKRFTSDSKLKSH 196
Query: 672 MRTH 683
++ H
Sbjct: 197 VKGH 200
>12_01_1024 - 10467644-10469274,10469424-10469482,10469820-10470357,
10470975-10471666,10471912-10472062,10473797-10473864,
10473964-10474042,10474763-10474765,10476427-10477255
Length = 1349
Score = 45.2 bits (102), Expect = 6e-05
Identities = 25/82 (30%), Positives = 37/82 (45%), Gaps = 4/82 (4%)
Frame = +3
Query: 534 PCNYCPKSFTQKSGLDQHLRIHTKVKPYRCVI--CSKTFCQSVHLKQHMRTHTNVAPFQC 707
P C K F L QH ++H +P +C C K F +HMR HT V P++C
Sbjct: 1256 PVKGCKKKFFCHKYLLQHRKVHIDERPLKCTWKGCKKAFKWPWARTEHMRVHTGVRPYEC 1315
Query: 708 GI--CEKRYKQSSHLNYHLKTT 767
C + ++ S + H + T
Sbjct: 1316 QEPGCGQTFRFVSDFSRHKRKT 1337
Score = 41.5 bits (93), Expect = 8e-04
Identities = 20/61 (32%), Positives = 31/61 (50%), Gaps = 4/61 (6%)
Frame = +3
Query: 507 EMHTGDRPYPCNY--CPKSFTQKSGLDQHLRIHTKVKPYRCVI--CSKTFCQSVHLKQHM 674
++H +RP C + C K+F +H+R+HT V+PY C C +TF +H
Sbjct: 1275 KVHIDERPLKCTWKGCKKAFKWPWARTEHMRVHTGVRPYECQEPGCGQTFRFVSDFSRHK 1334
Query: 675 R 677
R
Sbjct: 1335 R 1335
>02_01_0113 -
854108-854302,854399-854542,854658-854893,855036-855315,
856891-857031,857259-857372
Length = 369
Score = 41.9 bits (94), Expect = 6e-04
Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
Frame = +3
Query: 615 YRCVICSKTFCQSVHLKQHMRTHTNVAPFQCGI--CEKRYKQSSHLNYHL 758
+ C C +F + HLKQHM++H++ F C + C Y + HLN H+
Sbjct: 60 HTCQECGASFQKPAHLKQHMQSHSDERSFICPLEDCPFSYIRKDHLNRHM 109
Score = 33.9 bits (74), Expect = 0.16
Identities = 23/85 (27%), Positives = 42/85 (49%), Gaps = 8/85 (9%)
Frame = +3
Query: 537 CNYCPKSFTQKSGLDQHLRIHTKV---KPYRCVI--CSKTFCQSVHLKQHMR-THTNVAP 698
C+ C + +K+ + +HLR H +V + +C C +F +L +H++ +H V P
Sbjct: 216 CDICGEKHLKKN-IKRHLRAHEEVPSTERIKCSFEGCECSFSNKSNLTKHIKASHDQVKP 274
Query: 699 FQCGI--CEKRYKQSSHLNYHLKTT 767
F C CEK + + H K++
Sbjct: 275 FACRFTGCEKVFPYKHVRDNHEKSS 299
Score = 29.9 bits (64), Expect = 2.6
Identities = 26/95 (27%), Positives = 37/95 (38%), Gaps = 8/95 (8%)
Frame = +3
Query: 495 HATHEMHTGDRPYPCNY--CPKSFTQKSGLDQHLRIHTKVKPYRCVICSKTFCQSVHLK- 665
H +R + C C K F S + +H H K+ Y V+C + C
Sbjct: 142 HEDETATKSNRQFVCKEEGCNKVFKYASKMKKHEESHVKL-DYVEVVCCEPGCMKTFTNV 200
Query: 666 QHMRTHTNVAP--FQCGIC-EKRYKQS--SHLNYH 755
+ +R H QC IC EK K++ HL H
Sbjct: 201 ECLRAHNQACHQYVQCDICGEKHLKKNIKRHLRAH 235
Score = 28.3 bits (60), Expect = 7.8
Identities = 17/68 (25%), Positives = 30/68 (44%), Gaps = 2/68 (2%)
Frame = +1
Query: 280 DEHTKRRKGIRCQVCEKPMSVDAVQFPFNCETCGEGFHDENEYITHTAIGHVKLKPFECN 459
++H K+ + E+ S + ++ F E C F +++ H H ++KPF C
Sbjct: 221 EKHLKKNIKRHLRAHEEVPSTERIKCSF--EGCECSFSNKSNLTKHIKASHDQVKPFACR 278
Query: 460 I--CHKRF 477
C K F
Sbjct: 279 FTGCEKVF 286
>03_01_0360 + 2815067-2816033,2816120-2816198,2816275-2816342,
2817382-2817464,2821566-2823083
Length = 904
Score = 39.9 bits (89), Expect = 0.002
Identities = 21/76 (27%), Positives = 35/76 (46%), Gaps = 4/76 (5%)
Frame = +3
Query: 546 CPKSFTQKSGLDQHLRIHTKVKPYRCVI--CSKTFCQSVHLKQHMRTHTNVAPFQCGI-- 713
C K F+ L +H +H +P++C C TF +H+R HT P++C
Sbjct: 824 CGKRFSSHKYLKRHQCVHRDERPFKCPWDGCPMTFKWLWAQTEHIRVHTGERPYKCSAPD 883
Query: 714 CEKRYKQSSHLNYHLK 761
C + ++ S + H K
Sbjct: 884 CGQSFRYVSDYSRHRK 899
Score = 39.1 bits (87), Expect = 0.004
Identities = 16/49 (32%), Positives = 28/49 (57%), Gaps = 4/49 (8%)
Frame = +3
Query: 510 MHTGDRPYPCNY--CPKSFTQKSGLDQHLRIHTKVKPYRCVI--CSKTF 644
+H +RP+ C + CP +F +H+R+HT +PY+C C ++F
Sbjct: 840 VHRDERPFKCPWDGCPMTFKWLWAQTEHIRVHTGERPYKCSAPDCGQSF 888
Score = 29.9 bits (64), Expect = 2.6
Identities = 23/78 (29%), Positives = 33/78 (42%), Gaps = 7/78 (8%)
Frame = +3
Query: 543 YCPKSFTQKSGLDQHLR-IHTKVKPYRCVICSKTFCQSVHLKQHMRTHTNVAPFQC--GI 713
+C +F K+ L H R I T C K F +LK+H H + PF+C
Sbjct: 800 FCDMTFETKAELRAHQRNICTDES------CGKRFSSHKYLKRHQCVHRDERPFKCPWDG 853
Query: 714 CEKRYK----QSSHLNYH 755
C +K Q+ H+ H
Sbjct: 854 CPMTFKWLWAQTEHIRVH 871
>03_01_0342 - 2695323-2697007,2697134-2697248,2697369-2697524
Length = 651
Score = 39.1 bits (87), Expect = 0.004
Identities = 23/74 (31%), Positives = 30/74 (40%), Gaps = 4/74 (5%)
Frame = +3
Query: 546 CPKSFTQKSGLDQHLRIHTKVKPYRCVI--CSKTFCQSVHLKQHMRTHTNVAPFQCGI-- 713
C + F L +H IH PY+C CS F S +H + H P++C
Sbjct: 570 CGRHFRSHKYLRRHQSIHNDDMPYKCPWEGCSMAFKWSWDRGEHFQVHAGKRPYKCTTPG 629
Query: 714 CEKRYKQSSHLNYH 755
C K YK S H
Sbjct: 630 CSKIYKFVSDFTRH 643
Score = 35.5 bits (78), Expect = 0.051
Identities = 17/60 (28%), Positives = 27/60 (45%), Gaps = 4/60 (6%)
Frame = +3
Query: 510 MHTGDRPYPCNY--CPKSFTQKSGLDQHLRIHTKVKPYRCVI--CSKTFCQSVHLKQHMR 677
+H D PY C + C +F +H ++H +PY+C CSK + +H R
Sbjct: 586 IHNDDMPYKCPWEGCSMAFKWSWDRGEHFQVHAGKRPYKCTTPGCSKIYKFVSDFTRHKR 645
>01_06_1729 + 39486553-39487413,39487953-39488020,39489574-39490154,
39490623-39491432,39491738-39493035
Length = 1205
Score = 38.7 bits (86), Expect = 0.006
Identities = 23/82 (28%), Positives = 35/82 (42%), Gaps = 4/82 (4%)
Frame = +3
Query: 534 PCNYCPKSFTQKSGLDQHLRIHTKVKPYRCVI--CSKTFCQSVHLKQHMRTHTNVAPFQC 707
P C K F L QH ++HT +P C C+ F +H+R HT P+ C
Sbjct: 1112 PVKGCGKKFFSHKYLLQHRKVHTDDRPLTCPWKGCNMAFKWPWARTEHLRVHTGDRPYVC 1171
Query: 708 GI--CEKRYKQSSHLNYHLKTT 767
C + ++ S + H + T
Sbjct: 1172 HEPGCAQTFRFVSDFSRHKRKT 1193
Score = 38.7 bits (86), Expect = 0.006
Identities = 21/61 (34%), Positives = 31/61 (50%), Gaps = 4/61 (6%)
Frame = +3
Query: 507 EMHTGDRPYPCNY--CPKSFTQKSGLDQHLRIHTKVKPYRC--VICSKTFCQSVHLKQHM 674
++HT DRP C + C +F +HLR+HT +PY C C++TF +H
Sbjct: 1131 KVHTDDRPLTCPWKGCNMAFKWPWARTEHLRVHTGDRPYVCHEPGCAQTFRFVSDFSRHK 1190
Query: 675 R 677
R
Sbjct: 1191 R 1191
Score = 30.3 bits (65), Expect = 1.9
Identities = 25/83 (30%), Positives = 32/83 (38%), Gaps = 8/83 (9%)
Frame = +3
Query: 531 YPCNY--CPKSFTQKSGLDQHLRIHTKVKPYRCVICSKTFCQSVHLKQHMRTHTNVAPFQ 704
Y C+ C SF K L H VK C K F +L QH + HT+ P
Sbjct: 1086 YSCDIEGCSMSFRTKRDLSLHKSDICPVKG-----CGKKFFSHKYLLQHRKVHTDDRPLT 1140
Query: 705 CGI--CEKRYK----QSSHLNYH 755
C C +K ++ HL H
Sbjct: 1141 CPWKGCNMAFKWPWARTEHLRVH 1163
>05_01_0160 +
1081416-1081647,1081840-1082012,1082169-1082246,
1082372-1082529,1082558-1082709,1083232-1083290,
1083633-1083912,1084235-1084470,1084601-1084744,
1084845-1085012
Length = 559
Score = 37.9 bits (84), Expect = 0.010
Identities = 33/118 (27%), Positives = 62/118 (52%), Gaps = 20/118 (16%)
Frame = +3
Query: 480 STGW---PHATHE---MHT-GDRPYPCNY--CPKSFTQKSGLDQHLRIHTKVKPYRCVI- 629
S+GW P H+ +HT RP+ C+ CP S+++K L++HL H + K + C +
Sbjct: 263 SSGWGDSPEKLHQECLVHTLFQRPFSCHVDGCPFSYSRKDHLNRHLLTH-QGKLFACPME 321
Query: 630 -CSKTFCQSVHLKQHMR-THTNVAP------FQC--GICEKRYKQSSHLNYHLKTTIR 773
C++ F ++++H++ H + +P F C C K +K +S L H ++ ++
Sbjct: 322 GCNRKFTIKGNIQRHVQEMHKDGSPCESKKEFICPEENCGKTFKYASKLQKHEESHVK 379
Score = 29.5 bits (63), Expect = 3.4
Identities = 23/80 (28%), Positives = 32/80 (40%), Gaps = 6/80 (7%)
Frame = +3
Query: 534 PCNYCPKSFTQKSGLDQHLRIHTKVKPYRCVICSKTFCQSVH-----LKQHMRT-HTNVA 695
P C K+F S L +H H K+ Y VIC + C LK H ++ H +V
Sbjct: 356 PEENCGKTFKYASKLQKHEESHVKL-DYSEVICCEPGCMKAFTNLECLKAHNKSCHRHVV 414
Query: 696 PFQCGICEKRYKQSSHLNYH 755
CG + + H H
Sbjct: 415 CDVCGTKQLKKNFKRHQRMH 434
Score = 28.3 bits (60), Expect = 7.8
Identities = 15/56 (26%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
Frame = +1
Query: 352 QFPFNCETCGEGF-HDENEYITHTAIGHVKLKPFECNI--CHKRFTQQGGLMQHMR 510
Q PF+C G F + +++ + H + K F C + C+++FT +G + +H++
Sbjct: 284 QRPFSCHVDGCPFSYSRKDHLNRHLLTH-QGKLFACPMEGCNRKFTIKGNIQRHVQ 338
>09_06_0277 -
21983049-21983080,21983250-21984788,21986619-21986655,
21987612-21987665,21987781-21987893,21988272-21988660,
21988783-21988903,21989245-21989342,21989963-21990153
Length = 857
Score = 37.5 bits (83), Expect = 0.013
Identities = 18/62 (29%), Positives = 29/62 (46%)
Frame = +1
Query: 367 CETCGEGFHDENEYITHTAIGHVKLKPFECNICHKRFTQQGGLMQHMRCIRVTVPTRAIT 546
C C F DE + H K K F+C++CHK+ + GG+ H+ + T+
Sbjct: 13 CYYCDREFDDEKILVQHQ-----KAKHFKCHVCHKKLSTAGGMAIHVLQVHKESVTKVPN 67
Query: 547 AR 552
A+
Sbjct: 68 AK 69
>05_05_0034 - 21741148-21741275,21741890-21741928,21742007-21742121,
21742227-21742292,21743213-21743371,21743573-21743609,
21743757-21744194,21744735-21744817,21744920-21744956,
21745146-21745214,21745316-21745407,21745481-21745565,
21745903-21745982,21746327-21746724,21746813-21747717,
21747825-21747915,21748617-21750680,21750681-21750749,
21750850-21751273,21751644-21751763
Length = 1832
Score = 33.5 bits (73), Expect = 0.21
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = -2
Query: 377 HVSQLKGNCTASTDIGFSQT*QRIPFRLLVCSSRWCREYSQ 255
H++Q+ GN A T++ + +P +LL C R C E S+
Sbjct: 1200 HLAQMNGNMIAGTNVSSALASTELPVKLLHCCKRSCYEASE 1240
>02_04_0539 - 23745936-23746097,23746661-23747566
Length = 355
Score = 32.3 bits (70), Expect = 0.48
Identities = 17/64 (26%), Positives = 29/64 (45%)
Frame = +3
Query: 543 YCPKSFTQKSGLDQHLRIHTKVKPYRCVICSKTFCQSVHLKQHMRTHTNVAPFQCGICEK 722
+CP+ F + L +H + +R V C C + H+ H +V PF+ CE+
Sbjct: 167 HCPERFDTQDKLAEHRNLCR----FRIVNCKNDGCLASFSANHIEKHDSVCPFKVLPCEQ 222
Query: 723 RYKQ 734
+Q
Sbjct: 223 LCEQ 226
>01_06_0893 -
32766994-32768841,32769596-32769782,32769860-32769987,
32770080-32770283,32770373-32770523,32771424-32771533,
32772534-32772903,32773031-32773189,32773719-32773848,
32773921-32773989,32774066-32774154,32774319-32774439,
32775878-32776148
Length = 1278
Score = 31.5 bits (68), Expect = 0.84
Identities = 17/27 (62%), Positives = 20/27 (74%), Gaps = 1/27 (3%)
Frame = +3
Query: 105 LKPRVRKC-RR*HQGETEKRKLLQAHL 182
LK R+RK +R H+ E E RKLLQAHL
Sbjct: 650 LKDRLRKLGQRLHEKEIEGRKLLQAHL 676
>07_03_1575 - 27848977-27849095,27849254-27849302,27850270-27850287,
27850798-27851786,27852119-27852733,27852893-27852921,
27853990-27854453,27854530-27854654,27854743-27855025,
27855112-27856102,27856965-27857576,27857666-27858630
Length = 1752
Score = 31.1 bits (67), Expect = 1.1
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = +1
Query: 313 CQVCEKPMSVDAVQFPFNCETCGEGFHDENEYITHTAIGHVKLKPFECNIC 465
C++C+K S +++ CE CG+ FH + IT + + L F+C+ C
Sbjct: 1341 CRLCQKCYSGESIYIA--CEDCGDWFHGDIYSITLENVNN--LIGFKCHRC 1387
>05_03_0281 +
11560402-11560569,11561373-11561579,11562966-11563174,
11563261-11563309,11563611-11563673,11563799-11565472
Length = 789
Score = 31.1 bits (67), Expect = 1.1
Identities = 20/78 (25%), Positives = 32/78 (41%)
Frame = +1
Query: 253 ICEYSLHHRDEHTKRRKGIRCQVCEKPMSVDAVQFPFNCETCGEGFHDENEYITHTAIGH 432
ICE L+ R + + K +V + CE C F+ +NE TH + H
Sbjct: 128 ICEQKLYTRTQLNQHVKTGDSEVDGSEVERSGFAGHPMCEFCRSSFYGDNELYTHMSREH 187
Query: 433 VKLKPFECNICHKRFTQQ 486
+ C+IC ++ Q
Sbjct: 188 -----YSCHICQRQHPGQ 200
>03_05_0589 + 25919965-25920331,25920461-25920780
Length = 228
Score = 30.7 bits (66), Expect = 1.5
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = -1
Query: 735 SACSASRRYHIGTGPRLCAFSCVASSGPIG 646
S CS R + GP LCA S +A++GP G
Sbjct: 71 SCCSELRAFLRSQGPCLCAASRLAAAGPFG 100
>02_01_0007 - 48497-48880
Length = 127
Score = 30.7 bits (66), Expect = 1.5
Identities = 9/27 (33%), Positives = 14/27 (51%)
Frame = +3
Query: 525 RPYPCNYCPKSFTQKSGLDQHLRIHTK 605
R YPC +C + F L H+ +H +
Sbjct: 27 RSYPCGFCRREFRSAQALGGHMNVHRR 53
>09_06_0349 +
22457820-22457987,22458202-22458246,22458597-22458650,
22458742-22458846,22458932-22459138,22459217-22459302,
22459423-22460330,22460566-22460624
Length = 543
Score = 30.3 bits (65), Expect = 1.9
Identities = 9/27 (33%), Positives = 17/27 (62%)
Frame = +3
Query: 603 KVKPYRCVICSKTFCQSVHLKQHMRTH 683
K++ +C C + FC S++ ++H R H
Sbjct: 22 KLQLQKCTKCPREFCSSINYRRHTRVH 48
>07_03_0080 + 13193001-13193312
Length = 103
Score = 30.3 bits (65), Expect = 1.9
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = +3
Query: 531 YPCNYCPKSFTQKSGLDQHLRIHTK 605
Y C +C + FT L H+ IH K
Sbjct: 17 YECTFCKRGFTNAQALGGHMNIHRK 41
>02_05_1255 - 35279751-35280338
Length = 195
Score = 30.3 bits (65), Expect = 1.9
Identities = 14/60 (23%), Positives = 26/60 (43%)
Frame = +3
Query: 525 RPYPCNYCPKSFTQKSGLDQHLRIHTKVKPYRCVICSKTFCQSVHLKQHMRTHTNVAPFQ 704
+PY C +C + F L H+ +H K + R S + + ++ + T V F+
Sbjct: 45 QPYNCTFCRRGFPTAQALGGHMNVHRKDRVGRATPSSSSSTTAAAARRSVSYDTLVRLFR 104
>02_05_0201 + 26687369-26689228
Length = 619
Score = 30.3 bits (65), Expect = 1.9
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +1
Query: 436 KLKPFECNICHKRFTQQGGLMQHMRC 513
K K EC+ICH+ FT L H RC
Sbjct: 428 KGKVHECSICHRVFTSGQALGGHKRC 453
>02_04_0316 - 21978330-21979397
Length = 355
Score = 29.1 bits (62), Expect = 4.5
Identities = 24/82 (29%), Positives = 31/82 (37%), Gaps = 1/82 (1%)
Frame = +1
Query: 331 PMSVDAVQFPFNCETCGEGFHDENEYITHTAIG-HVKLKPFECNICHKRFTQQGGLMQHM 507
P+ V Q P G+G +D E + HV C+IC K F + L HM
Sbjct: 108 PVVVSVPQEPPQEAAKGDGDYDVVELDASELLAEHVHF----CDICGKGFRRDANLRMHM 163
Query: 508 RCIRVTVPTRAITARSPSPKSP 573
R T +R PK P
Sbjct: 164 RAHGDRFKTLDALSRPGQPKPP 185
Score = 27.9 bits (59), Expect(2) = 2.5
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +3
Query: 621 CVICSKTFCQSVHLKQHMRTH 683
C IC K F + +L+ HMR H
Sbjct: 146 CDICGKGFRRDANLRMHMRAH 166
Score = 20.6 bits (41), Expect(2) = 2.5
Identities = 6/23 (26%), Positives = 11/23 (47%)
Frame = +3
Query: 675 RTHTNVAPFQCGICEKRYKQSSH 743
R H P + +C + + + SH
Sbjct: 203 RAHRRFRPLKSAVCARNHFRRSH 225
>12_02_0884 -
23986393-23987486,23988213-23988314,23988561-23988642,
23989231-23989368
Length = 471
Score = 29.9 bits (64), Expect = 2.6
Identities = 20/78 (25%), Positives = 28/78 (35%), Gaps = 4/78 (5%)
Frame = +3
Query: 537 CNYCPKSFTQKSGLDQHLRIHTKVKPYRCVICSKTFCQSVHLKQHMRTHTNV----APFQ 704
CN C KSF + L H+ H V S +H+ N+ Q
Sbjct: 120 CNKCDKSFRSGNALGGHMSCHRSVGNQPKSTSSPPTVVDLHMPLLSSCDDNLLLLPPETQ 179
Query: 705 CGICEKRYKQSSHLNYHL 758
C +C K + S L H+
Sbjct: 180 CQMCSKVFSTSGSLREHM 197
>09_02_0366 + 7941550-7942161,7942230-7942775
Length = 385
Score = 29.9 bits (64), Expect = 2.6
Identities = 18/54 (33%), Positives = 24/54 (44%)
Frame = +3
Query: 519 GDRPYPCNYCPKSFTQKSGLDQHLRIHTKVKPYRCVICSKTFCQSVHLKQHMRT 680
G RPY C C K F + H + K+ + CV C F LK H+R+
Sbjct: 275 GARPYACRRCGKRFAVRGDWRTHEKNCGKL--WFCV-CGSDFKHKRSLKDHVRS 325
>08_02_1602 - 28148255-28149413,28151927-28152087
Length = 439
Score = 29.9 bits (64), Expect = 2.6
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +3
Query: 501 THEMHTGDRPYPCNYCPKSFTQKSGLDQHLRIHTKVKP 614
THE H GD + C+ C SF++K L H+ + +P
Sbjct: 368 THEKHCGDHRWLCS-CGTSFSRKDKLIGHVSLFAGHQP 404
>05_05_0030 - 21698625-21698752,21699589-21699627,21699708-21699822,
21699927-21699992,21701064-21701203,21701424-21701473,
21701608-21702045,21702757-21702839,21702941-21702977,
21703366-21703457,21703531-21703615,21703950-21704029,
21704049-21704105,21704350-21704747,21706322-21707223,
21707331-21707421,21708123-21710273,21710375-21710813,
21711180-21711299
Length = 1836
Score = 29.9 bits (64), Expect = 2.6
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = -2
Query: 377 HVSQLKGNCTASTDIGFSQT*QRIPFRLLVCSSRWCREYSQ 255
H++Q GN T++ + +P +LL C R C E S+
Sbjct: 1210 HLAQRNGNMIVDTNLSSALESTELPVKLLHCGKRSCYEASE 1250
>12_01_0797 + 7300370-7300506,7300682-7300798,7301903-7302443,
7302885-7304042,7304133-7304291,7304397-7304504,
7305045-7305304,7305936-7306101,7307025-7307050,
7307318-7307402,7307486-7307695,7308815-7308872,
7308964-7309037,7309323-7309373,7309576-7309664,
7310027-7310104,7310164-7310269
Length = 1140
Score = 29.5 bits (63), Expect = 3.4
Identities = 13/37 (35%), Positives = 17/37 (45%)
Frame = +3
Query: 579 DQHLRIHTKVKPYRCVICSKTFCQSVHLKQHMRTHTN 689
+QH +IH + +RC C K F L QH N
Sbjct: 949 EQH-KIHFDINEWRCGFCKKAFRAEKFLDQHFHNRHN 984
Score = 29.1 bits (62), Expect = 4.5
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = +3
Query: 504 HEMHTGDRPYPCNYCPKSFTQKSGLDQH 587
H++H + C +C K+F + LDQH
Sbjct: 951 HKIHFDINEWRCGFCKKAFRAEKFLDQH 978
>05_01_0374 + 2924611-2924994
Length = 127
Score = 29.5 bits (63), Expect = 3.4
Identities = 11/29 (37%), Positives = 14/29 (48%)
Frame = +3
Query: 519 GDRPYPCNYCPKSFTQKSGLDQHLRIHTK 605
G R +PC +C K F + L H H K
Sbjct: 10 GRRLFPCLFCEKKFVKSQALGGHQNAHRK 38
>04_04_0733 + 27639581-27641257
Length = 558
Score = 29.5 bits (63), Expect = 3.4
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = +1
Query: 436 KLKPFECNICHKRFTQQGGLMQHMRCIRVTVPTRAITARSP 558
K K EC++CH+ T L H RC +T + TA P
Sbjct: 379 KGKMHECSVCHRLVTSGQALGGHKRCHWLTSSSADHTASVP 419
>07_03_1165 - 24459156-24460139
Length = 327
Score = 29.1 bits (62), Expect = 4.5
Identities = 17/81 (20%), Positives = 31/81 (38%), Gaps = 5/81 (6%)
Frame = +3
Query: 531 YPCNYCPKSFTQKSGLDQHLRIHTKVKPYRCVICSKTFCQSVHLKQHMRTH---TNVAPF 701
+PC+ C K F + + H+R+H + VH + + T + P+
Sbjct: 113 FPCHLCNKEFGSRKAVHGHMRVHHAENEKEPMSLPPQVAAPVHPQARLPTRGASRSGGPY 172
Query: 702 QCGI--CEKRYKQSSHLNYHL 758
+C C Y+ L H+
Sbjct: 173 KCKYEGCIMEYESHQGLGGHV 193
>05_04_0440 +
21266281-21266400,21267395-21267447,21267542-21267651,
21268136-21268303,21268595-21268692,21269332-21269458,
21269587-21269693
Length = 260
Score = 29.1 bits (62), Expect = 4.5
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = +2
Query: 695 PVPMWYLREALQAEQPFKLSPEDHNPANLTEE 790
PVP+ EA+ E P K P +PAN T +
Sbjct: 9 PVPLGQAPEAVDPEDPVKSPPRPTSPANSTRK 40
>01_06_1614 - 38648495-38649706
Length = 403
Score = 29.1 bits (62), Expect = 4.5
Identities = 8/23 (34%), Positives = 14/23 (60%)
Frame = +3
Query: 531 YPCNYCPKSFTQKSGLDQHLRIH 599
+PC+ C K F + + H+R+H
Sbjct: 105 FPCHVCSKEFGSRKAVHGHMRVH 127
>01_01_1052 + 8297105-8297422,8298978-8299310,8299820-8301010
Length = 613
Score = 29.1 bits (62), Expect = 4.5
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = +1
Query: 367 CETCGEGFHDENEYITHTAIGHVKLKPFECNICHK 471
CE C F+ +NE TH H F C+IC +
Sbjct: 147 CEFCKSPFYGDNELYTHMTREH-----FSCHICQR 176
>08_02_1060 +
24007980-24008662,24010078-24010219,24010293-24011537,
24012453-24013040
Length = 885
Score = 24.6 bits (51), Expect(2) = 5.0
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = +1
Query: 448 FECNICHKRFTQQGGLMQHM 507
FEC +C+K F +Q H+
Sbjct: 367 FECPVCNKTFEEQSRYFGHV 386
Score = 22.6 bits (46), Expect(2) = 5.0
Identities = 7/24 (29%), Positives = 11/24 (45%)
Frame = +1
Query: 361 FNCETCGEGFHDENEYITHTAIGH 432
+ C+ C FH ++ Y H H
Sbjct: 318 YECQQCNLTFHGQSAYAHHLITFH 341
>08_02_1057 +
23995782-23996446,23998026-23998167,23998242-23999486,
23999521-23999529
Length = 686
Score = 24.6 bits (51), Expect(2) = 5.1
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = +1
Query: 448 FECNICHKRFTQQGGLMQHM 507
FEC +C+K F +Q H+
Sbjct: 361 FECPVCNKTFEEQSRYFGHI 380
Score = 22.6 bits (46), Expect(2) = 5.1
Identities = 7/24 (29%), Positives = 11/24 (45%)
Frame = +1
Query: 361 FNCETCGEGFHDENEYITHTAIGH 432
+ C+ C FH ++ Y H H
Sbjct: 312 YECQQCNLTFHGQSAYAHHLITFH 335
>06_03_0743 + 24069752-24070483,24071890-24072345
Length = 395
Score = 28.7 bits (61), Expect = 5.9
Identities = 14/52 (26%), Positives = 23/52 (44%), Gaps = 2/52 (3%)
Frame = +1
Query: 358 PFNCETCGEGFHDENEYITHTAIGHVKLKP--FECNICHKRFTQQGGLMQHM 507
P C + G G + +Y T + + P F C +C+K F + + HM
Sbjct: 197 PLGCASIGIGKLTKGQYWIPTP-SQILIGPTQFSCPVCYKTFNRYNNMQMHM 247
>03_01_0343 - 2699518-2700114
Length = 198
Score = 28.7 bits (61), Expect = 5.9
Identities = 12/31 (38%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
Frame = +3
Query: 516 TGDRPY-PCNYCPKSFTQKSGLDQHLRIHTK 605
T RPY C +C + FT L H+ IH +
Sbjct: 22 TAARPYYGCVFCKRGFTTAQALGGHMNIHRR 52
>02_05_0473 +
29319824-29322511,29322659-29322820,29324133-29324249,
29324360-29324469,29324504-29324540,29324696-29324862,
29325002-29325089,29325163-29325270
Length = 1158
Score = 28.7 bits (61), Expect = 5.9
Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 6/56 (10%)
Frame = +3
Query: 525 RPYPCNYCPKSFTQKSGLDQHL--RIHTKVKPY----RCVICSKTFCQSVHLKQHM 674
R Y C C SFT + L++H+ + + Y RC+ C+ F + L QH+
Sbjct: 495 RGYSCAVCMDSFTNRRVLERHVQEKHGAQYLQYSTLLRCISCNSNFLNTDLLWQHI 550
>01_06_1495 + 37769982-37771496
Length = 504
Score = 28.7 bits (61), Expect = 5.9
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +3
Query: 621 CVICSKTFCQSVHLKQHMRTH 683
C+IC K F + +L+ HMR H
Sbjct: 266 CLICGKGFKRDANLRMHMRGH 286
>01_06_1412 - 37140654-37141088,37141549-37142214
Length = 366
Score = 28.7 bits (61), Expect = 5.9
Identities = 19/64 (29%), Positives = 27/64 (42%), Gaps = 1/64 (1%)
Frame = +3
Query: 576 LDQHLRIHTKVKPYRCVICSKTFCQSVHLKQHMRTH-TNVAPFQCGICEKRYKQSSHLNY 752
L H + KP+RC C+K F +K RTH N C +K LN
Sbjct: 277 LQTHYKRKHGAKPFRCRRCAKPFA----VKGDWRTHEKNCGKRWFCACGSDFKHKRSLND 332
Query: 753 HLKT 764
H+++
Sbjct: 333 HVRS 336
>12_02_1122 - 26244667-26245299
Length = 210
Score = 28.3 bits (60), Expect = 7.8
Identities = 11/29 (37%), Positives = 14/29 (48%)
Frame = +3
Query: 519 GDRPYPCNYCPKSFTQKSGLDQHLRIHTK 605
G R +PC +C K F + L H H K
Sbjct: 69 GVRLFPCLFCNKKFLKSQALGGHQNAHKK 97
>09_04_0155 -
15185985-15186755,15187049-15187236,15187479-15187517,
15187741-15187768
Length = 341
Score = 28.3 bits (60), Expect = 7.8
Identities = 13/50 (26%), Positives = 24/50 (48%)
Frame = +1
Query: 454 CNICHKRFTQQGGLMQHMRCIRVTVPTRAITARSPSPKSPDWTSTSGFTL 603
C +C +FT Q L H++ ++ + R+PS +TS + +L
Sbjct: 220 CRVCQAKFTCQSDLQSHLKVMK-----HQLNLRAPSSDGSSFTSATSESL 264
>03_06_0063 - 31391870-31392679
Length = 269
Score = 28.3 bits (60), Expect = 7.8
Identities = 14/40 (35%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = +1
Query: 448 FECNICHKRFTQQGGLMQHMRCIRVTVPT-RAITARSPSP 564
F+C++C K F+ L H RV +PT A +P+P
Sbjct: 97 FKCSVCGKSFSSYQALGGHKTSHRVKLPTPPAAPVLAPAP 136
>03_05_0484 + 24808817-24809620,24810263-24810567,24811363-24812389
Length = 711
Score = 28.3 bits (60), Expect = 7.8
Identities = 25/64 (39%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Frame = -2
Query: 674 HVLLQVDRLAERLRAYDAAIWLHF-SVNPEVLVQSGLLGEGLRAVIAR---VGTVTRMHL 507
H L L ER+R YDA W++ V+ EVLV + L + LR I R +G V R+ L
Sbjct: 432 HHRLLPQELRERVRRYDAYKWVNTRGVDEEVLVAN--LPKDLRRDIKRHLCLGLVRRVPL 489
Query: 506 MCCM 495
M
Sbjct: 490 FANM 493
>03_04_0187 - 18236041-18236643
Length = 200
Score = 25.0 bits (52), Expect(2) = 9.6
Identities = 9/23 (39%), Positives = 12/23 (52%)
Frame = +3
Query: 615 YRCVICSKTFCQSVHLKQHMRTH 683
+RC +C +TF L H R H
Sbjct: 109 HRCSVCHRTFATGQALGGHKRCH 131
Score = 21.4 bits (43), Expect(2) = 9.6
Identities = 8/25 (32%), Positives = 11/25 (44%)
Frame = +3
Query: 531 YPCNYCPKSFTQKSGLDQHLRIHTK 605
+ C+ C K+F L H H K
Sbjct: 48 FRCSVCGKAFPSHQALGGHKASHRK 72
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,943,676
Number of Sequences: 37544
Number of extensions: 505876
Number of successful extensions: 1764
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 1405
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1737
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2256438528
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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