Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20386
(822 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g06634.1 68417.m01050 zinc finger (C2H2 type) family protein ... 52 5e-07
At1g72050.2 68414.m08328 zinc finger (C2H2 type) family protein ... 45 5e-05
At3g48430.1 68416.m05287 zinc finger (C2H2 type) family protein ... 44 9e-05
At5g04240.1 68418.m00414 zinc finger (C2H2 type) family protein ... 40 0.002
At1g72050.1 68414.m08329 zinc finger (C2H2 type) family protein ... 40 0.002
At2g48100.2 68415.m06021 exonuclease family protein contains Pfa... 38 0.008
At2g48100.1 68415.m06020 exonuclease family protein contains Pfa... 38 0.008
At1g30970.1 68414.m03792 zinc finger (C2H2 type) family protein ... 36 0.043
At5g40310.1 68418.m04890 exonuclease family protein contains exo... 34 0.099
At3g27970.1 68416.m03491 exonuclease family protein contains exo... 34 0.099
At1g09920.1 68414.m01116 TRAF-type zinc finger-related contains ... 34 0.099
At4g01920.1 68417.m00255 DC1 domain-containing protein similar t... 33 0.17
At3g53820.1 68416.m05946 zinc finger (C2H2 type) family protein ... 33 0.30
At3g19580.1 68416.m02483 zinc finger (C2H2 type) protein 2 (AZF2... 31 0.34
At5g63280.1 68418.m07942 zinc finger (C2H2 type) family protein ... 32 0.40
At5g56200.1 68418.m07012 zinc finger (C2H2 type) family protein ... 32 0.40
At4g30825.1 68417.m04371 pentatricopeptide (PPR) repeat-containi... 31 0.92
At2g36480.1 68415.m04477 zinc finger (C2H2-type) family protein ... 31 0.92
At4g25610.1 68417.m03689 zinc finger (C2H2 type) family protein ... 31 1.2
At4g16610.1 68417.m02512 zinc finger (C2H2 type) family protein ... 31 1.2
At3g11950.1 68416.m01473 UbiA prenyltransferase family protein c... 31 1.2
At2g37430.1 68415.m04590 zinc finger (C2H2 type) family protein ... 31 1.2
At1g08290.1 68414.m00915 zinc finger (C2H2 type) protein (WIP3) ... 31 1.2
At5g04340.1 68418.m00426 zinc finger (C2H2 type) family protein ... 28 1.3
At5g43540.1 68418.m05323 zinc finger (C2H2 type) family protein ... 30 1.6
At2g17600.1 68415.m02036 DC1 domain-containing protein contains ... 30 1.6
At1g26590.1 68414.m03239 zinc finger (C2H2 type) family protein ... 30 1.6
At5g14010.1 68418.m01638 zinc finger (C2H2 type) family protein ... 30 2.1
At4g17810.1 68417.m02657 zinc finger (C2H2 type) family protein ... 30 2.1
At3g29340.1 68416.m03684 zinc finger (C2H2 type) family protein ... 30 2.1
At3g20880.1 68416.m02640 zinc finger (C2H2 type) protein (WIP4) ... 30 2.1
At1g68360.1 68414.m07808 zinc finger protein-related similar to ... 30 2.1
At1g27730.1 68414.m03389 zinc finger (C2H2 type) family protein ... 28 2.1
At5g15480.1 68418.m01812 zinc finger (C2H2 type) family protein ... 29 2.8
At5g05120.1 68418.m00543 zinc finger (C2H2 type) family protein ... 29 2.8
At4g35280.1 68417.m05013 zinc finger (C2H2 type) family protein ... 29 2.8
At2g45120.1 68415.m05615 zinc finger (C2H2 type) family protein ... 29 2.8
At1g51220.1 68414.m05761 zinc finger (C2H2 type) protein (WIP5) ... 29 2.8
At1g14580.1 68414.m01734 zinc finger (C2H2 type) family protein ... 24 3.4
At5g59920.1 68418.m07514 DC1 domain-containing protein contains ... 29 3.7
At2g19260.1 68415.m02248 ELM2 domain-containing protein / PHD fi... 29 3.7
At2g01940.1 68415.m00129 zinc finger (C2H2 type) family protein ... 29 3.7
At1g68480.1 68414.m07823 zinc finger (C2H2 type) family protein ... 29 3.7
At5g48210.1 68418.m05956 expressed protein 29 4.9
At3g13010.1 68416.m01621 hAT dimerisation domain-containing prot... 29 4.9
At2g02470.1 68415.m00186 PHD finger family protein contains Pfam... 29 4.9
At1g80730.1 68414.m09472 zinc finger (C2H2 type) family protein ... 29 4.9
At1g68130.1 68414.m07782 zinc finger (C2H2 type) family protein ... 29 4.9
At1g02040.1 68414.m00124 zinc finger (C2H2 type) family protein ... 29 4.9
At5g43170.1 68418.m05269 zinc finger (C2H2 type) protein 3 (AZF3... 28 6.5
At5g42640.1 68418.m05191 zinc finger (C2H2 type) family protein ... 28 6.5
At5g22890.1 68418.m02677 zinc finger (C2H2 type) family protein ... 28 6.5
At5g03510.1 68418.m00307 zinc finger (C2H2 type) family protein ... 28 6.5
At3g60580.1 68416.m06777 zinc finger (C2H2 type) family protein ... 28 6.5
At3g57670.1 68416.m06425 zinc finger (C2H2 type) protein (WIP2) ... 28 6.5
At3g23130.1 68416.m02915 superman protein (SUP) / zinc finger (C... 28 6.5
At3g09290.1 68416.m01103 zinc finger (C2H2 type) family protein ... 28 6.5
At1g55700.1 68414.m06378 DC1 domain-containing protein contains ... 28 6.5
At1g34370.2 68414.m04268 zinc finger (C2H2 type) family protein ... 28 6.5
At1g34370.1 68414.m04267 zinc finger (C2H2 type) family protein ... 28 6.5
At5g17960.1 68418.m02106 DC1 domain-containing protein contains ... 28 8.6
At5g06070.1 68418.m00673 zinc finger (C2H2 type) family protein ... 28 8.6
At3g62240.1 68416.m06992 zinc finger (C2H2 type) family protein ... 28 8.6
At3g46810.1 68416.m05081 DC1 domain-containing protein contains ... 28 8.6
At3g20430.1 68416.m02587 expressed protein 28 8.6
At2g47090.1 68415.m05882 zinc finger (C2H2 type) family protein ... 28 8.6
At2g37740.1 68415.m04629 zinc finger (C2H2 type) family protein ... 28 8.6
At2g28200.1 68415.m03424 zinc finger (C2H2 type) family protein ... 28 8.6
At2g24500.1 68415.m02927 zinc finger (C2H2 type) family protein ... 28 8.6
At1g22000.1 68414.m02752 F-box family protein contains F-box dom... 28 8.6
At1g07430.1 68414.m00793 protein phosphatase 2C, putative / PP2C... 28 8.6
>At4g06634.1 68417.m01050 zinc finger (C2H2 type) family protein
contains Pfam PF00096: Zinc finger, C2H2 type
Length = 387
Score = 52.0 bits (119), Expect = 5e-07
Identities = 31/91 (34%), Positives = 40/91 (43%), Gaps = 6/91 (6%)
Frame = +3
Query: 504 HEMHTGDRPYPCNY--CPKSFTQKSGLDQHLRIHTKVKPYRCVI--CSKTFCQSVHLKQH 671
H G+R Y C+ C K F S L +H IHT + Y C C K F +L+ H
Sbjct: 99 HSHIHGERQYVCDQEGCGKKFLDSSKLKRHYLIHTGERNYICTYEGCGKAFSLDFNLRSH 158
Query: 672 MRTHTNVAPFQCGI--CEKRYKQSSHLNYHL 758
M+TH+ C C KRY L H+
Sbjct: 159 MKTHSQENYHICPYSGCVKRYAHEYKLKNHV 189
>At1g72050.2 68414.m08328 zinc finger (C2H2 type) family protein
contains multiple zinc finger domains: PF00096: Zinc
finger, C2H2 type
Length = 412
Score = 45.2 bits (102), Expect = 5e-05
Identities = 20/52 (38%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Frame = +3
Query: 615 YRCVICSKTFCQSVHLKQHMRTHTNVAPFQCGI--CEKRYKQSSHLNYHLKT 764
+ C C F + HLKQHM++H+ F C + C Y++ HLN HL T
Sbjct: 66 HTCQECGAEFKKPAHLKQHMQSHSLERSFTCYVDDCAASYRRKDHLNRHLLT 117
Score = 40.7 bits (91), Expect = 0.001
Identities = 19/81 (23%), Positives = 40/81 (49%), Gaps = 4/81 (4%)
Frame = +3
Query: 531 YPCNYCPKSFTQKSGLDQHLRIHTKVKPYRCVI--CSKTFCQSVHLKQHMRTHTNVAPFQ 704
+ C C F + + L QH++ H+ + + C + C+ ++ + HL +H+ TH F+
Sbjct: 66 HTCQECGAEFKKPAHLKQHMQSHSLERSFTCYVDDCAASYRRKDHLNRHLLTHKGKL-FK 124
Query: 705 C--GICEKRYKQSSHLNYHLK 761
C C+ + ++ H+K
Sbjct: 125 CPKENCKSEFSVQGNVGRHVK 145
Score = 39.9 bits (89), Expect = 0.002
Identities = 24/81 (29%), Positives = 40/81 (49%), Gaps = 8/81 (9%)
Frame = +3
Query: 537 CNYCPKSFTQKSGLDQHLRIHTKVKP---YRCVI--CSKTFCQSVHLKQHMR-THTNVAP 698
C C +K+ + +HLR H + +C + CS TF ++ +L++HM+ H ++ P
Sbjct: 277 CEICGSKHLKKN-IKRHLRTHDEDSSPGEIKCEVEGCSSTFSKASNLQKHMKAVHDDIRP 335
Query: 699 FQCGI--CEKRYKQSSHLNYH 755
F CG C R+ N H
Sbjct: 336 FVCGFPGCGMRFAYKHVRNKH 356
>At3g48430.1 68416.m05287 zinc finger (C2H2 type) family protein /
transcription factor jumonji (jmj) family protein
contains Pfam domains PF02375: jmjN domain, PF02373: jmjC
domain and PF00096: Zinc finger, C2H2 type
Length = 1354
Score = 44.4 bits (100), Expect = 9e-05
Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 4/82 (4%)
Frame = +3
Query: 534 PCNYCPKSFTQKSGLDQHLRIHTKVKPYRCVI--CSKTFCQSVHLKQHMRTHTNVAPFQC 707
P C K+F L QH R+H+ +P +C C TF + +H+R HT P+ C
Sbjct: 1263 PIKGCGKNFFSHKYLVQHQRVHSDDRPLKCPWKGCKMTFKWAWSRTEHIRVHTGARPYVC 1322
Query: 708 G--ICEKRYKQSSHLNYHLKTT 767
C + ++ S + H + T
Sbjct: 1323 AEPDCGQTFRFVSDFSRHKRKT 1344
>At5g04240.1 68418.m00414 zinc finger (C2H2 type) family protein /
transcription factor jumonji (jmj) family protein
contains Pfam domians PF02375: jmjN domain, PF02373: jmjC
domain and PF00096: Zinc finger, C2H2 type
Length = 1327
Score = 40.3 bits (90), Expect = 0.002
Identities = 23/79 (29%), Positives = 35/79 (44%), Gaps = 4/79 (5%)
Frame = +3
Query: 546 CPKSFTQKSGLDQHLRIHTKVKPYRCVI--CSKTFCQSVHLKQHMRTHTNVAPFQCGI-- 713
C K F L H R+H +P+ C CS TF +H+R HT P+ C +
Sbjct: 1245 CGKKFRAHKYLVLHQRVHKDERPFECSWKGCSMTFKWQWARTEHLRLHTGERPYICKVDG 1304
Query: 714 CEKRYKQSSHLNYHLKTTI 770
C ++ S + H + T+
Sbjct: 1305 CGLSFRFVSDYSRHRRKTM 1323
Score = 37.5 bits (83), Expect = 0.011
Identities = 18/60 (30%), Positives = 31/60 (51%), Gaps = 4/60 (6%)
Frame = +3
Query: 510 MHTGDRPYPCNY--CPKSFTQKSGLDQHLRIHTKVKPYRCVI--CSKTFCQSVHLKQHMR 677
+H +RP+ C++ C +F + +HLR+HT +PY C + C +F +H R
Sbjct: 1261 VHKDERPFECSWKGCSMTFKWQWARTEHLRLHTGERPYICKVDGCGLSFRFVSDYSRHRR 1320
Score = 30.3 bits (65), Expect = 1.6
Identities = 27/93 (29%), Positives = 36/93 (38%), Gaps = 10/93 (10%)
Frame = +3
Query: 507 EMHTGDRPYPCNY--CPKSFTQKSGLDQHLRIHTKVKPYRCVI--CSKTFCQSVHLKQHM 674
E+ T P C C +F K+ L H R RC C K F +L H
Sbjct: 1207 EVPTTTHPNRCYLEGCKMTFESKAKLQTHKR-------NRCTHEGCGKKFRAHKYLVLHQ 1259
Query: 675 RTHTNVAPFQCGI--CEKRYK----QSSHLNYH 755
R H + PF+C C +K ++ HL H
Sbjct: 1260 RVHKDERPFECSWKGCSMTFKWQWARTEHLRLH 1292
>At1g72050.1 68414.m08329 zinc finger (C2H2 type) family protein
contains multiple zinc finger domains: PF00096: Zinc
finger, C2H2 type
Length = 324
Score = 39.9 bits (89), Expect = 0.002
Identities = 24/81 (29%), Positives = 40/81 (49%), Gaps = 8/81 (9%)
Frame = +3
Query: 537 CNYCPKSFTQKSGLDQHLRIHTKVKP---YRCVI--CSKTFCQSVHLKQHMR-THTNVAP 698
C C +K+ + +HLR H + +C + CS TF ++ +L++HM+ H ++ P
Sbjct: 189 CEICGSKHLKKN-IKRHLRTHDEDSSPGEIKCEVEGCSSTFSKASNLQKHMKAVHDDIRP 247
Query: 699 FQCGI--CEKRYKQSSHLNYH 755
F CG C R+ N H
Sbjct: 248 FVCGFPGCGMRFAYKHVRNKH 268
>At2g48100.2 68415.m06021 exonuclease family protein contains Pfam
domain PF00929: exonuclease
Length = 344
Score = 37.9 bits (84), Expect = 0.008
Identities = 17/49 (34%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Frame = +3
Query: 615 YRCVICSKTFCQSVHLKQHMR-THTNVAPFQCGICEKRYKQSSHLNYHL 758
+RCV C K F + HL +HM+ ++ ++ +CG+C K K + HL
Sbjct: 17 HRCVACYKMFNRREHLVEHMKISYHSLHQPRCGVCLKHCKSFESVREHL 65
>At2g48100.1 68415.m06020 exonuclease family protein contains Pfam
domain PF00929: exonuclease
Length = 344
Score = 37.9 bits (84), Expect = 0.008
Identities = 17/49 (34%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Frame = +3
Query: 615 YRCVICSKTFCQSVHLKQHMR-THTNVAPFQCGICEKRYKQSSHLNYHL 758
+RCV C K F + HL +HM+ ++ ++ +CG+C K K + HL
Sbjct: 17 HRCVACYKMFNRREHLVEHMKISYHSLHQPRCGVCLKHCKSFESVREHL 65
>At1g30970.1 68414.m03792 zinc finger (C2H2 type) family protein
contains Pfam domain PF00096: Zinc finger, C2H2 type
Length = 367
Score = 35.5 bits (78), Expect = 0.043
Identities = 15/47 (31%), Positives = 24/47 (51%)
Frame = +1
Query: 367 CETCGEGFHDENEYITHTAIGHVKLKPFECNICHKRFTQQGGLMQHM 507
C C F DE + H K K F+C++CHK+ + G++ H+
Sbjct: 14 CYYCDREFDDEKILVQHQ-----KAKHFKCHVCHKKLSTASGMVIHV 55
>At5g40310.1 68418.m04890 exonuclease family protein contains
exonuclease domain, Pfam:PF00929
Length = 348
Score = 34.3 bits (75), Expect = 0.099
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = +3
Query: 618 RCVICSKTFCQSVHLKQHMR-THTNVAPFQCGICEKRYKQSSHLNYHL 758
+C C + F + HL +HMR ++ +V CGIC K + L HL
Sbjct: 7 KCGGCYRQFNKKEHLVEHMRISYHSVHEPTCGICNKHCRSFDSLREHL 54
>At3g27970.1 68416.m03491 exonuclease family protein contains
exonuclease domain, Pfam:PF00929
Length = 354
Score = 34.3 bits (75), Expect = 0.099
Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Frame = +3
Query: 618 RCVICSKTFCQSVHLKQHMRT--HTNVAPFQCGICEKRYKQSSHLNYHL 758
+C C + F + HL +HM+ H+ P CG+C+K + L HL
Sbjct: 16 KCAACYRQFNKLEHLVEHMKISYHSGHEP-TCGVCKKHCRSFESLREHL 63
>At1g09920.1 68414.m01116 TRAF-type zinc finger-related contains
Pfam PF02176: TRAF-type zinc finger; similar to TNF
receptor associated factor 4 (GI:7274404) [Mus musculus]
(GI:7274404); similar to Cysteine rich motif Associated
to Ring and Traf domains protein (mCART1)(GI:1041446)
[Mus musculus]
Length = 192
Score = 34.3 bits (75), Expect = 0.099
Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Frame = +3
Query: 507 EMHTGDRPYPCNYCPKSFTQKSGLDQHLRIHTKVKPYRCVICSKTFCQSVHLKQH-MRTH 683
E TG+ CN+C + + +D H R+H +C IC + H ++H + TH
Sbjct: 2 ETATGEITIVCNHCDRDIPSLN-IDLH-RVHCARNLEKCKICGDMVPKK-HAEEHYLNTH 58
Query: 684 TNVAPFQCGICEK 722
AP C +C++
Sbjct: 59 ---APIACSMCKE 68
>At4g01920.1 68417.m00255 DC1 domain-containing protein similar to
A. thaliana CHP-rich proteins
Length = 658
Score = 33.5 bits (73), Expect = 0.17
Identities = 14/47 (29%), Positives = 22/47 (46%)
Frame = +1
Query: 253 ICEYSLHHRDEHTKRRKGIRCQVCEKPMSVDAVQFPFNCETCGEGFH 393
+ + S H T +K I+ +C K + +FP+NC C FH
Sbjct: 116 VIDISKTHHHRLTLLKKWIKQCICAKCCKIIGNEFPYNCHECDLSFH 162
>At3g53820.1 68416.m05946 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 142
Score = 32.7 bits (71), Expect = 0.30
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +3
Query: 525 RPYPCNYCPKSFTQKSGLDQHLRIHTK 605
RPY C +C + F+ L H+ IH K
Sbjct: 19 RPYICEFCERGFSNAQALGGHMNIHRK 45
>At3g19580.1 68416.m02483 zinc finger (C2H2 type) protein 2 (AZF2)
identical to Cys2/His2-type zinc finger protein 2
[Arabidopsis thaliana] gi|6009885|dbj|BAA85107
Length = 273
Score = 31.5 bits (68), Expect = 0.70
Identities = 17/58 (29%), Positives = 25/58 (43%)
Frame = +1
Query: 388 FHDENEYITHTAIGHVKLKPFECNICHKRFTQQGGLMQHMRCIRVTVPTRAITARSPS 561
FH +++ +T K P++CN+C K F L H R+ PT T S
Sbjct: 88 FHQQSQSLTPPP--ESKNLPYKCNVCEKAFPSYQALGGHKASHRIKPPTVISTTADDS 143
Score = 29.1 bits (62), Expect(2) = 0.34
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = +3
Query: 528 PYPCNYCPKSFTQKSGLDQHLRIHTKVKP 614
PY CN C K+F L H H ++KP
Sbjct: 105 PYKCNVCEKAFPSYQALGGHKASH-RIKP 132
Score = 27.9 bits (59), Expect = 8.6
Identities = 12/24 (50%), Positives = 13/24 (54%)
Frame = +1
Query: 442 KPFECNICHKRFTQQGGLMQHMRC 513
K EC+ICHK F L H RC
Sbjct: 163 KIHECSICHKVFPTGQALGGHKRC 186
Score = 22.2 bits (45), Expect(2) = 0.34
Identities = 10/25 (40%), Positives = 11/25 (44%)
Frame = +3
Query: 609 KPYRCVICSKTFCQSVHLKQHMRTH 683
K + C IC K F L H R H
Sbjct: 163 KIHECSICHKVFPTGQALGGHKRCH 187
>At5g63280.1 68418.m07942 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 271
Score = 32.3 bits (70), Expect = 0.40
Identities = 15/53 (28%), Positives = 23/53 (43%), Gaps = 1/53 (1%)
Frame = +3
Query: 504 HEMHTGDRPYPCNYCPKSFTQKSGLDQHLRI-HTKVKPYRCVICSKTFCQSVH 659
H++H + C YC KSF + LD+H H + C C ++H
Sbjct: 96 HKVHVDVFEWKCGYCKKSFNDEKFLDKHFSTRHYNLLNTTDTKCLADLCGALH 148
Score = 31.9 bits (69), Expect = 0.53
Identities = 10/34 (29%), Positives = 19/34 (55%)
Frame = +3
Query: 663 KQHMRTHTNVAPFQCGICEKRYKQSSHLNYHLKT 764
++H + H +V ++CG C+K + L+ H T
Sbjct: 93 QEHHKVHVDVFEWKCGYCKKSFNDEKFLDKHFST 126
Score = 28.7 bits (61), Expect = 4.9
Identities = 12/38 (31%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = +3
Query: 582 QHLRIHTKVKPYRCVICSKTFCQSVHLKQHMRT-HTNV 692
+H ++H V ++C C K+F L +H T H N+
Sbjct: 94 EHHKVHVDVFEWKCGYCKKSFNDEKFLDKHFSTRHYNL 131
>At5g56200.1 68418.m07012 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 493
Score = 32.3 bits (70), Expect = 0.40
Identities = 21/66 (31%), Positives = 29/66 (43%), Gaps = 3/66 (4%)
Frame = +1
Query: 412 THTAIGHVKLKPFECNICHKRFTQQGGLMQHMRCIRVTVPTRAI---TARSPSPKSPDWT 582
T+T++ CNICHK F+ L H RC T P + T + +P P
Sbjct: 399 TNTSLSSSHNGDHVCNICHKSFSTGQALGGHKRC-HWTAPVSTVAPTTVPTAAPTVPATA 457
Query: 583 STSGFT 600
S+S T
Sbjct: 458 SSSQVT 463
>At4g30825.1 68417.m04371 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 904
Score = 31.1 bits (67), Expect = 0.92
Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 3/37 (8%)
Frame = -3
Query: 706 HWNGATFVCVLMCCFK---WTDWQNVFEHMTQRYGFT 605
HWN + CV+ CC + + FE M RYGFT
Sbjct: 661 HWNQEMYNCVINCCARALPLDELSGTFEEMI-RYGFT 696
>At2g36480.1 68415.m04477 zinc finger (C2H2-type) family protein
weak similarity to S-locus protein 4 (GI:6069478)
[Brassica rapa]; weak similarity to Pre-mRNA cleavage
complex II protein Pcf11 (Fragment) (Swiss-Prot:O94913)
[Homo sapiens]; contains Prosite PS00028: Zinc finger,
C2H2 type, domain
Length = 828
Score = 31.1 bits (67), Expect = 0.92
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +3
Query: 522 DRPYPCNYCPKSFTQKSGLDQHLRIHTKVK 611
D P+ C C QK LD+H+ +H K K
Sbjct: 676 DLPHLCTSCSVRLKQKEELDRHMELHDKKK 705
>At4g25610.1 68417.m03689 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 586
Score = 30.7 bits (66), Expect = 1.2
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = +3
Query: 603 KVKPYRCVICSKTFCQSVHLKQHMRTH 683
K++ +C CS+ FC V+ ++H R H
Sbjct: 57 KIQMQKCEKCSREFCSPVNFRRHNRMH 83
>At4g16610.1 68417.m02512 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 204
Score = 30.7 bits (66), Expect = 1.2
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = +3
Query: 615 YRCVICSKTFCQSVHLKQHMRTH 683
++C +CSK+FC L HM++H
Sbjct: 5 HKCKLCSKSFCNGRALGGHMKSH 27
>At3g11950.1 68416.m01473 UbiA prenyltransferase family protein
contains Pfam profile PF01040: UbiA prenyltransferase
family
Length = 954
Score = 30.7 bits (66), Expect = 1.2
Identities = 13/41 (31%), Positives = 19/41 (46%)
Frame = +3
Query: 615 YRCVICSKTFCQSVHLKQHMRTHTNVAPFQCGICEKRYKQS 737
YR + C C +V M H +V PF+ CE+ +S
Sbjct: 190 YRTMNCENEGCTAVFCANQMENHDSVCPFKIIPCEQNCSES 230
>At2g37430.1 68415.m04590 zinc finger (C2H2 type) family protein
(ZAT11) contains Pfam domain, PF00096: Zinc finger, C2H2
type
Length = 178
Score = 30.7 bits (66), Expect = 1.2
Identities = 13/51 (25%), Positives = 24/51 (47%)
Frame = +3
Query: 624 VICSKTFCQSVHLKQHMRTHTNVAPFQCGICEKRYKQSSHLNYHLKTTIRP 776
++ + + + L QH +HT+ F+C C KR+ L H + +P
Sbjct: 23 ILAQTSMVKQIGLNQHTESHTS-NQFECKTCNKRFSSFQALGGHRASHKKP 72
>At1g08290.1 68414.m00915 zinc finger (C2H2 type) protein (WIP3)
identical to WIP3 protein [Arabidopsis thaliana]
gi|18027014|gb|AAL55723; contains Pfam domain, PF00096:
Zinc finger, C2H2 type
Length = 337
Score = 30.7 bits (66), Expect = 1.2
Identities = 22/86 (25%), Positives = 34/86 (39%), Gaps = 3/86 (3%)
Frame = +1
Query: 259 EYSLHHRDEHTKRR---KGIRCQVCEKPMSVDAVQFPFNCETCGEGFHDENEYITHTAIG 429
+ + H+ + KR G+ + M D + E CG+ F +I A
Sbjct: 119 DITFDHQKKPIKREIIEDGVVMMKKRRKMKFDEEIIDSDVEVCGKRF-----WIPSPAQI 173
Query: 430 HVKLKPFECNICHKRFTQQGGLMQHM 507
HV F C+IC K F + + HM
Sbjct: 174 HVGPMQFACSICSKTFNRYNNMQMHM 199
Score = 29.1 bits (62), Expect = 3.7
Identities = 9/37 (24%), Positives = 19/37 (51%)
Frame = +3
Query: 489 WPHATHEMHTGDRPYPCNYCPKSFTQKSGLDQHLRIH 599
W + ++H G + C+ C K+F + + + H+ H
Sbjct: 166 WIPSPAQIHVGPMQFACSICSKTFNRYNNMQMHMWGH 202
Score = 29.1 bits (62), Expect = 3.7
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +3
Query: 591 RIHTKVKPYRCVICSKTFCQSVHLKQHMRTH 683
+IH + C ICSKTF + +++ HM H
Sbjct: 172 QIHVGPMQFACSICSKTFNRYNNMQMHMWGH 202
>At5g04340.1 68418.m00426 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 238
Score = 27.9 bits (59), Expect = 8.6
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = +1
Query: 427 GHVKLKPFECNICHKRFTQQGGLMQHMRC 513
G +K C+ICHK F L H RC
Sbjct: 141 GGGSVKSHVCSICHKSFATGQALGGHKRC 169
Score = 25.0 bits (52), Expect(2) = 1.3
Identities = 11/26 (42%), Positives = 13/26 (50%)
Frame = +3
Query: 606 VKPYRCVICSKTFCQSVHLKQHMRTH 683
VK + C IC K+F L H R H
Sbjct: 145 VKSHVCSICHKSFATGQALGGHKRCH 170
Score = 24.2 bits (50), Expect(2) = 1.3
Identities = 9/25 (36%), Positives = 12/25 (48%)
Frame = +3
Query: 531 YPCNYCPKSFTQKSGLDQHLRIHTK 605
Y C+ C K+F+ L H H K
Sbjct: 89 YKCSVCDKAFSSYQALGGHKASHRK 113
>At5g43540.1 68418.m05323 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 137
Score = 30.3 bits (65), Expect = 1.6
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = +3
Query: 525 RPYPCNYCPKSFTQKSGLDQHLRIHTK 605
R Y C +C + FT L H+ IH +
Sbjct: 33 RMYECTFCKRGFTNAQALGGHMNIHRR 59
>At2g17600.1 68415.m02036 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 580
Score = 30.3 bits (65), Expect = 1.6
Identities = 18/53 (33%), Positives = 22/53 (41%), Gaps = 5/53 (9%)
Frame = +1
Query: 253 ICEYSLHHRDEHTKRRKGIR-----CQVCEKPMSVDAVQFPFNCETCGEGFHD 396
IC S H HT R+ R C C+K F ++C TC FHD
Sbjct: 9 ICRLS-HPTHSHTLSRRAGRIPPSGCFACDKEEPSPCSTFHYSCTTCDVEFHD 60
>At1g26590.1 68414.m03239 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 361
Score = 30.3 bits (65), Expect = 1.6
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +3
Query: 522 DRPYPCNYCPKSFTQKSGLDQHLRIHT 602
+ + C YC K+F L H+RIHT
Sbjct: 6 ENSFLCKYCYKTFPSGKALGGHIRIHT 32
>At5g14010.1 68418.m01638 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 161
Score = 29.9 bits (64), Expect = 2.1
Identities = 10/27 (37%), Positives = 13/27 (48%)
Frame = +3
Query: 525 RPYPCNYCPKSFTQKSGLDQHLRIHTK 605
R +PC YCP+ F L H H +
Sbjct: 36 RLFPCQYCPRKFYTSQALGGHQNAHKR 62
>At4g17810.1 68417.m02657 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 180
Score = 29.9 bits (64), Expect = 2.1
Identities = 9/27 (33%), Positives = 14/27 (51%)
Frame = +3
Query: 525 RPYPCNYCPKSFTQKSGLDQHLRIHTK 605
R Y CN+C + F L H+ +H +
Sbjct: 38 RSYTCNFCRREFRSAQALGGHMNVHRR 64
>At3g29340.1 68416.m03684 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 650
Score = 29.9 bits (64), Expect = 2.1
Identities = 20/79 (25%), Positives = 34/79 (43%), Gaps = 2/79 (2%)
Frame = +3
Query: 531 YPCNYCPKSFTQKSGLDQHLRIHTKVKPYRCVICSKTFCQSVHLKQHM--RTHTNVAPFQ 704
+ C C KSF L H RIH +P + + + F + K + R ++ + ++
Sbjct: 43 HKCKICGKSFECYQALGGHQRIH---RPIKEKLSKQEFSEVYPRKSKLQKRPESSSSCYE 99
Query: 705 CGICEKRYKQSSHLNYHLK 761
C +C K + L H K
Sbjct: 100 CKVCGKIFGCYRGLGGHTK 118
Score = 28.7 bits (61), Expect = 4.9
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = +3
Query: 537 CNYCPKSFTQKSGLDQHLRIHTKV 608
C C KSF GL H R+H ++
Sbjct: 200 CKICGKSFVCSQGLGNHKRVHREI 223
Score = 27.9 bits (59), Expect = 8.6
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = +3
Query: 531 YPCNYCPKSFTQKSGLDQHLRIH 599
Y C+ C KSF L H R+H
Sbjct: 445 YKCSICEKSFVCSQALGSHQRLH 467
Score = 27.9 bits (59), Expect = 8.6
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = +3
Query: 615 YRCVICSKTFCQSVHLKQHMRTH 683
Y+C IC K+F S L H R H
Sbjct: 445 YKCSICEKSFVCSQALGSHQRLH 467
>At3g20880.1 68416.m02640 zinc finger (C2H2 type) protein (WIP4)
identical to WIP4 protein [Arabidopsis thaliana]
gi|18376500|emb|CAC86168; contains Pfam domain, PF00096:
Zinc finger, C2H2 type
Length = 412
Score = 29.9 bits (64), Expect = 2.1
Identities = 21/74 (28%), Positives = 31/74 (41%)
Frame = +3
Query: 519 GDRPYPCNYCPKSFTQKSGLDQHLRIHTKVKPYRCVICSKTFCQSVHLKQHMRTHTNVAP 698
G RP+ C C K+F K H + K+ + C C F LK H++ N
Sbjct: 336 GVRPFACRRCGKAFAVKGDWRTHEKNCGKL--WYC-SCGSDFKHKRSLKDHVKAFGNGHV 392
Query: 699 FQCGICEKRYKQSS 740
CGI + + +S
Sbjct: 393 PCCGIDHEEEEAAS 406
>At1g68360.1 68414.m07808 zinc finger protein-related similar to
zinc finger protein GI:790683 from [Arabidopsis
thaliana]
Length = 244
Score = 29.9 bits (64), Expect = 2.1
Identities = 11/29 (37%), Positives = 13/29 (44%)
Frame = +3
Query: 519 GDRPYPCNYCPKSFTQKSGLDQHLRIHTK 605
G+R Y C YC + F L H H K
Sbjct: 69 GERKYECQYCCREFGNSQALGGHQNAHKK 97
>At1g27730.1 68414.m03389 zinc finger (C2H2 type) family protein
(ZAT10) / salt-tolerance zinc finger protein (STZ)
identical to salt-tolerance zinc finger protein
GB:CAA64820 GI:1565227 from [Arabidopsis thaliana];
contains Pfam domain, PF00096: Zinc finger, C2H2 type;
identical to cDNA zinc finger protein STZ/ZAT10
(STZ/ZAT10) GI:9965730
Length = 227
Score = 28.3 bits (60), Expect = 6.5
Identities = 15/42 (35%), Positives = 18/42 (42%), Gaps = 1/42 (2%)
Frame = +3
Query: 477 HSTGWPHATHEMHTGD-RPYPCNYCPKSFTQKSGLDQHLRIH 599
HST T + TG + + C C KSF L H R H
Sbjct: 117 HSTSSATTTSAVTTGSGKSHVCTICNKSFPSGQALGGHKRCH 158
Score = 24.2 bits (50), Expect(2) = 2.1
Identities = 9/25 (36%), Positives = 12/25 (48%)
Frame = +3
Query: 531 YPCNYCPKSFTQKSGLDQHLRIHTK 605
Y C+ C K+F+ L H H K
Sbjct: 80 YKCSVCDKTFSSYQALGGHKASHRK 104
Score = 24.2 bits (50), Expect(2) = 2.1
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = +3
Query: 609 KPYRCVICSKTFCQSVHLKQHMRTH 683
K + C IC+K+F L H R H
Sbjct: 134 KSHVCTICNKSFPSGQALGGHKRCH 158
>At5g15480.1 68418.m01812 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 402
Score = 29.5 bits (63), Expect = 2.8
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +1
Query: 361 FNCETCGEGFHDENEYITHTAIGHVKLKPFECNICHK 471
F CE CG+GF E + H ++ H L P E +C +
Sbjct: 64 FRCEECGKGFRYEKYFKNHRSMMH--LSPNE-KVCEE 97
>At5g05120.1 68418.m00543 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 201
Score = 29.5 bits (63), Expect = 2.8
Identities = 10/25 (40%), Positives = 12/25 (48%)
Frame = +3
Query: 531 YPCNYCPKSFTQKSGLDQHLRIHTK 605
Y C YCP+ F + L H H K
Sbjct: 27 YKCKYCPRKFDKTQALGGHQNAHRK 51
>At4g35280.1 68417.m05013 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 284
Score = 29.5 bits (63), Expect = 2.8
Identities = 15/45 (33%), Positives = 21/45 (46%)
Frame = +3
Query: 549 PKSFTQKSGLDQHLRIHTKVKPYRCVICSKTFCQSVHLKQHMRTH 683
P + + SG D +I T ++C IC + F L HMR H
Sbjct: 200 PMTVSTSSGHDHQGKILTFSGHHKCNICFRVFSSGQALGGHMRCH 244
>At2g45120.1 68415.m05615 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 314
Score = 29.5 bits (63), Expect = 2.8
Identities = 14/34 (41%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Frame = +3
Query: 531 YPCNYCPKSFTQKSGLDQHLRIH-TKVKPYRCVI 629
Y C +C KSF L H+R H + RCVI
Sbjct: 4 YKCRFCFKSFINGRALGGHMRSHMLTLSAERCVI 37
>At1g51220.1 68414.m05761 zinc finger (C2H2 type) protein (WIP5)
identical to WIP5 protein [Arabidopsis thaliana]
gi|18376498|emb|CAC86167; contains Pfam domain, PF00096:
Zinc finger, C2H2 type
Length = 337
Score = 29.5 bits (63), Expect = 2.8
Identities = 19/65 (29%), Positives = 27/65 (41%)
Frame = +3
Query: 519 GDRPYPCNYCPKSFTQKSGLDQHLRIHTKVKPYRCVICSKTFCQSVHLKQHMRTHTNVAP 698
G +P+ C C K+F K H + K+ + C C F LK H++ N
Sbjct: 258 GSKPFACRMCGKAFAVKGDWRTHEKNCGKL--WYC-SCGSDFKHKRSLKDHVKAFGN-GH 313
Query: 699 FQCGI 713
CGI
Sbjct: 314 VPCGI 318
>At1g14580.1 68414.m01734 zinc finger (C2H2 type) family protein
similar to zinc finger protein ID1 GB:AAC18941
GI:3170601 from [Zea mays] contains Pfam domain,
PF00096: Zinc finger, C2H2 type
Length = 467
Score = 24.2 bits (50), Expect(2) = 3.4
Identities = 11/35 (31%), Positives = 15/35 (42%)
Frame = +3
Query: 660 LKQHMRTHTNVAPFQCGICEKRYKQSSHLNYHLKT 764
+K+H ++C C KRY S H KT
Sbjct: 145 IKKHYYRKHGEKKWKCDKCSKRYAVQSDWKAHSKT 179
Score = 23.4 bits (48), Expect(2) = 3.4
Identities = 8/23 (34%), Positives = 14/23 (60%)
Frame = +3
Query: 615 YRCVICSKTFCQSVHLKQHMRTH 683
+ C +C+K F + +L+ H R H
Sbjct: 82 FLCEVCNKGFQREQNLQLHRRGH 104
>At5g59920.1 68418.m07514 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 710
Score = 29.1 bits (62), Expect = 3.7
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = +1
Query: 391 HDENEYITHTAIGHVKLKPFECNICHKRFTQQGG 492
HD Y+TH H+ EC +CHK +Q G
Sbjct: 289 HDHRIYLTH----HLGTGYSECGVCHKNVSQYKG 318
>At2g19260.1 68415.m02248 ELM2 domain-containing protein / PHD
finger family protein contains Pfam profiles: PF01448
ELM2 domain, PF00628 PHD-finger
Length = 631
Score = 29.1 bits (62), Expect = 3.7
Identities = 21/77 (27%), Positives = 36/77 (46%), Gaps = 3/77 (3%)
Frame = +1
Query: 310 RCQVCEKPMSVDAVQFPFNCETCGEGFHDENEYITHTAIGHVKLKPFECNICHKR---FT 480
+C+ C+KP +V+ + C+ C E +H + + ++ + C C K T
Sbjct: 411 QCKHCDKPGTVEKMLI---CDECEEAYHTRCCGVQMKDV--AEIDEWLCPSCLKNQSSKT 465
Query: 481 QQGGLMQHMRCIRVTVP 531
+ G + H R RVTVP
Sbjct: 466 KTKGRISHERKWRVTVP 482
>At2g01940.1 68415.m00129 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 439
Score = 29.1 bits (62), Expect = 3.7
Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Frame = +3
Query: 654 VHLKQHMRT-HTNVAPFQCGICEKRYKQSSHLNYHLKT 764
V +K+H R H+N + C C K Y S HLKT
Sbjct: 129 VGIKKHFRRKHSNHKQWVCERCSKGYAVQSDYKAHLKT 166
>At1g68480.1 68414.m07823 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 253
Score = 29.1 bits (62), Expect = 3.7
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = +3
Query: 609 KPYRCVICSKTFCQSVHLKQHMRTH 683
K Y C CS FC+S L HM H
Sbjct: 49 KVYECRFCSLKFCKSQALGGHMNRH 73
>At5g48210.1 68418.m05956 expressed protein
Length = 103
Score = 28.7 bits (61), Expect = 4.9
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = -2
Query: 452 SNGFSFTCPIAV*VIYSFSSWKPSPHVSQLKGNCTASTDI 333
SN F F P+ V+++ S PSP SQL +C +S ++
Sbjct: 3 SNKFFFLLPVVCIVVFATSQPLPSPQPSQL--DCWSSLEV 40
>At3g13010.1 68416.m01621 hAT dimerisation domain-containing protein
contains Pfam profile PF04937: Protein of unknown
function (DUF 659), weak hit to PF05699: hAT family
dimerisation domain
Length = 572
Score = 28.7 bits (61), Expect = 4.9
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = +3
Query: 693 APFQCGICEKRYKQSSHLNYHLKTTIRPI*PRNNV 797
A QC C+KR + L YHL + + P + V
Sbjct: 19 ARVQCTFCDKRMNDFNRLKYHLGNVCKDVTPCSQV 53
>At2g02470.1 68415.m00186 PHD finger family protein contains Pfam
domain, PF00628: PHD-finger
Length = 256
Score = 28.7 bits (61), Expect = 4.9
Identities = 17/65 (26%), Positives = 26/65 (40%)
Frame = +1
Query: 280 DEHTKRRKGIRCQVCEKPMSVDAVQFPFNCETCGEGFHDENEYITHTAIGHVKLKPFECN 459
DE +G C C D +F C+ C + FH + IT H+ K ++C
Sbjct: 192 DESEDDEQGAVCGACGDNYGTD--EFWICCDACEKWFHGKCVKITPAKAEHI--KHYKCP 247
Query: 460 ICHKR 474
C +
Sbjct: 248 TCSNK 252
>At1g80730.1 68414.m09472 zinc finger (C2H2 type) family protein
(ZFP1) identical to zinc finger protein, ZFP1
gi|790673|gb|AAA87297; contains zinc finger, C2H2 type,
domain, Prosite:PS00028
Length = 228
Score = 28.7 bits (61), Expect = 4.9
Identities = 13/47 (27%), Positives = 18/47 (38%), Gaps = 2/47 (4%)
Frame = +3
Query: 471 KIHSTGWPHATHEMH--TGDRPYPCNYCPKSFTQKSGLDQHLRIHTK 605
K S+ H H+ R + CNYC + F L H H +
Sbjct: 46 KTSSSSTSHHQHQQEQLADPRVFSCNYCQRKFYSSQALGGHQNAHKR 92
>At1g68130.1 68414.m07782 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 419
Score = 28.7 bits (61), Expect = 4.9
Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Frame = +3
Query: 654 VHLKQHMRT-HTNVAPFQCGICEKRYKQSSHLNYHLKT 764
V +K+H R H+N + C C K Y S HLKT
Sbjct: 132 VGIKKHFRRKHSNHKQWICERCSKGYAVQSDYKAHLKT 169
Score = 27.9 bits (59), Expect = 8.6
Identities = 22/79 (27%), Positives = 35/79 (44%), Gaps = 2/79 (2%)
Frame = +3
Query: 573 GLDQHLRI-HTKVKPYRCVICSKTFCQSVHLKQHMRT-HTNVAPFQCGICEKRYKQSSHL 746
G+ +H R H+ K + C CSK + K H++T T CG R + S +
Sbjct: 133 GIKKHFRRKHSNHKQWICERCSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVE--SFI 190
Query: 747 NYHLKTTIRPI*PRNNVLN 803
+ T+R P N+ L+
Sbjct: 191 EHQDTCTVRRSQPSNHRLH 209
>At1g02040.1 68414.m00124 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 324
Score = 28.7 bits (61), Expect = 4.9
Identities = 15/41 (36%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
Frame = +1
Query: 394 DENEYITHTA-IGHVKLKPFECNICHKRFTQQGGLMQHMRC 513
+E+E TA I + EC ICH+ F+ L H RC
Sbjct: 206 EEDEEDKSTAHIARKRSNAHECTICHRVFSSGQALGGHKRC 246
>At5g43170.1 68418.m05269 zinc finger (C2H2 type) protein 3 (AZF3)
identical to Cys2/His2-type zinc finger protein 3
[Arabidopsis thaliana] gi|6009889|dbj|BAA85109
Length = 193
Score = 28.3 bits (60), Expect = 6.5
Identities = 19/66 (28%), Positives = 24/66 (36%), Gaps = 15/66 (22%)
Frame = +3
Query: 531 YPCNYCPKSFTQKSGLDQHLRIH---------------TKVKPYRCVICSKTFCQSVHLK 665
Y C C K+F+ L H H T VK + C +C K+F L
Sbjct: 75 YKCGVCYKTFSSYQALGGHKASHRSLYGGGENDKSTPSTAVKSHVCSVCGKSFATGQALG 134
Query: 666 QHMRTH 683
H R H
Sbjct: 135 GHKRCH 140
>At5g42640.1 68418.m05191 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 300
Score = 28.3 bits (60), Expect = 6.5
Identities = 13/35 (37%), Positives = 16/35 (45%)
Frame = +3
Query: 585 HLRIHTKVKPYRCVICSKTFCQSVHLKQHMRTHTN 689
H +TK PY C C+ F S HM +H N
Sbjct: 233 HSLPYTKYGPYTCPRCNGVFDTSQKFAAHMLSHYN 267
>At5g22890.1 68418.m02677 zinc finger (C2H2 type) family protein
contains Pfam domain PF00096: Zinc finger, C2H2 type
Length = 373
Score = 28.3 bits (60), Expect = 6.5
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +3
Query: 621 CVICSKTFCQSVHLKQHMRTH 683
C IC K F + +L+ HMR H
Sbjct: 219 CQICGKGFKRDANLRMHMRAH 239
Score = 27.9 bits (59), Expect = 8.6
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +3
Query: 501 THEMHTGDRPYPCNYCPKSFTQKSGLDQHLRI 596
THE H GD + C+ C F++K L H+ +
Sbjct: 324 THEKHCGDIKWVCS-CGTKFSRKDKLMSHVSL 354
>At5g03510.1 68418.m00307 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 292
Score = 28.3 bits (60), Expect = 6.5
Identities = 16/56 (28%), Positives = 23/56 (41%)
Frame = +3
Query: 609 KPYRCVICSKTFCQSVHLKQHMRTHTNVAPFQCGICEKRYKQSSHLNYHLKTTIRP 776
K + C IC F L HMR H + + SS ++H + +IRP
Sbjct: 190 KTHECSICKAEFSSGQALGGHMRRHRGLTINANATSAIKTAISSSSHHHHEESIRP 245
>At3g60580.1 68416.m06777 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 288
Score = 28.3 bits (60), Expect = 6.5
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = +3
Query: 606 VKPYRCVICSKTFCQSVHLKQHMRTH 683
++ Y+C +C K+F L HMR+H
Sbjct: 1 MESYKCRVCFKSFVNGKALGGHMRSH 26
>At3g57670.1 68416.m06425 zinc finger (C2H2 type) protein (WIP2)
identical to WIP2 protein [Arabidopsis thaliana]
gi|18027012|gb|AAL55722; contains Pfam domain, PF00096:
Zinc finger, C2H2 type
Length = 383
Score = 28.3 bits (60), Expect = 6.5
Identities = 18/63 (28%), Positives = 25/63 (39%), Gaps = 1/63 (1%)
Frame = +3
Query: 576 LDQHLRIHTKVKPYRCVICSKTFCQSVHLKQHMRTH-TNVAPFQCGICEKRYKQSSHLNY 752
L H + +KP+ C C K F ++ RTH N IC +K L
Sbjct: 288 LQTHYKRKHGIKPFMCRKCGKAFA----VRGDWRTHEKNCGKLWYCICGSDFKHKRSLKD 343
Query: 753 HLK 761
H+K
Sbjct: 344 HIK 346
>At3g23130.1 68416.m02915 superman protein (SUP) / zinc finger (C2H2
type) family protein identical to superman protein
GB:S60325 from [Arabidopsis thaliana]; contains Pfam
domain, PF00096: Zinc finger, C2H2 type
Length = 204
Score = 28.3 bits (60), Expect = 6.5
Identities = 8/27 (29%), Positives = 14/27 (51%)
Frame = +3
Query: 525 RPYPCNYCPKSFTQKSGLDQHLRIHTK 605
R Y C++C + F L H+ +H +
Sbjct: 45 RSYTCSFCKREFRSAQALGGHMNVHRR 71
>At3g09290.1 68416.m01103 zinc finger (C2H2 type) family protein ;
contains Pfam profile: PF00096 Zinc finger, C2H2 type
Length = 172
Score = 28.3 bits (60), Expect = 6.5
Identities = 9/27 (33%), Positives = 15/27 (55%)
Frame = +3
Query: 525 RPYPCNYCPKSFTQKSGLDQHLRIHTK 605
R Y C++C + F+ L H+ IH +
Sbjct: 33 RSYVCSFCIRGFSNAQALGGHMNIHRR 59
>At1g55700.1 68414.m06378 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 679
Score = 28.3 bits (60), Expect = 6.5
Identities = 9/29 (31%), Positives = 16/29 (55%)
Frame = +1
Query: 325 EKPMSVDAVQFPFNCETCGEGFHDENEYI 411
E P+S+ + P C+ CG + N+Y+
Sbjct: 239 EHPLSIFPRRIPLPCDACGLSLENTNDYV 267
>At1g34370.2 68414.m04268 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 499
Score = 28.3 bits (60), Expect = 6.5
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +3
Query: 621 CVICSKTFCQSVHLKQHMRTH 683
C IC K F + +L+ HMR H
Sbjct: 246 CTICGKGFKRDANLRMHMRGH 266
>At1g34370.1 68414.m04267 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 499
Score = 28.3 bits (60), Expect = 6.5
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +3
Query: 621 CVICSKTFCQSVHLKQHMRTH 683
C IC K F + +L+ HMR H
Sbjct: 246 CTICGKGFKRDANLRMHMRGH 266
>At5g17960.1 68418.m02106 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 599
Score = 27.9 bits (59), Expect = 8.6
Identities = 10/29 (34%), Positives = 15/29 (51%)
Frame = +1
Query: 313 CQVCEKPMSVDAVQFPFNCETCGEGFHDE 399
C C K +S + F ++C C FH+E
Sbjct: 40 CFTCGKQVSTSSRGFHYHCTICDVDFHEE 68
>At5g06070.1 68418.m00673 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 226
Score = 27.9 bits (59), Expect = 8.6
Identities = 8/27 (29%), Positives = 14/27 (51%)
Frame = +3
Query: 525 RPYPCNYCPKSFTQKSGLDQHLRIHTK 605
R Y C++C + F L H+ +H +
Sbjct: 53 RSYSCSFCGREFKSAQALGGHMNVHRR 79
>At3g62240.1 68416.m06992 zinc finger (C2H2 type) family protein
contains Pfam PF00096: Zinc finger, C2H2 type
Length = 812
Score = 27.9 bits (59), Expect = 8.6
Identities = 11/35 (31%), Positives = 18/35 (51%)
Frame = +1
Query: 367 CETCGEGFHDENEYITHTAIGHVKLKPFECNICHK 471
CE C F+ +NE TH + H + C++C +
Sbjct: 200 CEFCRNPFYGDNELYTHMSTEH-----YTCHLCQR 229
>At3g46810.1 68416.m05081 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 686
Score = 27.9 bits (59), Expect = 8.6
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +1
Query: 313 CQVCEKPMSVDAVQFPFNCETCGEGFH 393
C VCEK VDA + + C+ CG H
Sbjct: 576 CDVCEK--RVDAKTWFYTCDACGVTLH 600
>At3g20430.1 68416.m02587 expressed protein
Length = 265
Score = 27.9 bits (59), Expect = 8.6
Identities = 16/52 (30%), Positives = 30/52 (57%)
Frame = +1
Query: 274 HRDEHTKRRKGIRCQVCEKPMSVDAVQFPFNCETCGEGFHDENEYITHTAIG 429
++++ K++K + V +KPMSVD F +TC ++ Y+ +TA+G
Sbjct: 69 NKNKRKKKKKKRKGPVMDKPMSVDW----FVRDTC-RRLKEKKSYMIYTAVG 115
>At2g47090.1 68415.m05882 zinc finger (C2H2 type) family protein
contains Prosite PS00028: Zinc finger, C2H2 type, domain
Length = 745
Score = 27.9 bits (59), Expect = 8.6
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = +1
Query: 367 CETCGEGFHDENEYITHTAIGHVKLKPFECNICHK 471
CE C F+ +NE TH + H + C+IC +
Sbjct: 200 CEFCKRPFYGDNELYTHMSREH-----YTCHICQR 229
>At2g37740.1 68415.m04629 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 304
Score = 27.9 bits (59), Expect = 8.6
Identities = 8/27 (29%), Positives = 14/27 (51%)
Frame = +3
Query: 525 RPYPCNYCPKSFTQKSGLDQHLRIHTK 605
R Y C++C + F L H+ +H +
Sbjct: 37 RSYTCSFCRREFKSAQALGGHMNVHRR 63
>At2g28200.1 68415.m03424 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 284
Score = 27.9 bits (59), Expect = 8.6
Identities = 14/31 (45%), Positives = 15/31 (48%)
Frame = +1
Query: 442 KPFECNICHKRFTQQGGLMQHMRCIRVTVPT 534
K EC+IC FT L HMR R V T
Sbjct: 186 KVHECSICGSEFTSGQALGGHMRRHRTAVTT 216
>At2g24500.1 68415.m02927 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 395
Score = 27.9 bits (59), Expect = 8.6
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +3
Query: 699 FQCGICEKRYKQSSHLNYHLKT 764
+ CGIC K Y+ S HLK+
Sbjct: 68 YSCGICNKGYRSSKAHEQHLKS 89
>At1g22000.1 68414.m02752 F-box family protein contains F-box domain
Pfam:PF00646
Length = 727
Score = 27.9 bits (59), Expect = 8.6
Identities = 13/59 (22%), Positives = 31/59 (52%)
Frame = -1
Query: 504 VLHEATLLSESFMTYVTFKRLQFHVPYSGVSYIFVLIVEAFAACLTVERKLYSIDRHWF 328
++ + L E+F++ V + +F S V ++F+L ++ AC + + I+ ++F
Sbjct: 279 LIENMSFLDEAFISNVPYPDEKFLRSLSSVKHLFLLFSKSMVACCNAIKFSWLIEFYFF 337
>At1g07430.1 68414.m00793 protein phosphatase 2C, putative / PP2C,
putative similar to GB:CAB90633 from [Fagus sylvatica]
Length = 442
Score = 27.9 bits (59), Expect = 8.6
Identities = 13/32 (40%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Frame = +2
Query: 701 PMWYLREALQAEQPFKLSPEDHNP-ANLTEEQ 793
P+W R+ Q F++SP + NP A+ TEE+
Sbjct: 17 PLWSSRKWRIGVQRFRMSPSEMNPTASTTEEE 48
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,980,803
Number of Sequences: 28952
Number of extensions: 390383
Number of successful extensions: 1519
Number of sequences better than 10.0: 73
Number of HSP's better than 10.0 without gapping: 1132
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1495
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1882599200
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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