Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20383
(783 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 168 9e-43
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 161 1e-40
SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyc... 137 1e-33
SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M... 135 6e-33
SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce... 103 4e-23
SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein Pss1|Sch... 51 2e-07
SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces pom... 42 1e-04
SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr 2|||... 35 0.011
SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces pombe... 30 0.33
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 29 0.75
SPAC22G7.06c |ura1||carbamoyl-phosphate synthase |Schizosaccharo... 29 0.99
SPAC25B8.04c |||mitochondrial splicing suppressor |Schizosacchar... 29 0.99
SPAC1527.03 |||RNA-binding protein|Schizosaccharomyces pombe|chr... 26 7.0
SPBC776.10c |cog6||Golgi transport complex peripheral subunit Co... 26 7.0
SPBC25H2.13c |cdc20|pol2|DNA polymerase epsilon catalytic subuni... 25 9.3
SPAC1F7.01c |spt6|SPAC694.07c|transcription elongation factor Sp... 25 9.3
SPAC823.11 |||sphingosine-1-phosphate phosphatase |Schizosacchar... 25 9.3
>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 647
Score = 168 bits (408), Expect = 9e-43
Identities = 91/170 (53%), Positives = 110/170 (64%), Gaps = 1/170 (0%)
Frame = +3
Query: 255 PNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSM 434
P+NTIFDAKRLIGRKF+D VQ+DMKHWPF+V+S GKP ++V YKGE KTF PEE+SSM
Sbjct: 61 PHNTIFDAKRLIGRKFDDPEVQSDMKHWPFKVISKDGKPVLQVEYKGETKTFTPEEISSM 120
Query: 435 VLTKMKETAEAYLGKTVQNAVITVPRTSMTLKDKPQKMQVPSLA*TFSESSMNXXXXXXX 614
VL KM+ETAEAYLG V +AV+TVP + + K +A +N
Sbjct: 121 VLMKMRETAEAYLGGKVTDAVVTVPAYFNDSQRQATK-DAGLIAGLNVLRIINEPTAAAI 179
Query: 615 XXXXXXXXENEM-YLSLTSAAVPFDVSILTIEDGIFEVKSTAGDTHLGGE 761
+ E L FDVS+LTIE+GIFEVK+TAGDTHLGGE
Sbjct: 180 AYGLDRSNQGESNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGE 229
Score = 112 bits (269), Expect = 6e-26
Identities = 51/58 (87%), Positives = 55/58 (94%)
Frame = +1
Query: 85 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP 258
++GIDLGTTYSCVG F + +VEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP
Sbjct: 4 SIGIDLGTTYSCVGHFSNNRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP 61
Score = 108 bits (259), Expect = 1e-24
Identities = 51/58 (87%), Positives = 53/58 (91%)
Frame = +2
Query: 509 AYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGTF 682
AYFNDSQRQATKDAG I+GLNVLRIINEPTAAAIAYGLD+ GE NVLIFDLGGGTF
Sbjct: 146 AYFNDSQRQATKDAGLIAGLNVLRIINEPTAAAIAYGLDRSNQGESNVLIFDLGGGTF 203
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 161 bits (390), Expect = 1e-40
Identities = 87/170 (51%), Positives = 109/170 (64%), Gaps = 1/170 (0%)
Frame = +3
Query: 255 PNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSM 434
P+NTIFDAKRLIGR+F D VQ+DMKHWPF+V+ GKP I+V +KGE KTF PEE+SSM
Sbjct: 61 PHNTIFDAKRLIGRRFNDPEVQSDMKHWPFKVIEKDGKPLIQVEFKGETKTFTPEEISSM 120
Query: 435 VLTKMKETAEAYLGKTVQNAVITVPRTSMTLKDKPQKMQVPSLA*TFSESSMNXXXXXXX 614
VL KM+E+AEA+LG V +AV+TVP + + K +A +N
Sbjct: 121 VLLKMRESAEAFLGGKVTDAVVTVPAYFNDSQRQATK-DAGLIAGLNVLRIINEPTAAAI 179
Query: 615 XXXXXXXXENEM-YLSLTSAAVPFDVSILTIEDGIFEVKSTAGDTHLGGE 761
++E L FDVS+LTIE+GIFEVK+TAGDTHLGGE
Sbjct: 180 AYGLDRSNQHETNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGE 229
Score = 112 bits (269), Expect = 6e-26
Identities = 51/58 (87%), Positives = 55/58 (94%)
Frame = +1
Query: 85 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP 258
++GIDLGTTYSCVG F + +VEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP
Sbjct: 4 SIGIDLGTTYSCVGHFSNNRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP 61
Score = 105 bits (251), Expect = 9e-24
Identities = 50/58 (86%), Positives = 52/58 (89%)
Frame = +2
Query: 509 AYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGTF 682
AYFNDSQRQATKDAG I+GLNVLRIINEPTAAAIAYGLD+ E NVLIFDLGGGTF
Sbjct: 146 AYFNDSQRQATKDAGLIAGLNVLRIINEPTAAAIAYGLDRSNQHETNVLIFDLGGGTF 203
>SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 613
Score = 137 bits (332), Expect = 1e-33
Identities = 75/170 (44%), Positives = 99/170 (58%), Gaps = 1/170 (0%)
Frame = +3
Query: 255 PNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSM 434
P NT+FDAKRLIGR++ED Q D+KHWPF+V+ + G P I+V Y GE K F +E+S+M
Sbjct: 65 PRNTVFDAKRLIGRRYEDPETQKDIKHWPFKVIDNNGIPTIEVNYLGEKKQFTAQEISAM 124
Query: 435 VLTKMKETAEAYLGKTVQNAVITVPRTSMTLKDKPQKMQVPSLA*TFSESSMNXXXXXXX 614
VLTKMKE +EA L K V+ AVITVP + + ++A +N
Sbjct: 125 VLTKMKEISEAKLNKRVEKAVITVP-AYFSDSQRAATKDAGAIAGLNVLRIINEPTAAAI 183
Query: 615 XXXXXXXXEN-EMYLSLTSAAVPFDVSILTIEDGIFEVKSTAGDTHLGGE 761
+ + L FDVS+L I+ G+FEV +TAGDTHLGGE
Sbjct: 184 AYGLDAKSDKPKNVLIFDLGGGTFDVSLLKIQGGVFEVLATAGDTHLGGE 233
Score = 100 bits (240), Expect = 2e-22
Identities = 48/58 (82%), Positives = 51/58 (87%)
Frame = +2
Query: 509 AYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGTF 682
AYF+DSQR ATKDAG I+GLNVLRIINEPTAAAIAYGLD K +NVLIFDLGGGTF
Sbjct: 150 AYFSDSQRAATKDAGAIAGLNVLRIINEPTAAAIAYGLDAKSDKPKNVLIFDLGGGTF 207
Score = 100 bits (239), Expect = 3e-22
Identities = 45/58 (77%), Positives = 51/58 (87%)
Frame = +1
Query: 85 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP 258
A+GIDLGTTYSCV V++ VEII NDQG RTTPS+VAFT+TERL+GDAAKNQ AMNP
Sbjct: 8 AIGIDLGTTYSCVAVWETANVEIIPNDQGARTTPSFVAFTETERLVGDAAKNQAAMNP 65
>SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr
1|||Manual
Length = 663
Score = 135 bits (327), Expect = 6e-33
Identities = 71/169 (42%), Positives = 103/169 (60%)
Frame = +3
Query: 255 PNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSM 434
P NTIFD KRLIGRKF++ T+ D+K +PF +V+D +P ++V G+ K F PEE+S+M
Sbjct: 94 PENTIFDIKRLIGRKFDEKTMAKDIKSFPFHIVNDKNRPLVEVNVGGKKKKFTPEEISAM 153
Query: 435 VLTKMKETAEAYLGKTVQNAVITVPRTSMTLKDKPQKMQVPSLA*TFSESSMNXXXXXXX 614
+L+KMK+TAEAYLGK V +AV+TVP + + K ++A +N
Sbjct: 154 ILSKMKQTAEAYLGKPVTHAVVTVPAYFNDAQRQATK-DAGTIAGLNVIRIVNEPTAAAI 212
Query: 615 XXXXXXXXENEMYLSLTSAAVPFDVSILTIEDGIFEVKSTAGDTHLGGE 761
+ + FDVS+L+I++G+FEV +T+GDTHLGGE
Sbjct: 213 AYGLDKTDTEKHIVVYDLGGGTFDVSLLSIDNGVFEVLATSGDTHLGGE 261
Score = 100 bits (239), Expect = 3e-22
Identities = 45/58 (77%), Positives = 55/58 (94%)
Frame = +2
Query: 509 AYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGTF 682
AYFND+QRQATKDAGTI+GLNV+RI+NEPTAAAIAYGLDK T E++++++DLGGGTF
Sbjct: 179 AYFNDAQRQATKDAGTIAGLNVIRIVNEPTAAAIAYGLDKTDT-EKHIVVYDLGGGTF 235
Score = 98.3 bits (234), Expect = 1e-21
Identities = 43/57 (75%), Positives = 50/57 (87%)
Frame = +1
Query: 88 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP 258
+GIDLGTTYSCV V ++G+VEIIANDQGNR TPSYVAFT+ ERL+G+AAKNQ NP
Sbjct: 38 IGIDLGTTYSCVAVMKNGRVEIIANDQGNRITPSYVAFTEDERLVGEAAKNQAPSNP 94
>SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 674
Score = 103 bits (246), Expect = 4e-23
Identities = 60/175 (34%), Positives = 90/175 (51%), Gaps = 1/175 (0%)
Frame = +3
Query: 255 PNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSM 434
P NT F KRLIGR+F++ VQ D+K P+++V + KT+ P ++
Sbjct: 110 PENTFFATKRLIGRRFKEPEVQRDIKEVPYKIVEHSNGD---AWLEARGKTYSPSQIGGF 166
Query: 435 VLTKMKETAEAYLGKTVQNAVITVPRTSMTLKDKPQKMQVPSLA*TFSESSMNXXXXXXX 614
+L+KM+ETA YLGK V+NAV+TVP D ++ + A
Sbjct: 167 ILSKMRETASTYLGKDVKNAVVTVP---AYFNDSQRQATKAAGAIAGLNVLRVVNEPTAA 223
Query: 615 XXXXXXXXENEMYLSLTS-AAVPFDVSILTIEDGIFEVKSTAGDTHLGGEALTIA 776
+N+ +++ FD+SIL + +G+FEV+ST GDTHLGGE +A
Sbjct: 224 ALAYGLDKKNDAIVAVFDLGGGTFDISILELNNGVFEVRSTNGDTHLGGEDFDVA 278
Score = 92.7 bits (220), Expect = 5e-20
Identities = 44/58 (75%), Positives = 50/58 (86%)
Frame = +2
Query: 509 AYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGTF 682
AYFNDSQRQATK AG I+GLNVLR++NEPTAAA+AYGLDKK + V +FDLGGGTF
Sbjct: 192 AYFNDSQRQATKAAGAIAGLNVLRVVNEPTAAALAYGLDKK--NDAIVAVFDLGGGTF 247
Score = 73.3 bits (172), Expect = 4e-14
Identities = 34/66 (51%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
Frame = +1
Query: 76 KAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAM 252
K P +GIDLGTT SC+ + + ++IAN +G RTTPS VAFT D ERL+G +AK Q +
Sbjct: 49 KGPVIGIDLGTTTSCLAIMEGQTPKVIANAEGTRTTPSVVAFTKDGERLVGVSAKRQAVI 108
Query: 253 NPTTQY 270
NP +
Sbjct: 109 NPENTF 114
>SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein
Pss1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 51.2 bits (117), Expect = 2e-07
Identities = 21/61 (34%), Positives = 39/61 (63%)
Frame = +1
Query: 73 AKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAM 252
++ VGID G + + + V ++ +++I N+ NR+TPS V++ + R +G+AAK+ A
Sbjct: 3 SRTNVVGIDFGNSKTVIAVARNRAIDVIVNEVSNRSTPSLVSYGERSRFLGEAAKSAEAS 62
Query: 253 N 255
N
Sbjct: 63 N 63
Score = 48.8 bits (111), Expect = 9e-07
Identities = 26/62 (41%), Positives = 36/62 (58%), Gaps = 4/62 (6%)
Frame = +2
Query: 509 AYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGE----RNVLIFDLGGG 676
A+F D QR+A +A I+GLN LR++N+ AAA+ YG+ K E R V I D G
Sbjct: 150 AWFTDIQRRALLEAANIAGLNPLRLMNDNAAAALTYGITKTDLPEPESPRRVAIVDFGHS 209
Query: 677 TF 682
+
Sbjct: 210 NY 211
Score = 41.5 bits (93), Expect = 1e-04
Identities = 43/171 (25%), Positives = 70/171 (40%), Gaps = 6/171 (3%)
Frame = +3
Query: 261 NTIFDAKRLIGRKFEDATVQ-ADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSMV 437
NT+ KRL GR ++D ++ + ++ G KV Y E+ F ++ +
Sbjct: 66 NTVGSLKRLAGRTYDDPEIKDIESNFISAKLTEVDGFVGAKVQYLNEETAFSNIQLIAAY 125
Query: 438 LTKMKETAEAYLGKTVQNAVITVPRTSMTLKDKPQKMQVPSLA*TFSESSMNXXXXXXXX 617
TK+K AEA L +V + VI++P ++ + ++ ++A MN
Sbjct: 126 FTKIKAIAEAELIGSVSDVVISIPAWFTDIQ-RRALLEAANIAGLNPLRLMNDNAAAALT 184
Query: 618 XXXXXXXENEMYLSLTSAAVPF-----DVSILTIEDGIFEVKSTAGDTHLG 755
E A V F VSI+ G F +KST D +LG
Sbjct: 185 YGITKTDLPEPESPRRVAIVDFGHSNYSVSIVEFSRGQFHIKSTVCDRNLG 235
>SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 566
Score = 41.5 bits (93), Expect = 1e-04
Identities = 17/56 (30%), Positives = 31/56 (55%)
Frame = +1
Query: 88 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMN 255
+GI G S + + GK +++AN++GNR PS +++ + G A+ Q+ N
Sbjct: 27 IGISFGNQNSSIAFNRDGKTDVLANEEGNRQIPSILSYHGDQEYHGVQARGQLVRN 82
Score = 38.7 bits (86), Expect = 0.001
Identities = 18/60 (30%), Positives = 34/60 (56%)
Frame = +2
Query: 491 CSYHGSAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLG 670
C YF D+QR+A + A +GL VL++I++P A +A ++ ++ V++ + G
Sbjct: 166 CVMSVPVYFTDAQRKALESAANEAGLPVLQLIHDPAAVILALMYSEEVLIDKTVVVANFG 225
Score = 35.5 bits (78), Expect = 0.009
Identities = 33/177 (18%), Positives = 74/177 (41%), Gaps = 6/177 (3%)
Frame = +3
Query: 258 NNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGED------KTFFPE 419
+N++ + + L+G+ ++ T+ H+ V+ G+ K+ + ++ K
Sbjct: 84 DNSVTNFRDLLGKSHDELTLHHC--HYSANPVNVEGQIGFKITVQEDEESDPKEKILTAH 141
Query: 420 EVSSMVLTKMKETAEAYLGKTVQNAVITVPRTSMTLKDKPQKMQVPSLA*TFSESSMNXX 599
E S L ++ E+AE +LG V V++VP + K + + +
Sbjct: 142 EASVRHLRRLTESAEDFLGTKVNGCVMSVPVYFTDAQRKALESAANEAGLPVLQLIHDPA 201
Query: 600 XXXXXXXXXXXXXENEMYLSLTSAAVPFDVSILTIEDGIFEVKSTAGDTHLGGEALT 770
++ + A +VS+++++ G+ + ++ D +LGGE LT
Sbjct: 202 AVILALMYSEEVLIDKTVVVANFGATRSEVSVVSVKGGLMTILASVHDENLGGEQLT 258
>SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 3971
Score = 35.1 bits (77), Expect = 0.011
Identities = 38/177 (21%), Positives = 79/177 (44%)
Frame = -3
Query: 775 AIVKASPPKWVSPAVDFTSKIPSSMVRMDTSKGTAAEVKDKYISFSSTLFVKTVSNRSSS 596
+++ +S P S ++ ++ I SS V ++ T++ V + +S+ V + + +SS
Sbjct: 796 SVLNSSTPITSSTVLNSSTPITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSS 855
Query: 595 RFIDDSENVQARDGTCIFCGLSLRVIEVRGTVITAFCTVLPR*ASAVSFIFVSTMELTSS 416
++ S + + ++ + T IT+ V S + S+ +TSS
Sbjct: 856 SVLNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSS 915
Query: 415 GKKVLSSPLYATLILGLPPSLTTSKGQCFMSACTVASSNLRPMRRLASNIVLLGSSP 245
S+P+ ++ +L +T+S G + T +SS L + S+ VL S+P
Sbjct: 916 TALNTSTPITSSSVLNSSTPITSSTGLNTSTPIT-SSSVLNSSTPITSSTVLNSSTP 971
Score = 33.9 bits (74), Expect = 0.026
Identities = 38/176 (21%), Positives = 78/176 (44%), Gaps = 1/176 (0%)
Frame = -3
Query: 769 VKASPPKWVSPAVDFTSKIPSSMVRMDTSKGTAAEVKDKYISFSSTLFVKTVSNRSSSRF 590
+ S P S ++ ++ I SS V ++ T++ V + +S+ V T + +SS
Sbjct: 3210 LNTSTPITSSSVLNSSTAITSSSVLNSSTPITSSSVLNSSTPITSSTVVNTSTPITSSSV 3269
Query: 589 IDDSENVQARDGTCIFCGLSLRVIEVRGTVITAFCTVLPR*ASAVSFIFVSTMELTSSGK 410
++ S + + ++ + T IT+ T+ S + S+ +TSS
Sbjct: 3270 LNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTTLNTSTPITSSSVLNSSTAITSSTA 3329
Query: 409 KVLSSPLYATLILGLPPSLTTSKGQCFMSACTVASSN-LRPMRRLASNIVLLGSSP 245
S+P+ ++ +L ++T+S S+ V SS+ L + S+ V+ S+P
Sbjct: 3330 LNTSTPITSSSVLNSSTAITSS--SILNSSTPVTSSSVLNSSTPITSSTVVNSSTP 3383
Score = 32.7 bits (71), Expect = 0.061
Identities = 37/177 (20%), Positives = 77/177 (43%), Gaps = 1/177 (0%)
Frame = -3
Query: 772 IVKASPPKWVSPAVDFTSKIPSSMVRMDTSKGTAAEVKDKYISFSSTLFVKTVSNRSSSR 593
+V +S P S ++ ++ I SS V ++ T++ V + +S+ V T + +SS
Sbjct: 1517 VVNSSTPITSSTVLNTSTPITSSSVLNSSTPITSSSVLNSSTPITSSTVVNTSTPITSSS 1576
Query: 592 FIDDSENVQARDGTCIFCGLSLRVIEVRGTVITAFCTVLPR*ASAVSFIFVSTMELTSSG 413
++ S + + ++ + T IT+ + S + S+ +TSS
Sbjct: 1577 VVNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTALNTSTPITSSSVLNSSTPITSST 1636
Query: 412 KKVLSSPLYATLILGLPPSLTTSKGQCFMSACTVASSN-LRPMRRLASNIVLLGSSP 245
S+P+ ++ L P +T+S S+ + SS + + S+ V+ S+P
Sbjct: 1637 VLNSSTPITSSTALNTSPPITSS--TVVNSSTPITSSTVVNTSTPITSSTVVNSSTP 1691
Score = 28.3 bits (60), Expect = 1.3
Identities = 36/180 (20%), Positives = 78/180 (43%), Gaps = 4/180 (2%)
Frame = -3
Query: 775 AIVKASPPKWVSPAVDFTSKIPSSMVRMDTSKGTAAEVKDKYISFSSTLFVKTVSNRSSS 596
+I+ +S P S ++ ++ I SS V ++ T++ + +S+ + + + +SS
Sbjct: 3352 SILNSSTPVTSSSVLNSSTPITSSTVVNSSTPITSSTALNTSTPITSSSVLNSSTPITSS 3411
Query: 595 RFIDDSENVQARDGTCIFCGLSLRVIEVRGTVITAFCTVLPR*ASAVSFIFVSTMELTSS 416
++ S + + ++ + T IT+ + A A S I S+ +TSS
Sbjct: 3412 TVVNSSTPITSSTALNTSTPITSSTVVNSSTPITSSSVLNSSTAIASSSILNSSTPITSS 3471
Query: 415 GKKVLSSPLYATLILG----LPPSLTTSKGQCFMSACTVASSNLRPMRRLASNIVLLGSS 248
S+P+ ++ ++ + S S +S+ ++ SS L +S+ GSS
Sbjct: 3472 SVLNSSTPISSSTVITSSVVIGSSSVLSYASSIVSSVSLNSSLLSSSGGFSSSAFSTGSS 3531
>SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 848
Score = 30.3 bits (65), Expect = 0.33
Identities = 21/67 (31%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
Frame = +1
Query: 88 VGIDLGTTYSCVGVFQHG-KVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTT 264
+ ID GT ++ + + G +EI+ R S VAF ER+ G A N P
Sbjct: 25 LAIDYGTEWTKAALIKPGIPLEIVLTKDTRRKEQSAVAFKGNERIFGVDASNLATRFPA- 83
Query: 265 QYSMPNV 285
+S+ NV
Sbjct: 84 -HSIRNV 89
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 29.1 bits (62), Expect = 0.75
Identities = 36/156 (23%), Positives = 66/156 (42%)
Frame = -3
Query: 709 SSMVRMDTSKGTAAEVKDKYISFSSTLFVKTVSNRSSSRFIDDSENVQARDGTCIFCGLS 530
SS + +S +++ + + S SS L T S S+S I S + F S
Sbjct: 554 SSSITTISSGISSSSIPSTFSSVSSILSSSTSSPSSTSLSISSSST------SSTFSSAS 607
Query: 529 LRVIEVRGTVITAFCTVLPR*ASAVSFIFVSTMELTSSGKKVLSSPLYATLILGLPPSLT 350
+ I++ T+L + S + +S+ + S +LSS + + + SL+
Sbjct: 608 TSSPSSISSSISSSSTILSSPTPSTSSLMISSSSIISGSSSILSSSIST---IPISSSLS 664
Query: 349 TSKGQCFMSACTVASSNLRPMRRLASNIVLLGSSPP 242
T S+ T+ SS+ + ++S+ V SS P
Sbjct: 665 TYSSSVIPSSSTLVSSSSSLI--VSSSPVASSSSSP 698
>SPAC22G7.06c |ura1||carbamoyl-phosphate synthase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2244
Score = 28.7 bits (61), Expect = 0.99
Identities = 15/45 (33%), Positives = 25/45 (55%)
Frame = +1
Query: 184 PSYVAFTDTERLIGDAAKNQVAMNPTTQYSMPNVSSDVSSKMLLC 318
P +A T ER++ AAK A+N T Y++ ++ D K++ C
Sbjct: 1252 PQDLAPTTIERIVDAAAKIGEALNITGPYNIQFIAKDNEIKVIEC 1296
>SPAC25B8.04c |||mitochondrial splicing suppressor
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 378
Score = 28.7 bits (61), Expect = 0.99
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +2
Query: 80 HPQ*ESIWVPRTLALVSSSTGRWRSSPTTRAT 175
HP S W+P LVS+ W +SP+++ T
Sbjct: 283 HPLYSSSWIPTLHDLVSTRCSVWLTSPSSQRT 314
>SPAC1527.03 |||RNA-binding protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 475
Score = 25.8 bits (54), Expect = 7.0
Identities = 17/61 (27%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
Frame = -3
Query: 757 PPKWVSPAVDFTSKIPSSMVRMDTSKGTA--AEVKDKYISFSSTLFVKTVSNRSSSRFID 584
P W SP + ++ + D+ K A A K+K+++ + +SNR SSR +
Sbjct: 111 PNVWPSPEIA-EKQVEDRKLSDDSQKPLAPKANGKEKWVTITPNFTHTPISNRKSSRSRN 169
Query: 583 D 581
D
Sbjct: 170 D 170
>SPBC776.10c |cog6||Golgi transport complex peripheral subunit Cog6
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 675
Score = 25.8 bits (54), Expect = 7.0
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = +1
Query: 229 AAKNQVAMNPTTQYSMPNVSSDVSSKML 312
A K Q+ +NP + +PNV D + +L
Sbjct: 323 ARKRQIQLNPFPPWDVPNVLEDQMNSLL 350
>SPBC25H2.13c |cdc20|pol2|DNA polymerase epsilon catalytic subunit a
Pol2 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 2199
Score = 25.4 bits (53), Expect = 9.3
Identities = 14/30 (46%), Positives = 15/30 (50%)
Frame = +2
Query: 434 GAYENEGNCRSLSWQNCAECSYHGSAYFND 523
GAY N C +S N A CS SA ND
Sbjct: 1689 GAYSNA--CVDISLSNLALCSILNSALIND 1716
>SPAC1F7.01c |spt6|SPAC694.07c|transcription elongation factor
Spt6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1365
Score = 25.4 bits (53), Expect = 9.3
Identities = 11/44 (25%), Positives = 23/44 (52%)
Frame = -3
Query: 355 LTTSKGQCFMSACTVASSNLRPMRRLASNIVLLGSSPPGSWRHL 224
L S+ + ++S V +RP + + +IV+ GS++H+
Sbjct: 1173 LNASQAEAYLSKMQVGDLVIRPSSKGSDHIVVTWKVAEGSYQHI 1216
>SPAC823.11 |||sphingosine-1-phosphate phosphatase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 411
Score = 25.4 bits (53), Expect = 9.3
Identities = 11/35 (31%), Positives = 19/35 (54%)
Frame = -3
Query: 166 GRWR*SPPSRAGRHQRKSTWYPDRFLLRVLLPFCI 62
G W SP S + H ++++ +F +RVL C+
Sbjct: 276 GTWFASPESLSHLHDNLNSYFLLKFFVRVLFGVCM 310
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,569,325
Number of Sequences: 5004
Number of extensions: 79401
Number of successful extensions: 287
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 250
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 283
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 379359666
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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