Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20383
(783 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_45540| Best HMM Match : HSP70 (HMM E-Value=0) 168 5e-42
SB_8490| Best HMM Match : HSP70 (HMM E-Value=0) 165 3e-41
SB_45647| Best HMM Match : HSP70 (HMM E-Value=0) 142 3e-34
SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.) 132 3e-31
SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.) 71 1e-12
SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36) 70 2e-12
SB_57217| Best HMM Match : Helicase_C (HMM E-Value=0.049) 58 1e-08
SB_38725| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 3e-05
SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 1e-04
SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07) 42 7e-04
SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16) 31 1.1
SB_19421| Best HMM Match : Ribosomal_L36 (HMM E-Value=0.85) 30 1.8
SB_55989| Best HMM Match : zf-C2H2 (HMM E-Value=8e-08) 30 2.4
SB_51671| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.4
SB_24762| Best HMM Match : Astacin (HMM E-Value=0) 29 3.2
SB_45916| Best HMM Match : Cadherin (HMM E-Value=0) 29 3.2
SB_7560| Best HMM Match : Metallothio_PEC (HMM E-Value=1.3) 29 3.2
SB_23942| Best HMM Match : 5-nucleotidase (HMM E-Value=4) 29 5.6
SB_9053| Best HMM Match : TIG (HMM E-Value=0) 29 5.6
SB_24848| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.6
SB_42630| Best HMM Match : Ets (HMM E-Value=0) 28 9.8
SB_13174| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.8
SB_34715| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.8
SB_7343| Best HMM Match : EGF (HMM E-Value=0) 28 9.8
>SB_45540| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1097
Score = 168 bits (408), Expect = 5e-42
Identities = 91/170 (53%), Positives = 108/170 (63%), Gaps = 1/170 (0%)
Frame = +3
Query: 255 PNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSM 434
P NT+FDAKRLIGRKF+D V DM HWPF V+ +G +PKI+V +KGE K+FFPEE+SSM
Sbjct: 63 PENTVFDAKRLIGRKFDDPVVARDMTHWPFHVIREGERPKIQVEFKGEKKSFFPEEISSM 122
Query: 435 VLTKMKETAEAYLGKTVQNAVITVPRTSMTLKDKPQKMQVPSLA*TFSESSMNXXXXXXX 614
VLTKMKETAEAYLG V +AV+TVP + + K ++A +N
Sbjct: 123 VLTKMKETAEAYLGAKVTDAVVTVPAYFHDSQRQATK-DAGTIAGLNVLRIINEPTAAAI 181
Query: 615 XXXXXXXXENEM-YLSLTSAAVPFDVSILTIEDGIFEVKSTAGDTHLGGE 761
E L FDVS+LTIEDGIFEVKSTAGDTHLGGE
Sbjct: 182 AYGLDKKVGVERNVLIYDLGGGTFDVSVLTIEDGIFEVKSTAGDTHLGGE 231
Score = 132 bits (318), Expect = 4e-31
Identities = 61/63 (96%), Positives = 62/63 (98%)
Frame = +1
Query: 70 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 249
MAK PAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAF+DTERLIGDAAKNQVA
Sbjct: 1 MAKTPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFSDTERLIGDAAKNQVA 60
Query: 250 MNP 258
MNP
Sbjct: 61 MNP 63
Score = 108 bits (260), Expect = 4e-24
Identities = 62/92 (67%), Positives = 67/92 (72%), Gaps = 1/92 (1%)
Frame = +2
Query: 509 AYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFR- 685
AYF+DSQRQATKDAGTI+GLNVLRIINEPTAAAIAYGLDKK ERNVLI+DLGGGTF
Sbjct: 148 AYFHDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYGLDKKVGVERNVLIYDLGGGTFDV 207
Query: 686 RVHPYHRGWYLRGEIHRRRHPLGR*GFDNRMV 781
V G + H LG FDN+MV
Sbjct: 208 SVLTIEDGIFEVKSTAGDTH-LGGEDFDNKMV 238
>SB_8490| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 640
Score = 165 bits (402), Expect = 3e-41
Identities = 93/171 (54%), Positives = 111/171 (64%), Gaps = 2/171 (1%)
Frame = +3
Query: 255 PNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSM 434
P NTIFDAKRLIGR+++DATVQ+DMK WPF+++SD KPKI+V YKGE KTF EE+SSM
Sbjct: 63 PENTIFDAKRLIGRRYDDATVQSDMKLWPFKIISDNNKPKIQVEYKGERKTFAAEEISSM 122
Query: 435 VLTKMKETAEAYLGKTVQNAVITVPRTSMTLKDKPQKMQVPSLA*TFSESSMNXXXXXXX 614
VL KMKETAEAYLG+ V +AVITVP + + K ++A +N
Sbjct: 123 VLGKMKETAEAYLGQKVTSAVITVPAYFNDSQRQATK-DAGTIAGLNVLRVINEPTAAAL 181
Query: 615 XXXXXXXXENEM-YLSLTSAAVPFDVSILTIEDG-IFEVKSTAGDTHLGGE 761
E L FDVSILTI+DG +FEVKSTAGDTHLGGE
Sbjct: 182 AYGLDKSLSGEKNVLIFDLGGGTFDVSILTIDDGSLFEVKSTAGDTHLGGE 232
Score = 127 bits (306), Expect = 1e-29
Identities = 57/63 (90%), Positives = 61/63 (96%)
Frame = +1
Query: 70 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 249
M KAPA+GIDLGTTYSCVGVFQ+GKVEIIANDQGNRTTPSYV FTDTERL+GDAAKNQVA
Sbjct: 1 MGKAPAIGIDLGTTYSCVGVFQNGKVEIIANDQGNRTTPSYVGFTDTERLVGDAAKNQVA 60
Query: 250 MNP 258
+NP
Sbjct: 61 LNP 63
Score = 111 bits (266), Expect = 8e-25
Identities = 51/58 (87%), Positives = 56/58 (96%)
Frame = +2
Query: 509 AYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGTF 682
AYFNDSQRQATKDAGTI+GLNVLR+INEPTAAA+AYGLDK +GE+NVLIFDLGGGTF
Sbjct: 148 AYFNDSQRQATKDAGTIAGLNVLRVINEPTAAALAYGLDKSLSGEKNVLIFDLGGGTF 205
>SB_45647| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1327
Score = 142 bits (344), Expect = 3e-34
Identities = 78/169 (46%), Positives = 102/169 (60%)
Frame = +3
Query: 255 PNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSM 434
P NT+FDAKRLIGR ++D +VQ D+K +PF+VV KP ++V K E KTF EE+S+M
Sbjct: 761 PENTVFDAKRLIGRSWDDTSVQNDLKFFPFKVVDKNKKPHVQVKVKDEIKTFAAEEISAM 820
Query: 435 VLTKMKETAEAYLGKTVQNAVITVPRTSMTLKDKPQKMQVPSLA*TFSESSMNXXXXXXX 614
VLTKMKETAEAYLGK V +AV+TVP + + K ++A +N
Sbjct: 821 VLTKMKETAEAYLGKKVTHAVVTVPAYFNDAQRQATK-DAGAIAGLTVMRIINEPTAAAI 879
Query: 615 XXXXXXXXENEMYLSLTSAAVPFDVSILTIEDGIFEVKSTAGDTHLGGE 761
+ L FDVS+LTI++G+FEV +T GDTHLGGE
Sbjct: 880 AYGMDKKEGEKNILVFDLGGGTFDVSLLTIDNGVFEVVATNGDTHLGGE 928
Score = 102 bits (245), Expect = 3e-22
Identities = 47/58 (81%), Positives = 54/58 (93%)
Frame = +2
Query: 509 AYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGTF 682
AYFND+QRQATKDAG I+GL V+RIINEPTAAAIAYG+DKK GE+N+L+FDLGGGTF
Sbjct: 846 AYFNDAQRQATKDAGAIAGLTVMRIINEPTAAAIAYGMDKK-EGEKNILVFDLGGGTF 902
Score = 99 bits (238), Expect = 2e-21
Identities = 46/58 (79%), Positives = 52/58 (89%), Gaps = 1/58 (1%)
Frame = +1
Query: 88 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDT-ERLIGDAAKNQVAMNP 258
+GIDLGTTYSCVGVF++G+VEIIANDQGNR TPSYVAFT+ ERLIGD AKNQ+ NP
Sbjct: 704 IGIDLGTTYSCVGVFKNGRVEIIANDQGNRITPSYVAFTEEGERLIGDGAKNQLTTNP 761
>SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 746
Score = 132 bits (319), Expect = 3e-31
Identities = 60/64 (93%), Positives = 62/64 (96%)
Frame = +1
Query: 70 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 249
M KAPA+GIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTD ERL+GDAAKNQVA
Sbjct: 1 MTKAPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDEERLVGDAAKNQVA 60
Query: 250 MNPT 261
MNPT
Sbjct: 61 MNPT 64
Score = 114 bits (275), Expect = 7e-26
Identities = 65/92 (70%), Positives = 66/92 (71%), Gaps = 1/92 (1%)
Frame = +2
Query: 509 AYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFR- 685
AYFNDSQRQATKDAG ISGLNVLRIINEPTAAAIAYGLDKK ERNVLIFDLGGGTF
Sbjct: 241 AYFNDSQRQATKDAGVISGLNVLRIINEPTAAAIAYGLDKKVGQERNVLIFDLGGGTFDV 300
Query: 686 RVHPYHRGWYLRGEIHRRRHPLGR*GFDNRMV 781
V G + H H LG FDN MV
Sbjct: 301 SVLSIEDGIFEVKSTHGDTH-LGGEDFDNNMV 331
Score = 113 bits (271), Expect = 2e-25
Identities = 63/110 (57%), Positives = 72/110 (65%), Gaps = 25/110 (22%)
Frame = +3
Query: 255 PNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEV--- 425
P NTIFDAKRLIGR+F+D V+ DMKHW FEVV++ G+PK+KV YKGE KTFF EEV
Sbjct: 63 PTNTIFDAKRLIGRRFDDPGVKDDMKHWSFEVVNEAGRPKVKVEYKGETKTFFAEEVVNE 122
Query: 426 ----------------------SSMVLTKMKETAEAYLGKTVQNAVITVP 509
SSMVL KMKETAEAYLG V +AV+TVP
Sbjct: 123 AGRPKVKVEYKGETKTFFAEEISSMVLNKMKETAEAYLGCKVTDAVVTVP 172
Score = 76.6 bits (180), Expect = 2e-14
Identities = 48/114 (42%), Positives = 57/114 (50%)
Frame = +3
Query: 420 EVSSMVLTKMKETAEAYLGKTVQNAVITVPRTSMTLKDKPQKMQVPSLA*TFSESSMNXX 599
++SSMVL KMKETAEAYLG V +AV+TVP + + K
Sbjct: 211 QISSMVLNKMKETAEAYLGCKVTDAVVTVPAYFNDSQRQATKDAGVISGLNVLRIINEPT 270
Query: 600 XXXXXXXXXXXXXENEMYLSLTSAAVPFDVSILTIEDGIFEVKSTAGDTHLGGE 761
+ L FDVS+L+IEDGIFEVKST GDTHLGGE
Sbjct: 271 AAAIAYGLDKKVGQERNVLIFDLGGGTFDVSVLSIEDGIFEVKSTHGDTHLGGE 324
Score = 35.5 bits (78), Expect = 0.049
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +2
Query: 509 AYFNDSQRQATKDAG 553
AYFNDSQRQATKDAG
Sbjct: 173 AYFNDSQRQATKDAG 187
>SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1068
Score = 70.9 bits (166), Expect = 1e-12
Identities = 37/84 (44%), Positives = 51/84 (60%), Gaps = 1/84 (1%)
Frame = +3
Query: 261 NTIFDAKRLIGRKFEDATVQADMKHWPFEVVS-DGGKPKIKVAYKGEDKTFFPEEVSSMV 437
NTI KR IGRKF D VQ ++ H P++VV I+V Y G+ + F PE+V +M+
Sbjct: 121 NTISQFKRFIGRKFSDPAVQKEIPHLPYKVVELPNDSIGIQVQYLGKQEVFSPEQVMAML 180
Query: 438 LTKMKETAEAYLGKTVQNAVITVP 509
T++K TAE L V + VI+VP
Sbjct: 181 FTRLKTTAEIALKTKVTDCVISVP 204
Score = 50.0 bits (114), Expect = 2e-06
Identities = 24/64 (37%), Positives = 38/64 (59%), Gaps = 3/64 (4%)
Frame = +2
Query: 488 ECSYHGSAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKG---TGERNVLI 658
+C +Y+ D QR+ DA +GLN LR++N+ TA ++AYG+ K+ RNV+
Sbjct: 198 DCVISVPSYYTDRQRRCMLDASATAGLNCLRLMNDTTAVSLAYGIYKQDLPTDKPRNVVF 257
Query: 659 FDLG 670
D+G
Sbjct: 258 VDIG 261
Score = 49.6 bits (113), Expect = 3e-06
Identities = 22/52 (42%), Positives = 33/52 (63%)
Frame = +1
Query: 88 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQ 243
VG D+G + V + G +E +AN+ +R TPS+V+ D +RLIG + KNQ
Sbjct: 4 VGFDVGNQSCYIAVARGGGIETVANEFSDRCTPSFVSLGDKQRLIGTSGKNQ 55
>SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36)
Length = 437
Score = 70.1 bits (164), Expect = 2e-12
Identities = 50/170 (29%), Positives = 74/170 (43%), Gaps = 1/170 (0%)
Frame = +3
Query: 255 PNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDG-GKPKIKVAYKGEDKTFFPEEVSS 431
P NTI+DAKR IG+ F + K + F V +D G V KG PEE+
Sbjct: 92 PKNTIYDAKRFIGKTFTKQELLEIGKLYQFRVTTDKRGNAGFLVGKKGNFTVITPEEIGG 151
Query: 432 MVLTKMKETAEAYLGKTVQNAVITVPRTSMTLKDKPQKMQVPSLA*TFSESSMNXXXXXX 611
V+ K++ AE L TV AV++VP +K + ++ SLA +N
Sbjct: 152 YVIKKLRTMAERNLTTTVTKAVMSVP-AEFDIKQRNATVKAASLAGITVLRVINEPTAAA 210
Query: 612 XXXXXXXXXENEMYLSLTSAAVPFDVSILTIEDGIFEVKSTAGDTHLGGE 761
+ + DVS+L I+ G+F + AG+ LGG+
Sbjct: 211 LAYGLHKKEGVANVMVVDLGGGTLDVSLLNIQGGMFVTMAMAGNNRLGGQ 260
Score = 69.7 bits (163), Expect = 2e-12
Identities = 34/57 (59%), Positives = 43/57 (75%)
Frame = +2
Query: 509 AYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGT 679
A F+ QR AT A +++G+ VLR+INEPTAAA+AYGL KK G NV++ DLGGGT
Sbjct: 178 AEFDIKQRNATVKAASLAGITVLRVINEPTAAALAYGLHKK-EGVANVMVVDLGGGT 233
Score = 65.3 bits (152), Expect = 5e-11
Identities = 29/63 (46%), Positives = 43/63 (68%), Gaps = 2/63 (3%)
Frame = +1
Query: 76 KAPAVGIDLGTTYSCVGVFQ--HGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 249
K +GIDLGTTYSCVG +Q G+++I +++ ++ PS VAFTD L+G+ A +Q
Sbjct: 30 KPKIIGIDLGTTYSCVGAYQAISGRIDIFSDENDDKVVPSLVAFTDKGVLVGEKALSQAE 89
Query: 250 MNP 258
+NP
Sbjct: 90 INP 92
>SB_57217| Best HMM Match : Helicase_C (HMM E-Value=0.049)
Length = 179
Score = 57.6 bits (133), Expect = 1e-08
Identities = 40/73 (54%), Positives = 44/73 (60%), Gaps = 26/73 (35%)
Frame = +2
Query: 509 AYFNDSQRQATKDAGTISGLN------------------------VLRIINEPTAAAIAY 616
A+FND+QRQATKDAGTI+GL+ VLRIINEPTAAAIAY
Sbjct: 47 AHFNDAQRQATKDAGTIAGLDVLSRTASERPPSRFRRRRPHGRSRVLRIINEPTAAAIAY 106
Query: 617 GLDKK--GTGERN 649
GLDK G ERN
Sbjct: 107 GLDKARGGKAERN 119
Score = 50.4 bits (115), Expect = 2e-06
Identities = 23/45 (51%), Positives = 34/45 (75%)
Frame = +3
Query: 375 IKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVP 509
I V GE ++F PE++S++VL ++K AEA+LG+ V+ AVITVP
Sbjct: 2 IAVEVCGEKRSFAPEQISAVVLEQLKADAEAFLGQAVKRAVITVP 46
>SB_38725| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 766
Score = 46.0 bits (104), Expect = 3e-05
Identities = 19/27 (70%), Positives = 24/27 (88%)
Frame = +3
Query: 681 FDVSILTIEDGIFEVKSTAGDTHLGGE 761
FD+SIL I+ G+FEVK+T GDT+LGGE
Sbjct: 12 FDISILEIQKGVFEVKATNGDTYLGGE 38
>SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1019
Score = 44.0 bits (99), Expect = 1e-04
Identities = 22/60 (36%), Positives = 38/60 (63%), Gaps = 4/60 (6%)
Frame = +2
Query: 512 YFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKK----GTGERNVLIFDLGGGT 679
+FN ++R+A A + GLNVL+I+N TA A+ YGL ++ T E++ + +D+G +
Sbjct: 115 FFNQAERRALLRAAELVGLNVLQIMNSNTAVALNYGLFQQKSFNDTLEKHFMFYDMGASS 174
Score = 34.3 bits (75), Expect = 0.11
Identities = 16/47 (34%), Positives = 26/47 (55%)
Frame = +3
Query: 369 PKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVP 509
P +K Y+ D TF PEE+ M+L + E + +++ V+TVP
Sbjct: 68 PHVK-NYQQSDVTFTPEELMGMILNHSRFIGEQFADHPIKDVVLTVP 113
>SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07)
Length = 592
Score = 41.5 bits (93), Expect = 7e-04
Identities = 18/28 (64%), Positives = 22/28 (78%)
Frame = +1
Query: 139 GKVEIIANDQGNRTTPSYVAFTDTERLI 222
G IIAND G+R TP+ VAF+DTE+LI
Sbjct: 83 GNTTIIANDAGDRVTPAMVAFSDTEKLI 110
>SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16)
Length = 212
Score = 31.1 bits (67), Expect = 1.1
Identities = 15/25 (60%), Positives = 20/25 (80%), Gaps = 1/25 (4%)
Frame = +1
Query: 148 EIIANDQGNRTTPSYVAFT-DTERL 219
++I N +G+RTTPS VAFT + ERL
Sbjct: 7 KVIENAEGSRTTPSVVAFTPEGERL 31
>SB_19421| Best HMM Match : Ribosomal_L36 (HMM E-Value=0.85)
Length = 647
Score = 30.3 bits (65), Expect = 1.8
Identities = 17/45 (37%), Positives = 25/45 (55%)
Frame = +2
Query: 623 DKKGTGERNVLIFDLGGGTFRRVHPYHRGWYLRGEIHRRRHPLGR 757
D+ T +R++ + DLG T +++H HR G I RR H L R
Sbjct: 363 DRGMTRQRSISMHDLGHETIQKIHFRHRASISHG-IERRVHELLR 406
>SB_55989| Best HMM Match : zf-C2H2 (HMM E-Value=8e-08)
Length = 1011
Score = 29.9 bits (64), Expect = 2.4
Identities = 17/62 (27%), Positives = 28/62 (45%)
Frame = +3
Query: 366 KPKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPRTSMTLKDKPQK 545
+PK K + E+ EE +M ++K LGK V+ + T ++TL + Q
Sbjct: 654 QPKFKKTKEEEEFDKLLEEADAMTQQEVKNVKNIKLGKNVKTQLYTCEPCNITLNSQKQM 713
Query: 546 MQ 551
Q
Sbjct: 714 SQ 715
>SB_51671| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 665
Score = 29.9 bits (64), Expect = 2.4
Identities = 21/75 (28%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Frame = +3
Query: 57 LKIQNGKSTRSRN-RSGYHVLLRWCLPAREGGDHRQRPGQQDHSVLCCVHRHRASHRRCR 233
L++ N + ++ + R GY L R C R + +R + H++L R +RC
Sbjct: 225 LRLVNTRDDKTHDKRPGYRKLSRVC-GGRRPNEPYERTARV-HTILSTETETRFCAKRCA 282
Query: 234 QEPGGDEPNNTIFDA 278
G +P NT F+A
Sbjct: 283 GTASGMDPKNTPFNA 297
>SB_24762| Best HMM Match : Astacin (HMM E-Value=0)
Length = 733
Score = 29.5 bits (63), Expect = 3.2
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = -2
Query: 551 LHLLWLVFESH*STRNRDNCILHSFAKIS 465
++ LWL F + S+ + D C+LHS A ++
Sbjct: 415 IYTLWLDFSRYYSSASSDICVLHSIAHLA 443
>SB_45916| Best HMM Match : Cadherin (HMM E-Value=0)
Length = 1774
Score = 29.5 bits (63), Expect = 3.2
Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Frame = -3
Query: 772 IVKASPPKWVSPAVDFTSKIPSSMVRMDTSKGTAAEVK-DKYISFSSTLFVKTVSNRSSS 596
I + PP + PA D T I + + T + +K ISF +LF+ VSN S+
Sbjct: 714 ITRHPPPFLLEPA-DVTISINLTCAALSAHDITYKWLHGNKVISFGPSLFMDKVSNASAG 772
Query: 595 RFIDDSEN 572
R+I +E+
Sbjct: 773 RYICIAES 780
>SB_7560| Best HMM Match : Metallothio_PEC (HMM E-Value=1.3)
Length = 350
Score = 29.5 bits (63), Expect = 3.2
Identities = 16/33 (48%), Positives = 19/33 (57%)
Frame = -3
Query: 256 GSSPPGSWRHLR*DARCL*TQHKTEWSCCPGRW 158
GS PPG W R +AR T +T +SC PG W
Sbjct: 206 GSCPPGFWCRKRREARAA-TDLET-YSCPPGFW 236
>SB_23942| Best HMM Match : 5-nucleotidase (HMM E-Value=4)
Length = 735
Score = 28.7 bits (61), Expect = 5.6
Identities = 16/36 (44%), Positives = 19/36 (52%)
Frame = +2
Query: 641 ERNVLIFDLGGGTFRRVHPYHRGWYLRGEIHRRRHP 748
+R VL FD +HP+ RGWY R E R HP
Sbjct: 521 KRAVLAFDELIMAAAGLHPFQRGWYRRCE--RFHHP 554
>SB_9053| Best HMM Match : TIG (HMM E-Value=0)
Length = 2990
Score = 28.7 bits (61), Expect = 5.6
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +1
Query: 16 HVC*VVLRTSNKTD*KYKMAKAPAVGIDL 102
HVC +V T K K ++K PA GI+L
Sbjct: 1200 HVCNIVSNTETKITCKLDVSKTPAPGIEL 1228
>SB_24848| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1506
Score = 28.7 bits (61), Expect = 5.6
Identities = 20/68 (29%), Positives = 32/68 (47%)
Frame = -3
Query: 463 SAVSFIFVSTMELTSSGKKVLSSPLYATLILGLPPSLTTSKGQCFMSACTVASSNLRPMR 284
S F+F ST + +S +KV+ SPL + + P+ G S C V NL
Sbjct: 1108 SPAKFVFTSTGIVRASTRKVVPSPLRRSKVPPTVPAQRLFNGDRVESICNV--QNLSRCP 1165
Query: 283 RLASNIVL 260
++++ VL
Sbjct: 1166 KISNATVL 1173
>SB_42630| Best HMM Match : Ets (HMM E-Value=0)
Length = 631
Score = 27.9 bits (59), Expect = 9.8
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = +2
Query: 98 IWVPRTLALVSSSTGRWRSSPTTRATGPLRLMLRSQTPSVSSEMPPRT 241
IW P+ L++S R+S + PLR L P VSS +P T
Sbjct: 42 IWPPKKQHLMASYPSTSRASASRSHLFPLRTGLPPVPPLVSSPLPSPT 89
>SB_13174| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1108
Score = 27.9 bits (59), Expect = 9.8
Identities = 19/71 (26%), Positives = 34/71 (47%)
Frame = +1
Query: 511 VLQ*LSKTSHKRCRYHLWLERSPNHQ*TDCCCDCLRS*QKGYWRTKCTYL*PRRRYLSTC 690
+++ L H R R R+PNH D +S +G W+++ R+R+ +C
Sbjct: 718 IIKKLLMNLHVRLRRWRRESRAPNHPRPDLNT-LDKSKPEGAWQSRTELTERRKRHFVSC 776
Query: 691 PSLPSRMVSSR 723
+L R ++SR
Sbjct: 777 NTLSRRSLASR 787
>SB_34715| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 977
Score = 27.9 bits (59), Expect = 9.8
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = +2
Query: 98 IWVPRTLALVSSSTGRWRSSPTTRATGPLRLMLRSQTPSVSSEMPPRT 241
IW P+ L++S R+S + PLR L P VSS +P T
Sbjct: 388 IWPPKKQHLMASYPSTSRASASRSHLFPLRTGLPPVPPLVSSPLPSPT 435
>SB_7343| Best HMM Match : EGF (HMM E-Value=0)
Length = 1233
Score = 27.9 bits (59), Expect = 9.8
Identities = 17/72 (23%), Positives = 29/72 (40%)
Frame = +1
Query: 109 TYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTTQYSMPNVS 288
T++ + H I+ N G +TP + T A + + M PT V+
Sbjct: 559 THTTTSITLHPSSAILDNSLGPASTPRTTISSTTHVSSTPIASSSMVMTPTAINPSATVT 618
Query: 289 SDVSSKMLLCKP 324
+ V S ++ KP
Sbjct: 619 TTVPSTSVVVKP 630
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,170,673
Number of Sequences: 59808
Number of extensions: 673697
Number of successful extensions: 2013
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1801
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1994
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2143884611
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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