Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20382
(735 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 191 4e-49
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 191 4e-49
SB_56| Best HMM Match : Actin (HMM E-Value=0) 191 4e-49
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 191 4e-49
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 191 4e-49
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 153 1e-37
SB_3885| Best HMM Match : Actin (HMM E-Value=0.77) 148 4e-36
SB_54| Best HMM Match : Actin (HMM E-Value=0) 124 8e-29
SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) 109 2e-24
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 106 2e-23
SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12) 60 2e-09
SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10) 59 4e-09
SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) 58 7e-09
SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6) 56 2e-08
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 56 4e-08
SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 5e-04
SB_39550| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.034
SB_39781| Best HMM Match : cNMP_binding (HMM E-Value=2.2e-19) 36 0.034
SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.060
SB_29576| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.10
SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011) 34 0.10
SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.24
SB_55640| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.32
SB_34189| Best HMM Match : MAM (HMM E-Value=5.60519e-45) 33 0.32
SB_33205| Best HMM Match : Mucin (HMM E-Value=0.0024) 32 0.42
SB_34754| Best HMM Match : TSP_1 (HMM E-Value=7.4e-12) 32 0.55
SB_7913| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.55
SB_257| Best HMM Match : Tetraspannin (HMM E-Value=1.5) 32 0.55
SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.73
SB_37084| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.73
SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8) 31 0.73
SB_11571| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_13398| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_8780| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_45934| Best HMM Match : Gp-FAR-1 (HMM E-Value=2) 30 1.7
SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_29252| Best HMM Match : Cytadhesin_P30 (HMM E-Value=1.4) 30 1.7
SB_8336| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.84) 30 1.7
SB_27518| Best HMM Match : RWD (HMM E-Value=0.015) 30 1.7
SB_18296| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_11585| Best HMM Match : TPR_MLP1_2 (HMM E-Value=2.2) 30 1.7
SB_18737| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.2
SB_58934| Best HMM Match : TPR_1 (HMM E-Value=3.8e-37) 30 2.2
SB_51831| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_45111| Best HMM Match : rve (HMM E-Value=1.2e-24) 29 3.0
SB_30534| Best HMM Match : EGF (HMM E-Value=0.12) 29 3.0
SB_16360| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_53581| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_35402| Best HMM Match : Collagen (HMM E-Value=0.39) 29 3.0
SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.9
SB_11738| Best HMM Match : SH3_2 (HMM E-Value=3.7e-32) 29 3.9
SB_58974| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.9
SB_23620| Best HMM Match : Pentapeptide_2 (HMM E-Value=0.74) 29 5.2
SB_20112| Best HMM Match : EGF (HMM E-Value=0) 29 5.2
SB_19751| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.2
SB_6983| Best HMM Match : rve (HMM E-Value=0.011) 29 5.2
SB_46336| Best HMM Match : DUF1518 (HMM E-Value=5.6) 29 5.2
SB_9336| Best HMM Match : Taeniidae_ag (HMM E-Value=0.9) 29 5.2
SB_8083| Best HMM Match : Lectin_C (HMM E-Value=3.8e-22) 29 5.2
SB_45078| Best HMM Match : ABC_tran (HMM E-Value=2.6e-36) 28 6.8
SB_37008| Best HMM Match : MAM (HMM E-Value=1.3999e-42) 28 6.8
SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.8
SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.8
SB_10665| Best HMM Match : PT (HMM E-Value=6.2) 28 6.8
SB_7693| Best HMM Match : 7tm_1 (HMM E-Value=5.3e-09) 28 6.8
SB_6096| Best HMM Match : Chitin_bind_3 (HMM E-Value=1.9e-06) 28 6.8
SB_42612| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.8
SB_40272| Best HMM Match : Tymo_45kd_70kd (HMM E-Value=2.4) 28 6.8
SB_36275| Best HMM Match : Extensin_2 (HMM E-Value=0.062) 28 6.8
SB_28937| Best HMM Match : 7tm_1 (HMM E-Value=2.1e-08) 28 6.8
SB_146| Best HMM Match : DUF836 (HMM E-Value=1.5) 28 6.8
SB_46680| Best HMM Match : Helicase_C (HMM E-Value=3.8e-22) 28 9.0
SB_8208| Best HMM Match : ShTK (HMM E-Value=1.2e-21) 28 9.0
SB_3565| Best HMM Match : ASC (HMM E-Value=1.1e-12) 28 9.0
SB_40582| Best HMM Match : Kazal_1 (HMM E-Value=0) 28 9.0
SB_11044| Best HMM Match : FMO-like (HMM E-Value=3.4) 28 9.0
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 191 bits (466), Expect = 4e-49
Identities = 87/95 (91%), Positives = 88/95 (92%)
Frame = +1
Query: 232 GKAPPSGRMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR 411
G+ G MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR
Sbjct: 37 GRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR 96
Query: 412 VAPEEHPVLLTEAPLNPKANREKMTQIMFETFTRP 516
VAPEEHPVLLTEAPLNPKANREKMTQIMFETF P
Sbjct: 97 VAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSP 131
Score = 153 bits (370), Expect = 2e-37
Identities = 71/76 (93%), Positives = 76/76 (100%)
Frame = +3
Query: 507 HTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD 686
++PAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAI+RLDLAGRDLTD
Sbjct: 129 NSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAIIRLDLAGRDLTD 188
Query: 687 YLMKILTERGYSFTTT 734
YLMKILTERGYSFTTT
Sbjct: 189 YLMKILTERGYSFTTT 204
Score = 89.8 bits (213), Expect = 2e-18
Identities = 40/43 (93%), Positives = 42/43 (97%)
Frame = +2
Query: 125 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 253
M D+E+AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 1 MEDDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 191 bits (466), Expect = 4e-49
Identities = 87/95 (91%), Positives = 88/95 (92%)
Frame = +1
Query: 232 GKAPPSGRMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR 411
G+ G MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR
Sbjct: 36 GRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR 95
Query: 412 VAPEEHPVLLTEAPLNPKANREKMTQIMFETFTRP 516
VAPEEHPVLLTEAPLNPKANREKMTQIMFETF P
Sbjct: 96 VAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSP 130
Score = 153 bits (372), Expect = 1e-37
Identities = 72/76 (94%), Positives = 76/76 (100%)
Frame = +3
Query: 507 HTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD 686
++PAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTD
Sbjct: 128 NSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTD 187
Query: 687 YLMKILTERGYSFTTT 734
YLMKILTERGYSFTTT
Sbjct: 188 YLMKILTERGYSFTTT 203
Score = 87.0 bits (206), Expect = 1e-17
Identities = 38/41 (92%), Positives = 41/41 (100%)
Frame = +2
Query: 131 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 253
+++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 2 EDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 42
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 191 bits (466), Expect = 4e-49
Identities = 87/95 (91%), Positives = 88/95 (92%)
Frame = +1
Query: 232 GKAPPSGRMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR 411
G+ G MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR
Sbjct: 36 GRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR 95
Query: 412 VAPEEHPVLLTEAPLNPKANREKMTQIMFETFTRP 516
VAPEEHPVLLTEAPLNPKANREKMTQIMFETF P
Sbjct: 96 VAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSP 130
Score = 153 bits (372), Expect = 1e-37
Identities = 72/76 (94%), Positives = 76/76 (100%)
Frame = +3
Query: 507 HTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD 686
++PAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTD
Sbjct: 128 NSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTD 187
Query: 687 YLMKILTERGYSFTTT 734
YLMKILTERGYSFTTT
Sbjct: 188 YLMKILTERGYSFTTT 203
Score = 88.2 bits (209), Expect = 6e-18
Identities = 39/41 (95%), Positives = 41/41 (100%)
Frame = +2
Query: 131 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 253
++EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 2 EDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 42
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 191 bits (466), Expect = 4e-49
Identities = 87/95 (91%), Positives = 88/95 (92%)
Frame = +1
Query: 232 GKAPPSGRMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR 411
G+ G MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR
Sbjct: 37 GRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR 96
Query: 412 VAPEEHPVLLTEAPLNPKANREKMTQIMFETFTRP 516
VAPEEHPVLLTEAPLNPKANREKMTQIMFETF P
Sbjct: 97 VAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSP 131
Score = 153 bits (372), Expect = 1e-37
Identities = 72/76 (94%), Positives = 76/76 (100%)
Frame = +3
Query: 507 HTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD 686
++PAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTD
Sbjct: 129 NSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTD 188
Query: 687 YLMKILTERGYSFTTT 734
YLMKILTERGYSFTTT
Sbjct: 189 YLMKILTERGYSFTTT 204
Score = 94.3 bits (224), Expect = 9e-20
Identities = 41/43 (95%), Positives = 43/43 (100%)
Frame = +2
Query: 125 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 253
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 191 bits (466), Expect = 4e-49
Identities = 87/95 (91%), Positives = 88/95 (92%)
Frame = +1
Query: 232 GKAPPSGRMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR 411
G+ G MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR
Sbjct: 37 GRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR 96
Query: 412 VAPEEHPVLLTEAPLNPKANREKMTQIMFETFTRP 516
VAPEEHPVLLTEAPLNPKANREKMTQIMFETF P
Sbjct: 97 VAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSP 131
Score = 89.8 bits (213), Expect = 2e-18
Identities = 38/43 (88%), Positives = 42/43 (97%)
Frame = +2
Query: 125 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 253
M D+++AALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 1 MADDDIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
Score = 81.0 bits (191), Expect = 9e-16
Identities = 39/45 (86%), Positives = 43/45 (95%), Gaps = 2/45 (4%)
Frame = +3
Query: 507 HTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYE--GYA 635
++PAMYVAIQAVLSLYASGRTTGIV+DSGDGVSHTVPIYE GY+
Sbjct: 129 NSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVSHTVPIYEERGYS 173
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 153 bits (371), Expect = 1e-37
Identities = 73/87 (83%), Positives = 80/87 (91%), Gaps = 2/87 (2%)
Frame = +3
Query: 480 DDPDHV--RNIHTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAIL 653
DD + + ++PAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAI+
Sbjct: 80 DDMEKIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAII 139
Query: 654 RLDLAGRDLTDYLMKILTERGYSFTTT 734
RLDLAGRDLTDYLMKILTERGYSFTTT
Sbjct: 140 RLDLAGRDLTDYLMKILTERGYSFTTT 166
Score = 99 bits (238), Expect = 2e-21
Identities = 46/55 (83%), Positives = 47/55 (85%)
Frame = +1
Query: 232 GKAPPSGRMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTF 396
G+ G MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI TF
Sbjct: 36 GRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIMFETF 90
Score = 88.2 bits (209), Expect = 6e-18
Identities = 38/41 (92%), Positives = 41/41 (100%)
Frame = +2
Query: 131 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 253
D++VAALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 2 DDDVAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 42
>SB_3885| Best HMM Match : Actin (HMM E-Value=0.77)
Length = 152
Score = 148 bits (359), Expect = 4e-36
Identities = 68/76 (89%), Positives = 74/76 (97%)
Frame = +3
Query: 507 HTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD 686
++PA+YVAIQAVLSLYASGRTTG+V DSGDGVSH VPIYEGYALPHAILRLDLAGRDLTD
Sbjct: 7 NSPAVYVAIQAVLSLYASGRTTGVVFDSGDGVSHNVPIYEGYALPHAILRLDLAGRDLTD 66
Query: 687 YLMKILTERGYSFTTT 734
YLMK++TERGYSFTTT
Sbjct: 67 YLMKLMTERGYSFTTT 82
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 124 bits (299), Expect = 8e-29
Identities = 54/78 (69%), Positives = 66/78 (84%)
Frame = +3
Query: 501 NIHTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDL 680
+ + P MYVA+QAV++LYASGRTTG V D GDGVSHTVP+Y+GY LPHA R+DLAGRDL
Sbjct: 2171 SFNVPCMYVAVQAVMALYASGRTTGTVFDCGDGVSHTVPVYDGYWLPHATQRIDLAGRDL 2230
Query: 681 TDYLMKILTERGYSFTTT 734
T YL +++TERGYSF +T
Sbjct: 2231 THYLQRLVTERGYSFQST 2248
Score = 67.3 bits (157), Expect = 1e-11
Identities = 30/47 (63%), Positives = 37/47 (78%)
Frame = +1
Query: 376 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFTRP 516
K+W H F ++LRV E+ PVLLTEAPLNPK NRE+M Q+MFE+F P
Sbjct: 2130 KMWEHAF-DQLRVRGEDFPVLLTEAPLNPKMNRERMVQLMFESFNVP 2175
Score = 59.7 bits (138), Expect = 2e-09
Identities = 23/34 (67%), Positives = 30/34 (88%)
Frame = +2
Query: 149 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 250
+V+DNGSG CKAG + D++PR VFP+IVGRPRH+
Sbjct: 2097 VVIDNGSGFCKAGLSTDESPRVVFPAIVGRPRHK 2130
>SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)
Length = 367
Score = 109 bits (263), Expect = 2e-24
Identities = 45/73 (61%), Positives = 65/73 (89%)
Frame = +3
Query: 507 HTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD 686
+ PA+++++QAVLSLYA+GRTTG+VLD+GDGVSH+VPIYEG+A+PH+I+R D+AGRD++
Sbjct: 154 NVPALFISMQAVLSLYATGRTTGVVLDAGDGVSHSVPIYEGFAMPHSIMRTDIAGRDVSR 213
Query: 687 YLMKILTERGYSF 725
YL +L + G+ F
Sbjct: 214 YLRLLLRKEGHCF 226
Score = 52.0 bits (119), Expect = 5e-07
Identities = 21/31 (67%), Positives = 25/31 (80%)
Frame = +1
Query: 424 EHPVLLTEAPLNPKANREKMTQIMFETFTRP 516
+HPVLLTEAPLNP+ NREK ++ FETF P
Sbjct: 126 QHPVLLTEAPLNPRRNREKAAEVFFETFNVP 156
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 106 bits (255), Expect = 2e-23
Identities = 46/78 (58%), Positives = 60/78 (76%)
Frame = +3
Query: 501 NIHTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDL 680
N +Y+AIQAVL+LYA G TG+V+DSGDGV+H P+YEG+ALPH RLD+AGRD+
Sbjct: 130 NYQFEGVYIAIQAVLTLYAQGLLTGVVIDSGDGVTHICPVYEGFALPHLTRRLDIAGRDI 189
Query: 681 TDYLMKILTERGYSFTTT 734
T YL+K++ RGY+F T
Sbjct: 190 TKYLIKLMLLRGYAFNHT 207
Score = 91.5 bits (217), Expect = 6e-19
Identities = 40/79 (50%), Positives = 55/79 (69%), Gaps = 1/79 (1%)
Frame = +1
Query: 274 KDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEA 450
KD VGDEA R +L + YP+++GIV NWDDM+ +W +TF +++ + P VLLTE
Sbjct: 53 KDLMVGDEASQLRYMLEVNYPMDNGIVRNWDDMKHVWDYTFGESKMNIDPRNTKVLLTEP 112
Query: 451 PLNPKANREKMTQIMFETF 507
PLNP NREKM ++MFE +
Sbjct: 113 PLNPMKNREKMIEVMFENY 131
Score = 44.8 bits (101), Expect = 7e-05
Identities = 19/43 (44%), Positives = 27/43 (62%)
Frame = +2
Query: 143 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGGWSVWD 271
+ +V DNG+G K G+AG + P +FPS+VGRP + V D
Sbjct: 7 SVIVCDNGTGFVKCGYAGSNFPAHIFPSMVGRPIIRSSQKVGD 49
>SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12)
Length = 1392
Score = 59.7 bits (138), Expect = 2e-09
Identities = 27/39 (69%), Positives = 29/39 (74%)
Frame = +2
Query: 134 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 250
E LV+D GS M K GFAGDDAP+ VFP IVGRPRHQ
Sbjct: 1354 EAPTPLVIDVGSHMWKVGFAGDDAPKGVFPPIVGRPRHQ 1392
>SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10)
Length = 543
Score = 58.8 bits (136), Expect = 4e-09
Identities = 32/70 (45%), Positives = 46/70 (65%), Gaps = 8/70 (11%)
Frame = +3
Query: 528 AIQAVLSLYASG-------RT-TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLT 683
A +AVL+L AS RT TG V+DSGDGV+H +P+ EGY + I + +AGRD+T
Sbjct: 40 ATKAVLALAASWTSRQVGERTLTGCVIDSGDGVTHVIPVAEGYVIGSCIKHIPIAGRDIT 99
Query: 684 DYLMKILTER 713
++ ++L ER
Sbjct: 100 FFVQQLLRER 109
>SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)
Length = 921
Score = 58.0 bits (134), Expect = 7e-09
Identities = 29/68 (42%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Frame = +3
Query: 534 QAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKIL-TE 710
Q LSLYASG T G+ L SG + IYEG+ L H + L++ G LT+ L + L +
Sbjct: 767 QLSLSLYASGMTLGVCLSSGFSCTQAAVIYEGHTLNHTLQTLEIGGHHLTENLKQYLRDQ 826
Query: 711 RGYSFTTT 734
RG++FT++
Sbjct: 827 RGHNFTSS 834
Score = 47.6 bits (108), Expect = 1e-05
Identities = 20/42 (47%), Positives = 28/42 (66%)
Frame = +2
Query: 119 FKMCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPR 244
FK+ A+V+DNG G+ K GFAGD PR + P++VG P+
Sbjct: 693 FKLDSHYNRAIVLDNGCGISKIGFAGDRVPRIIQPAVVGNPQ 734
>SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6)
Length = 372
Score = 56.4 bits (130), Expect = 2e-08
Identities = 26/60 (43%), Positives = 34/60 (56%)
Frame = +1
Query: 262 GMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 441
G+ D ++GDEA K T K+PI H IV +WD ME+ W + LR PE+H LL
Sbjct: 278 GVEDLDFFIGDEAIDKPSYAT-KWPIRHAIVEDWDLMERFWEQCIFKYLRAEPEDHYFLL 336
Score = 32.3 bits (70), Expect = 0.42
Identities = 11/17 (64%), Positives = 15/17 (88%)
Frame = +3
Query: 570 TGIVLDSGDGVSHTVPI 620
TG V+DSGDGV+H +P+
Sbjct: 356 TGCVIDSGDGVTHVIPV 372
>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
Length = 240
Score = 55.6 bits (128), Expect = 4e-08
Identities = 25/68 (36%), Positives = 43/68 (63%)
Frame = +3
Query: 507 HTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD 686
+ PA ++ +VL+ +A+GR+ G+V+DSG + VP+++GY L AI+R LAG +T
Sbjct: 61 NVPAFFLCKNSVLTAFANGRSNGLVIDSGATQTSAVPVHDGYVLQQAIVRSPLAGDFITA 120
Query: 687 YLMKILTE 710
++ E
Sbjct: 121 QCRQMFEE 128
Score = 54.4 bits (125), Expect = 9e-08
Identities = 22/61 (36%), Positives = 38/61 (62%)
Frame = +1
Query: 334 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFTR 513
PI+ G++ +WD EKI + + ++ HP+L++EA N + REK+T++MFE +
Sbjct: 3 PIKDGMIEDWDLFEKILDYIYSKNIKSDSALHPLLMSEAAWNTRIKREKLTELMFEKYNV 62
Query: 514 P 516
P
Sbjct: 63 P 63
>SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 198
Score = 41.9 bits (94), Expect = 5e-04
Identities = 21/39 (53%), Positives = 27/39 (69%)
Frame = -3
Query: 247 MAGPSHDRGEHGARSIISCETGLAHTGAIVYYQRGNFFV 131
MA + D GE+G+ SI+S ETGLAHTGAI+ Q + V
Sbjct: 1 MARSADDGGENGSGSIVSGETGLAHTGAIIDNQSCDIIV 39
>SB_39550| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 158
Score = 35.9 bits (79), Expect = 0.034
Identities = 22/74 (29%), Positives = 28/74 (37%)
Frame = +1
Query: 430 PVLLTEAPLNPKANREKMTQIMFETFTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPT 609
P T P P T +T P SP+ P P P + TP T +PT
Sbjct: 29 PTPTTHTPTKPSPTTPTSTAPT-QTTPTPTTPSPTAPTQTTPTPATPTPTTPTPKTPTPT 87
Query: 610 PCPSTKDTHSPTPS 651
TK T + TP+
Sbjct: 88 TSTLTKPTPATTPT 101
Score = 32.7 bits (71), Expect = 0.32
Identities = 23/74 (31%), Positives = 31/74 (41%), Gaps = 4/74 (5%)
Frame = +1
Query: 442 TEAPLNPKANREKMTQIMFETFTRP-PCTSPS--KPCSRCTRPVVPPVSCWTPATVSP-T 609
T A P K T T+P P T+P+ KP P P + TP +P T
Sbjct: 70 TPATPTPTTPTPKTPTPTTSTLTKPTPATTPTPTKPTPTAHTPTTPTPTAHTPTKPTPKT 129
Query: 610 PCPSTKDTHSPTPS 651
P P+T + TP+
Sbjct: 130 PTPTTPTPTAHTPT 143
Score = 31.1 bits (67), Expect = 0.97
Identities = 21/72 (29%), Positives = 24/72 (33%)
Frame = +1
Query: 430 PVLLTEAPLNPKANREKMTQIMFETFTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPT 609
P T P P TQ T P T K + T + P TP PT
Sbjct: 49 PTQTTPTPTTPSPTAP--TQTTPTPATPTPTTPTPKTPTPTTSTLTKPTPATTPTPTKPT 106
Query: 610 PCPSTKDTHSPT 645
P T T +PT
Sbjct: 107 PTAHTPTTPTPT 118
Score = 28.7 bits (61), Expect = 5.2
Identities = 12/36 (33%), Positives = 17/36 (47%)
Frame = +1
Query: 502 TFTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPT 609
T P +P+KP + P P + TP T +PT
Sbjct: 113 TTPTPTAHTPTKPTPKTPTPTTPTPTAHTPTTPTPT 148
>SB_39781| Best HMM Match : cNMP_binding (HMM E-Value=2.2e-19)
Length = 1211
Score = 35.9 bits (79), Expect = 0.034
Identities = 23/79 (29%), Positives = 34/79 (43%), Gaps = 3/79 (3%)
Frame = +1
Query: 388 HTFYNELRVAPEEHP---VLLTEAPLNPKANREKMTQIMFETFTRPPCTSPSKPCSRCTR 558
H+ + + +P HP LL + +P + F T + PC SPS P
Sbjct: 464 HSHPSPSQPSPVSHPPAQALLHTSHPSPATHPSPKPCFTFLTLSTKPCFSPSNPSPASH- 522
Query: 559 PVVPPVSCWTPATVSPTPC 615
+ P C+T T+SP PC
Sbjct: 523 --LSPKPCFTSLTLSPKPC 539
Score = 30.7 bits (66), Expect = 1.3
Identities = 16/37 (43%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Frame = +1
Query: 508 TRP-PCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPC 615
T P P T PS P C + P C+T T+SP PC
Sbjct: 667 THPSPATHPS-PSQPCPATHLSPKPCFTFVTLSPKPC 702
Score = 28.7 bits (61), Expect = 5.2
Identities = 22/81 (27%), Positives = 33/81 (40%), Gaps = 4/81 (4%)
Frame = +1
Query: 382 WHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFTRPPC----TSPSKPCSR 549
++H + +P HP P + + T F T + PC T +KPC
Sbjct: 659 FNHALLHTTHPSPATHPSPSQPCPATHLSPKPCFT---FVTLSPKPCFTFLTLSTKPCF- 714
Query: 550 CTRPVVPPVSCWTPATVSPTP 612
T + C+TP T+SP P
Sbjct: 715 -TPLTLSTKLCFTPLTLSPKP 734
>SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2870
Score = 35.1 bits (77), Expect = 0.060
Identities = 17/46 (36%), Positives = 20/46 (43%)
Frame = +1
Query: 514 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 651
PP P P + TRP VP +T PTP P T P P+
Sbjct: 919 PPPLPPPPPPIQTTRPTVPTTPTTQASTTRPTPPPPTSALPPPIPA 964
Score = 27.9 bits (59), Expect = 9.0
Identities = 10/23 (43%), Positives = 11/23 (47%)
Frame = +1
Query: 514 PPCTSPSKPCSRCTRPVVPPVSC 582
PP P P T P +PP SC
Sbjct: 973 PPLPPPPPPVQTTTAPTLPPASC 995
>SB_29576| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1202
Score = 34.3 bits (75), Expect = 0.10
Identities = 20/48 (41%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Frame = +1
Query: 514 PPCTSP-SKPCSRCTRPVVPPVSCWTPATVSPTP-CPSTKDTHSPTPS 651
P TSP + P +R P+ PP C + V PTP S+K + SP+PS
Sbjct: 316 PAFTSPPNTPTTRTFSPISPPAGC-AASPVPPTPPAISSKRSFSPSPS 362
>SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011)
Length = 580
Score = 34.3 bits (75), Expect = 0.10
Identities = 14/43 (32%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
Frame = +1
Query: 283 YVGDEAQSKRGILTLKY--PIEHGIVTNWDDMEKIWHHTFYNE 405
++GD+ + + L Y P + G + NWD ++IW +TF E
Sbjct: 273 FIGDQIEECKDYSALFYVLPFQKGFLVNWDVEKQIWDYTFGKE 315
Score = 27.9 bits (59), Expect = 9.0
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = +2
Query: 137 EVAALVVDNGSGMCKAGFAGDDAPRAV 217
++A LV+D G+ K GFA + APR++
Sbjct: 232 KMATLVLDCGACSQKIGFASNQAPRSI 258
>SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 220
Score = 33.1 bits (72), Expect = 0.24
Identities = 26/84 (30%), Positives = 43/84 (51%), Gaps = 7/84 (8%)
Frame = +1
Query: 247 SGRMVGM-GQKDS---YVGDEAQSKRGIL-TLKYPIEHGIVTNWDDMEKIWHHTFYNELR 411
SG++ G G+ DS VG++ S I L+ P + +VT+++ E++ H F +
Sbjct: 100 SGKIGGRKGEPDSGGLAVGNDIGSVEMIRWALRTPFDRDVVTHYECQEQVLDHAFSHLGI 159
Query: 412 VAP--EEHPVLLTEAPLNPKANRE 477
P HPV++TE NP R+
Sbjct: 160 NTPGGVNHPVIMTEPVCNPNYCRQ 183
>SB_55640| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1071
Score = 32.7 bits (71), Expect = 0.32
Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 9/51 (17%)
Frame = +1
Query: 517 PCTSPSKPC----SRCTRPVVPPVSCWTPATVSPTPC-----PSTKDTHSP 642
P T PC + CT+ +P +TP T TPC PST+ +H+P
Sbjct: 844 PSTKRYTPCYERYTPCTKRYIPSAKRYTPCTERYTPCTKRYTPSTEPSHAP 894
Score = 29.5 bits (63), Expect = 3.0
Identities = 14/37 (37%), Positives = 17/37 (45%), Gaps = 4/37 (10%)
Frame = +1
Query: 517 PCTSPSKPCSR----CTRPVVPPVSCWTPATVSPTPC 615
PCT PC+ CT P +TP+T TPC
Sbjct: 632 PCTERYIPCTERYTPCTERYTPSTERYTPSTERYTPC 668
Score = 29.1 bits (62), Expect = 3.9
Identities = 14/37 (37%), Positives = 17/37 (45%), Gaps = 4/37 (10%)
Frame = +1
Query: 517 PCTSPSKPC----SRCTRPVVPPVSCWTPATVSPTPC 615
PCT PC + CT+ P +TP T TPC
Sbjct: 746 PCTERYTPCYERYTPCTKRYTPCTERYTPCTERYTPC 782
>SB_34189| Best HMM Match : MAM (HMM E-Value=5.60519e-45)
Length = 649
Score = 32.7 bits (71), Expect = 0.32
Identities = 18/46 (39%), Positives = 24/46 (52%)
Frame = +1
Query: 502 TFTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHS 639
T +PP T+PSK T P+ P++ TP T T +TK T S
Sbjct: 380 TKAKPPTTTPSK----ATAPISDPMTTTTPTTTKATTPTTTKATAS 421
>SB_33205| Best HMM Match : Mucin (HMM E-Value=0.0024)
Length = 286
Score = 32.3 bits (70), Expect = 0.42
Identities = 13/43 (30%), Positives = 20/43 (46%)
Frame = +1
Query: 523 TSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 651
T+P+ P + T P P + TP T + TP +P P+
Sbjct: 130 TTPTTPTTAPTTPTTPTTAATTPTTAATTPAAGAAAAAAPPPA 172
>SB_34754| Best HMM Match : TSP_1 (HMM E-Value=7.4e-12)
Length = 439
Score = 31.9 bits (69), Expect = 0.55
Identities = 25/80 (31%), Positives = 31/80 (38%), Gaps = 2/80 (2%)
Frame = +1
Query: 415 APEEHPVLLTEAPLN--PKANREKMTQIMFETFTRPPCTSPSKPCSRCTRPVVPPVSCWT 588
AP PV+ TEAP P + T + T P T P + V PPV
Sbjct: 64 APPPPPVV-TEAPTTVPPPVVTDAPTTVPPPVVTDAPTTVPPPVVTDAPTTVPPPVVTDA 122
Query: 589 PATVSPTPCPSTKDTHSPTP 648
P TV P P+ + P P
Sbjct: 123 PTTVPPPVQPTEPPSTRPPP 142
Score = 31.5 bits (68), Expect = 0.73
Identities = 24/77 (31%), Positives = 28/77 (36%)
Frame = +1
Query: 418 PEEHPVLLTEAPLNPKANREKMTQIMFETFTRPPCTSPSKPCSRCTRPVVPPVSCWTPAT 597
P V T+AP P E T + T P T P + V PPV P T
Sbjct: 54 PSVVEVTTTQAPPPPPVVTEAPTTVPPPVVTDAPTTVPPPVVTDAPTTVPPPVVTDAPTT 113
Query: 598 VSPTPCPSTKDTHSPTP 648
V P P + T P P
Sbjct: 114 V-PPPVVTDAPTTVPPP 129
Score = 29.1 bits (62), Expect = 3.9
Identities = 26/74 (35%), Positives = 29/74 (39%), Gaps = 1/74 (1%)
Frame = +1
Query: 430 PVLLTEAPLNPKANREKMTQIMFETFTRPPCTSPSKPCSRCTR-PVVPPVSCWTPATVSP 606
PVL A P A + TQ T PP PS T+ P PPV P TV P
Sbjct: 22 PVLTEAATTQPPAPPPEPTQAPVAD-TDPPTNPPSVVEVTTTQAPPPPPVVTEAPTTV-P 79
Query: 607 TPCPSTKDTHSPTP 648
P + T P P
Sbjct: 80 PPVVTDAPTTVPPP 93
>SB_7913| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 336
Score = 31.9 bits (69), Expect = 0.55
Identities = 27/68 (39%), Positives = 30/68 (44%)
Frame = +2
Query: 524 RRHPSRALAVRVRSYHRYRAGLRRRCLPHRAHLRRIRTPPRHPASGLSRSRPHRLPHEDP 703
RR S A R RS R R+ RRR RR R+P H S SRSR R P
Sbjct: 211 RRSHSPAHHRRSRSRSRSRSPRRRRRSRSPRRRRRSRSPSPHHRSHRSRSR-SRSPRRRH 269
Query: 704 HRARLLVH 727
R+R H
Sbjct: 270 SRSRSPTH 277
Score = 27.9 bits (59), Expect = 9.0
Identities = 25/73 (34%), Positives = 30/73 (41%), Gaps = 5/73 (6%)
Frame = +2
Query: 503 HSHARHVRRHPSRALAVRVRSYHRYRAGLRRR-----CLPHRAHLRRIRTPPRHPASGLS 667
HS A H RR SR+ + R R R+ RRR HR+H R R+ S
Sbjct: 214 HSPAHH-RRSRSRSRSRSPRRRRRSRSPRRRRRSRSPSPHHRSHRSRSRSRSPRRRHSRS 272
Query: 668 RSRPHRLPHEDPH 706
RS HR H
Sbjct: 273 RSPTHRRHRSRSH 285
>SB_257| Best HMM Match : Tetraspannin (HMM E-Value=1.5)
Length = 237
Score = 31.9 bits (69), Expect = 0.55
Identities = 18/53 (33%), Positives = 22/53 (41%)
Frame = +2
Query: 500 KHSHARHVRRHPSRALAVRVRSYHRYRAGLRRRCLPHRAHLRRIRTPPRHPAS 658
+H H H HPS + + +R HR RR H H R P HP S
Sbjct: 168 RHRHHHHHHHHPSTIIII-LRHRHRQHYNRHRRHHHHHRH-RHHHHHPNHPYS 218
>SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 120
Score = 31.5 bits (68), Expect = 0.73
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -1
Query: 222 GNTARGASSPAKPALHIPEPLSTT 151
GNT R PAKPAL++P P S T
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103
>SB_37084| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1361
Score = 31.5 bits (68), Expect = 0.73
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = -3
Query: 130 AHLELVKLVRCRCDKMKIKRPAVTANREKQIPIAGRCPCST 8
A L L+KL CRC K +R + + + IP C C++
Sbjct: 1296 APLSLLKLTTCRCVKTACRRDDLCSCKANDIPCTEACLCTS 1336
>SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8)
Length = 170
Score = 31.5 bits (68), Expect = 0.73
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -1
Query: 222 GNTARGASSPAKPALHIPEPLSTT 151
GNT R PAKPAL++P P S T
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103
>SB_11571| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 469
Score = 30.7 bits (66), Expect = 1.3
Identities = 22/65 (33%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
Frame = +1
Query: 451 PLNPKANR-EKMTQIMFETFTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTK 627
PL P +N +++T ++ T P T PS+ S RP PP SC + TP P
Sbjct: 56 PLKPPSNTPQQLTTPPHQSNTPRPLTPPSRQ-SNNPRPHTPP-SCQSNTPRPLTPPPRQS 113
Query: 628 DTHSP 642
+T P
Sbjct: 114 NTTQP 118
>SB_13398| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2149
Score = 30.7 bits (66), Expect = 1.3
Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +1
Query: 523 TSPSKPCSRCTRPVVPPVSCWTPATVSP-TPCPSTK 627
+SP KP T+PVVP P+ + P P PS+K
Sbjct: 1511 SSPPKPVKPSTKPVVPVKPVKPPSPIKPKPPIPSSK 1546
>SB_8780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 172
Score = 30.7 bits (66), Expect = 1.3
Identities = 12/46 (26%), Positives = 20/46 (43%)
Frame = -3
Query: 670 PAKSRRRMAWGSAYPS*MGTVWETPSPESSTIPVVRPDAYSESTAW 533
P+ + +W P T W +PSP+ T P ++T+W
Sbjct: 93 PSPQYKTTSWSLPLPQHKTTSWSSPSPKYKTTSWTSPSPQYKTTSW 138
Score = 28.7 bits (61), Expect = 5.2
Identities = 12/46 (26%), Positives = 19/46 (41%)
Frame = -3
Query: 670 PAKSRRRMAWGSAYPS*MGTVWETPSPESSTIPVVRPDAYSESTAW 533
P + S +P T W +PSP+ T P ++T+W
Sbjct: 57 PLSQYKTTFMSSTFPQHKTTSWTSPSPQYKTTSWTSPSPQYKTTSW 102
Score = 28.3 bits (60), Expect = 6.8
Identities = 12/46 (26%), Positives = 19/46 (41%)
Frame = -3
Query: 670 PAKSRRRMAWGSAYPS*MGTVWETPSPESSTIPVVRPDAYSESTAW 533
P+ + +W S P T W P P+ T P ++T+W
Sbjct: 81 PSPQYKTTSWTSPSPQYKTTSWSLPLPQHKTTSWSSPSPKYKTTSW 126
>SB_45934| Best HMM Match : Gp-FAR-1 (HMM E-Value=2)
Length = 694
Score = 30.3 bits (65), Expect = 1.7
Identities = 19/45 (42%), Positives = 23/45 (51%)
Frame = -3
Query: 604 ETPSPESSTIPVVRPDAYSESTAWMATYMAGV*MFRT*SGSSSLC 470
ETP+P + P PDA TAW+ T A + FRT S S C
Sbjct: 169 ETPTPALESAPAAMPDA--TDTAWV-TAKARLYFFRTCRPSPSRC 210
>SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 749
Score = 30.3 bits (65), Expect = 1.7
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = -1
Query: 222 GNTARGASSPAKPALHIPEPLSTT 151
GNT R PAKP+L++P P S T
Sbjct: 540 GNTNRRTRIPAKPSLNLPSPPSKT 563
>SB_29252| Best HMM Match : Cytadhesin_P30 (HMM E-Value=1.4)
Length = 1439
Score = 30.3 bits (65), Expect = 1.7
Identities = 26/92 (28%), Positives = 33/92 (35%), Gaps = 4/92 (4%)
Frame = +1
Query: 388 HTFYNELRVAP--EEHPVLLTEAPLNPKAN--REKMTQIMFETFTRPPCTSPSKPCSRCT 555
HT N AP HP L P+A M + ET +P +PS +
Sbjct: 276 HTISNPAMAAPWVTPHPATLPVTLFTPQAAPVTPPMGAQLPET-EQPQMVAPSSTVTPPV 334
Query: 556 RPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 651
PP S P PTP + +P PS
Sbjct: 335 TEPAPPSSVVAPPPAVPTPATAPPPVVAPPPS 366
Score = 30.3 bits (65), Expect = 1.7
Identities = 19/68 (27%), Positives = 29/68 (42%), Gaps = 2/68 (2%)
Frame = +1
Query: 451 PLNPKANREKMTQIMFETFT-RPPCTSPSKPCSRCTRP-VVPPVSCWTPATVSPTPCPST 624
P+ + + Q++ + T PP T P+ P S P VP + P V+P P
Sbjct: 310 PMGAQLPETEQPQMVAPSSTVTPPVTEPAPPSSVVAPPPAVPTPATAPPPVVAPPPSVFA 369
Query: 625 KDTHSPTP 648
+ PTP
Sbjct: 370 SSSGVPTP 377
>SB_8336| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.84)
Length = 509
Score = 30.3 bits (65), Expect = 1.7
Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 3/53 (5%)
Frame = +1
Query: 502 TFTRPPCTSPSKPCSR---CTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 651
T T P T+P+KP + T P + PAT +PT +T + TP+
Sbjct: 136 TTTPPATTTPTKPTTTTPPATTTPTKPTTTTPPATTTPTKSTTTTPPATTTPT 188
Score = 29.9 bits (64), Expect = 2.2
Identities = 22/61 (36%), Positives = 29/61 (47%), Gaps = 5/61 (8%)
Frame = +1
Query: 502 TFTRPPCTSPSKPCSR---CTRPVVPPVSCWTPATVSPT-PCPSTKD-THSPTPSCVWT* 666
T T P T+P+KP + T P + PAT +PT P +T T +PT S T
Sbjct: 122 TTTPPGTTTPTKPTTTTPPATTTPTKPTTTTPPATTTPTKPTTTTPPATTTPTKSTTTTP 181
Query: 667 P 669
P
Sbjct: 182 P 182
Score = 29.1 bits (62), Expect = 3.9
Identities = 22/75 (29%), Positives = 31/75 (41%), Gaps = 5/75 (6%)
Frame = +1
Query: 442 TEAPLNPKANREKMTQIMFE-TFTRPPCTS-PSKPCSR---CTRPVVPPVSCWTPATVSP 606
T P P T + T T PP T+ P+KP + T P + PAT +P
Sbjct: 44 TTTPTTPTTTTPPATTTPTKPTNTTPPATTTPTKPTTTTPPATTTPTTPTTTTPPATTTP 103
Query: 607 TPCPSTKDTHSPTPS 651
T +T + TP+
Sbjct: 104 TKPTTTTPPATTTPT 118
Score = 29.1 bits (62), Expect = 3.9
Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 3/53 (5%)
Frame = +1
Query: 502 TFTRPPCTSPSKPCSRC---TRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 651
T T P T+P+KP + T P + PAT +PT +T + TP+
Sbjct: 108 TTTPPATTTPTKPTTTTPPGTTTPTKPTTTTPPATTTPTKPTTTTPPATTTPT 160
Score = 27.9 bits (59), Expect = 9.0
Identities = 17/48 (35%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Frame = +1
Query: 511 RPPCT-SPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 651
RPP S P +R T P P + PAT +PT +T + TP+
Sbjct: 30 RPPLLPSQQLPHNRTTTPTTPTTTT-PPATTTPTKPTNTTPPATTTPT 76
Score = 27.9 bits (59), Expect = 9.0
Identities = 16/53 (30%), Positives = 24/53 (45%), Gaps = 3/53 (5%)
Frame = +1
Query: 502 TFTRPPCTSPSKPCSR---CTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 651
T T P T+P+KP + T P + P T +PT +T + TP+
Sbjct: 94 TTTPPATTTPTKPTTTTPPATTTPTKPTTTTPPGTTTPTKPTTTTPPATTTPT 146
>SB_27518| Best HMM Match : RWD (HMM E-Value=0.015)
Length = 277
Score = 30.3 bits (65), Expect = 1.7
Identities = 9/15 (60%), Positives = 13/15 (86%)
Frame = +1
Query: 529 PSKPCSRCTRPVVPP 573
P++PCS CT+P +PP
Sbjct: 220 PTEPCSLCTKPALPP 234
>SB_18296| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 865
Score = 30.3 bits (65), Expect = 1.7
Identities = 22/81 (27%), Positives = 36/81 (44%), Gaps = 1/81 (1%)
Frame = +1
Query: 412 VAPEEHPVLLTEAPLNPKANREKMTQI-MFETFTRPPCTSPSKPCSRCTRPVVPPVSCWT 588
V P++ P + PL K ++E T + + P + S+P S TR +T
Sbjct: 559 VVPKKIPYIPALRPLTTKPHKEFTTHLHCILSALSTPVLNTSRPKSARTRAWSVSPRLYT 618
Query: 589 PATVSPTPCPSTKDTHSPTPS 651
P +++P S + T S PS
Sbjct: 619 PKSITPKFILSPRQTLSAPPS 639
>SB_11585| Best HMM Match : TPR_MLP1_2 (HMM E-Value=2.2)
Length = 610
Score = 30.3 bits (65), Expect = 1.7
Identities = 24/76 (31%), Positives = 36/76 (47%), Gaps = 4/76 (5%)
Frame = +1
Query: 433 VLLTEAPLNPKANREKMTQIMFETFTRP--PCT--SPSKPCSRCTRPVVPPVSCWTPATV 600
V L +A + NR +++ TF+ P T +PS+ S PV S + T+
Sbjct: 271 VSLNKAAVLAGINRRMISRENLFTFSSKLSPLTEETPSRLVSLQNSPVKMMRSTLSAQTL 330
Query: 601 SPTPCPSTKDTHSPTP 648
+ P P + DT SPTP
Sbjct: 331 AENPIPESTDTTSPTP 346
>SB_18737| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 696
Score = 29.9 bits (64), Expect = 2.2
Identities = 11/35 (31%), Positives = 18/35 (51%)
Frame = -3
Query: 118 LVKLVRCRCDKMKIKRPAVTANREKQIPIAGRCPC 14
L++L C C+K + KR + + Q+P C C
Sbjct: 620 LLELTTCSCEKSRCKRDDLCPCKSNQMPCTEACQC 654
>SB_58934| Best HMM Match : TPR_1 (HMM E-Value=3.8e-37)
Length = 1632
Score = 29.9 bits (64), Expect = 2.2
Identities = 15/38 (39%), Positives = 16/38 (42%), Gaps = 5/38 (13%)
Frame = +1
Query: 517 PCTSPSKPCSRCTRPVVPPVS-----CWTPATVSPTPC 615
PC P PC P V PV C P V+ TPC
Sbjct: 551 PCVDPVTPCVDPVTPYVDPVKVSVTPCVDPVKVAVTPC 588
Score = 28.7 bits (61), Expect = 5.2
Identities = 13/35 (37%), Positives = 13/35 (37%)
Frame = +1
Query: 517 PCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPS 621
PC P PC P V PV V P PS
Sbjct: 376 PCVDPVTPCVDPVTPYVDPVKVAVTPCVDPVKVPS 410
>SB_51831| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1065
Score = 29.5 bits (63), Expect = 3.0
Identities = 24/84 (28%), Positives = 38/84 (45%), Gaps = 1/84 (1%)
Frame = +1
Query: 409 RVAPEEHPVLLTEAPLNPKANREKMTQIMFETFTRPPCTSPSKPCSRCTRPVVPPVSCWT 588
++A + +P + E N K + +K+ Q M +T T + P + R + W
Sbjct: 866 KIASKHNPEMTEEMRANLKEHLDKINQRMNDTMT----LLYNMP--KIMRKFAFELPNWA 919
Query: 589 PATVSPTPCPSTKDTHSP-TPSCV 657
P PT P+ K T +P TPS V
Sbjct: 920 PKIPLPTEPPTEKMTEAPTTPSAV 943
>SB_45111| Best HMM Match : rve (HMM E-Value=1.2e-24)
Length = 1575
Score = 29.5 bits (63), Expect = 3.0
Identities = 22/72 (30%), Positives = 34/72 (47%)
Frame = -2
Query: 638 ECVSFVDGHGVGDTVAGVQHDTGGTTGRVQREHGLDGDVHGGRVNVSNMIWVIFSLLALG 459
+CVSF D +T GVQ GG G V+R+ + +VS+ V++ L
Sbjct: 69 DCVSFEDPFTGVETPLGVQQGGGGGGGGVKRKRDPE--------DVSDKDDVVYELRQTS 120
Query: 458 LRGASVSRTGCS 423
+ ++ RT CS
Sbjct: 121 TKRSTKMRTNCS 132
>SB_30534| Best HMM Match : EGF (HMM E-Value=0.12)
Length = 521
Score = 29.5 bits (63), Expect = 3.0
Identities = 13/52 (25%), Positives = 26/52 (50%)
Frame = +1
Query: 472 REKMTQIMFETFTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTK 627
++ +++I+ + T+ P T KP + RP+ P + P + P P T+
Sbjct: 244 QKSVSEILSQVSTKQPATERPKPRTEKPRPITQPPTTQRPRPKTRRPEPRTE 295
>SB_16360| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 379
Score = 29.5 bits (63), Expect = 3.0
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = -2
Query: 269 PIPTIRPDGGAFPRSRGTRREEHHLLRNRPCTYRSHCLLPTRQLL 135
P P + P+ G FP + G +E H L C Y + LLP Q++
Sbjct: 92 PSPDVVPNAGQFPNAEG--QEVHFLCTGPMCRY-AEDLLPLLQIM 133
>SB_53581| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1584
Score = 29.5 bits (63), Expect = 3.0
Identities = 26/80 (32%), Positives = 32/80 (40%), Gaps = 14/80 (17%)
Frame = +1
Query: 442 TEAPLNPKANR------EKMTQIMFETFTRPPCTSPSKPCSRCTRPVVPPVSCWTPATV- 600
TEA +PKAN+ K T+ + PP P C+ P PPV PA +
Sbjct: 1336 TEAGKHPKANKVGKDKHNKGTKKCYGACAPPPMADP---CATMAAPCAPPVMMAAPAPML 1392
Query: 601 ------SPTPC-PSTKDTHS 639
P PC P THS
Sbjct: 1393 APMLAPMPAPCAPPECHTHS 1412
>SB_35402| Best HMM Match : Collagen (HMM E-Value=0.39)
Length = 657
Score = 29.5 bits (63), Expect = 3.0
Identities = 18/60 (30%), Positives = 24/60 (40%), Gaps = 2/60 (3%)
Frame = +1
Query: 481 MTQIMFETFTRPPCTSPSKPCSRCTRPVVPPVSCWT--PATVSPTPCPSTKDTHSPTPSC 654
MT E + PC P K + ++P P V+ T PA +P P TP C
Sbjct: 425 MTPTDMENMMKTPCPGPGKSGVKVSKP-APGVTVVTINPADAQISPSPKNTAAAQSTPLC 483
>SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1011
Score = 29.1 bits (62), Expect = 3.9
Identities = 23/48 (47%), Positives = 28/48 (58%), Gaps = 5/48 (10%)
Frame = +1
Query: 523 TSPSKPCSRCTRPVVP--PVSCWTPATVSPTPC-PSTKDTHSP--TPS 651
++PS PC+ T P P P + TP+T S TPC PST T S TPS
Sbjct: 10 STPSTPCTPST-PSTPSTPSTPRTPSTPS-TPCTPSTPSTPSTPITPS 55
Score = 28.7 bits (61), Expect = 5.2
Identities = 22/45 (48%), Positives = 27/45 (60%), Gaps = 3/45 (6%)
Frame = +1
Query: 523 TSPSKPCSRCTRPVVP--PVSCWTPATVSPTPC-PSTKDTHSPTP 648
++PS PC+ T P P P + TP+T S TPC PST T S TP
Sbjct: 375 STPSTPCTPST-PSTPSTPSTPRTPSTPS-TPCTPSTPSTPS-TP 416
>SB_11738| Best HMM Match : SH3_2 (HMM E-Value=3.7e-32)
Length = 2436
Score = 29.1 bits (62), Expect = 3.9
Identities = 25/68 (36%), Positives = 31/68 (45%), Gaps = 3/68 (4%)
Frame = +2
Query: 500 KHSHARHVRRHPSRALAVRVR-SYHRYRAGLRRRCLPHRAHLRRIRTP-PRH-PASGLSR 670
+H ARH RH +R + HR R GL R + H RIR RH GL+R
Sbjct: 1187 RHGLARHTIRHGLARHRIRHGLARHRIRLGLARHRIRHGLARHRIRHGLARHRTRHGLAR 1246
Query: 671 SRPHRLPH 694
HR+ H
Sbjct: 1247 ---HRIRH 1251
Score = 27.9 bits (59), Expect = 9.0
Identities = 24/61 (39%), Positives = 28/61 (45%), Gaps = 3/61 (4%)
Frame = +2
Query: 503 HSHARHVRRHPSRALAVRVR-SYHRYRAGLRRRCLPHRAHLRRIRTP-PRHP-ASGLSRS 673
H ARH RH +R + HR R GL R + H L RIR RH GL+R
Sbjct: 1276 HVLARHRIRHGLARHRIRHGLARHRIRHGLARHRIRHGLALHRIRCGLARHTIRRGLARH 1335
Query: 674 R 676
R
Sbjct: 1336 R 1336
>SB_58974| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1831
Score = 29.1 bits (62), Expect = 3.9
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +1
Query: 550 CTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 651
C+RP PPV+ T +T S T +T T + TP+
Sbjct: 620 CSRPTTPPVTT-TKSTTSSTTKGTTASTTTSTPT 652
>SB_23620| Best HMM Match : Pentapeptide_2 (HMM E-Value=0.74)
Length = 483
Score = 28.7 bits (61), Expect = 5.2
Identities = 14/46 (30%), Positives = 20/46 (43%)
Frame = +1
Query: 511 RPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTP 648
RPP + C+ C P + P T PTP P + + +P P
Sbjct: 135 RPPVCPCKQECNFCCIEEEKPTTTKKPTT-KPTPAPHSSPSPTPPP 179
>SB_20112| Best HMM Match : EGF (HMM E-Value=0)
Length = 2112
Score = 28.7 bits (61), Expect = 5.2
Identities = 22/79 (27%), Positives = 33/79 (41%), Gaps = 1/79 (1%)
Frame = +1
Query: 421 EEHPVLLTEAPLNPKANREKMTQIMF-ETFTRPPCTSPSKPCSRCTRPVVPPVSCWTPAT 597
EEH ++ T N ++ + MF E PP S + P P+S TP+
Sbjct: 2034 EEHVMMETTLHHNNQSMCVPVESGMFREKHHTPPSAHSYGTSSYDSSPQKLPISYLTPSP 2093
Query: 598 VSPTPCPSTKDTHSPTPSC 654
SP S+ +HS +C
Sbjct: 2094 ESPKDWSSSPSSHSDWSNC 2112
>SB_19751| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2644
Score = 28.7 bits (61), Expect = 5.2
Identities = 17/47 (36%), Positives = 19/47 (40%), Gaps = 1/47 (2%)
Frame = +1
Query: 523 TSPSKPCS-RCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPSCVW 660
T P P + + T P P T TV PT PS D T C W
Sbjct: 1691 TCPITPVNAKPTNPWTTPAPSPTATTVGPTLAPSQWDCSFETNLCSW 1737
>SB_6983| Best HMM Match : rve (HMM E-Value=0.011)
Length = 251
Score = 28.7 bits (61), Expect = 5.2
Identities = 15/35 (42%), Positives = 20/35 (57%)
Frame = +1
Query: 553 TRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPSCV 657
T VVPP+ P V P+P + + SPTPSC+
Sbjct: 207 TPAVVPPI----PTLVVPSPL-TQPEVESPTPSCI 236
>SB_46336| Best HMM Match : DUF1518 (HMM E-Value=5.6)
Length = 187
Score = 28.7 bits (61), Expect = 5.2
Identities = 17/50 (34%), Positives = 21/50 (42%), Gaps = 2/50 (4%)
Frame = +1
Query: 529 PSKPCSRCTRPV--VPPVSCWTPATVSPTPCPSTKDTHSPTPSCVWT*PV 672
PS P S PV V T T +PT C T + P+C+ PV
Sbjct: 85 PSSPVSPLPSPVPAVAATPSQTYCTSTPTSCTPTTTCYLQVPTCILIPPV 134
>SB_9336| Best HMM Match : Taeniidae_ag (HMM E-Value=0.9)
Length = 219
Score = 28.7 bits (61), Expect = 5.2
Identities = 16/55 (29%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = -2
Query: 614 HGVGDTVAGVQHDT-GGTTGRVQREHGLDGDVHGGRVNVSNMIWVIFSLLALGLR 453
HG D + +D GG G + G+DGD G V V ++ ++ ++ L +R
Sbjct: 5 HGESDGIGYGDNDVDGGVDGYNDGDGGVDGDNDGATVMVMVVVVIVVMVVVLMVR 59
>SB_8083| Best HMM Match : Lectin_C (HMM E-Value=3.8e-22)
Length = 3445
Score = 28.7 bits (61), Expect = 5.2
Identities = 23/75 (30%), Positives = 27/75 (36%), Gaps = 1/75 (1%)
Frame = +1
Query: 403 ELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFTRPPCTSPSKPCSRCTRPVVPPVSC 582
E VAPE T + E T + T P SP+ P T P V P
Sbjct: 239 ETTVAPEATMAPETTVVPDTTVEPETSTTLKPTDVTEKPEASPATPAEYSTTPSVQPELT 298
Query: 583 WTPATVSPTPC-PST 624
P T PT P+T
Sbjct: 299 EAPQTDYPTTASPAT 313
>SB_45078| Best HMM Match : ABC_tran (HMM E-Value=2.6e-36)
Length = 972
Score = 28.3 bits (60), Expect = 6.8
Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Frame = +1
Query: 502 TFTRPPCTSP--SKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTP 648
T T PP T+ + C R +R + P P+ V P P T TH+P P
Sbjct: 606 TLTLPPQTAVQCTLACPRVSRVLSPS----GPSVVVTLPLPPTDHTHTPPP 652
>SB_37008| Best HMM Match : MAM (HMM E-Value=1.3999e-42)
Length = 382
Score = 28.3 bits (60), Expect = 6.8
Identities = 14/40 (35%), Positives = 18/40 (45%)
Frame = +1
Query: 550 CTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPSCVWT*P 669
CT P ++ P T + T P TK P PS + T P
Sbjct: 150 CTGTPEPTITSKPPVTETTTTKPETKPPKPPAPSTIPTPP 189
>SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 130
Score = 28.3 bits (60), Expect = 6.8
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -1
Query: 222 GNTARGASSPAKPALHIPEPLSTT 151
GNT R AKPAL++P P S T
Sbjct: 40 GNTNRRTRIQAKPALNLPSPPSKT 63
>SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 635
Score = 28.3 bits (60), Expect = 6.8
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = -1
Query: 222 GNTARGASSPAKPALHIPEPLSTT 151
GNT R PAKP L IP P + T
Sbjct: 68 GNTNRRTRIPAKPTLTIPSPPTKT 91
>SB_10665| Best HMM Match : PT (HMM E-Value=6.2)
Length = 215
Score = 28.3 bits (60), Expect = 6.8
Identities = 14/35 (40%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Frame = +2
Query: 605 PHRAHLRRIRTPPR-HPASGLSRSRPHRLPHEDPH 706
PHR H+ RTP R H + PH P +PH
Sbjct: 161 PHRPHMDPTRTPHRPHMDPTRTSHGPHTDPTRNPH 195
>SB_7693| Best HMM Match : 7tm_1 (HMM E-Value=5.3e-09)
Length = 688
Score = 28.3 bits (60), Expect = 6.8
Identities = 15/50 (30%), Positives = 23/50 (46%)
Frame = +3
Query: 492 HVRNIHTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALP 641
H+ +++T + IQA SLYAS + H VP+Y + P
Sbjct: 584 HLVHLYTSISFPCIQAPRSLYASTSFPCMQASRSRVCKHLVPLYTSTSFP 633
>SB_6096| Best HMM Match : Chitin_bind_3 (HMM E-Value=1.9e-06)
Length = 295
Score = 28.3 bits (60), Expect = 6.8
Identities = 14/37 (37%), Positives = 17/37 (45%)
Frame = +1
Query: 502 TFTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTP 612
T PP +P+ P T P VPP + P T P P
Sbjct: 223 TTQTPPTKAPTDPPVPPTNPPVPPTNPPAPPTNPPKP 259
>SB_42612| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 732
Score = 28.3 bits (60), Expect = 6.8
Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Frame = +1
Query: 508 TRPPCTSPSKPCSRCT--RPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 651
TRP TS + S+ RP P++ +P S + P+ D HSPT S
Sbjct: 431 TRPKTTSGTLSVSKSIPPRPSTEPITTSSPYRHSWSYVPNFVDYHSPTSS 480
>SB_40272| Best HMM Match : Tymo_45kd_70kd (HMM E-Value=2.4)
Length = 843
Score = 28.3 bits (60), Expect = 6.8
Identities = 14/45 (31%), Positives = 22/45 (48%)
Frame = -1
Query: 327 EGQDTSFALCLISYIRVLLSHTDHPP*WRGLPTIEGNTARGASSP 193
E + T+ L +R+ +S+ D P WR +PTI G +P
Sbjct: 283 ESRTTARQLLCEDAVRIKVSYEDAPSAWRSIPTIVEALFPGTVAP 327
>SB_36275| Best HMM Match : Extensin_2 (HMM E-Value=0.062)
Length = 406
Score = 28.3 bits (60), Expect = 6.8
Identities = 23/94 (24%), Positives = 35/94 (37%), Gaps = 5/94 (5%)
Frame = +1
Query: 382 WHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFTRPPCTSPSKPCSRCTRP 561
+ H Y + P H T P P + + ++ + P PS P S
Sbjct: 170 YKHPSYPTYNIPPTPH----TSIPPTPHTSIPPTPRPTYKHPSYPSYKHPSYPSSHIQAS 225
Query: 562 VVPPVSC----WTPAT-VSPTPCPSTKDTHSPTP 648
++P + P T + PTP P T +PTP
Sbjct: 226 LLPHIQASLLPLIPNTSIPPTPTPHTSIPPTPTP 259
>SB_28937| Best HMM Match : 7tm_1 (HMM E-Value=2.1e-08)
Length = 1258
Score = 28.3 bits (60), Expect = 6.8
Identities = 21/71 (29%), Positives = 31/71 (43%), Gaps = 1/71 (1%)
Frame = +1
Query: 442 TEAPLNPKANREKMTQIMFETFTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPC-P 618
T+AP+NP Q+ + P T+P P + P+ P TP ++PTP P
Sbjct: 169 TQAPINPTPINSNSHQLQLLSTLIPSTTAPINPAAINPTPINP-----TP--INPTPINP 221
Query: 619 STKDTHSPTPS 651
S+ PS
Sbjct: 222 SSHQPSCYQPS 232
>SB_146| Best HMM Match : DUF836 (HMM E-Value=1.5)
Length = 554
Score = 28.3 bits (60), Expect = 6.8
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +3
Query: 216 CSPRSWEGPAIRADGRYGTEGLLCR 290
C+PR W P + +GR T L CR
Sbjct: 274 CAPRQWLEPTEKREGREVTNKLRCR 298
>SB_46680| Best HMM Match : Helicase_C (HMM E-Value=3.8e-22)
Length = 1058
Score = 27.9 bits (59), Expect = 9.0
Identities = 14/45 (31%), Positives = 25/45 (55%)
Frame = -1
Query: 315 TSFALCLISYIRVLLSHTDHPP*WRGLPTIEGNTARGASSPAKPA 181
+S +L +S R + + PP R P +EG +++G SP +P+
Sbjct: 963 SSTSLDALSKSRQKVMYAHEPP-KRVTPVVEGRSSKGDDSPGRPS 1006
>SB_8208| Best HMM Match : ShTK (HMM E-Value=1.2e-21)
Length = 226
Score = 27.9 bits (59), Expect = 9.0
Identities = 15/39 (38%), Positives = 19/39 (48%), Gaps = 2/39 (5%)
Frame = +1
Query: 535 KPCSRCTRPVVPPVS--CWTPATVSPTPCPSTKDTHSPT 645
K C C + PP+ T T +PT P TK T +PT
Sbjct: 180 KSCGFCGKAPHPPIQEPPVTKTTTAPTEPPVTKTTTAPT 218
>SB_3565| Best HMM Match : ASC (HMM E-Value=1.1e-12)
Length = 575
Score = 27.9 bits (59), Expect = 9.0
Identities = 16/45 (35%), Positives = 19/45 (42%), Gaps = 1/45 (2%)
Frame = +1
Query: 514 PPCTSPSKPCSRCTRPVVPPVSCWTP-ATVSPTPCPSTKDTHSPT 645
PP T+P P P + T AT PT P+T T PT
Sbjct: 1 PPVTTPVPTTESTAVPTTAPTTEQTTVATTIPTTIPTTVPTTEPT 45
>SB_40582| Best HMM Match : Kazal_1 (HMM E-Value=0)
Length = 1568
Score = 27.9 bits (59), Expect = 9.0
Identities = 13/40 (32%), Positives = 15/40 (37%)
Frame = +1
Query: 535 KPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPSC 654
K C R VPPVS +P PC P +C
Sbjct: 637 KAFGECGRTTVPPVSTSSPTPTPQDPCTGFNCDTPPYSTC 676
>SB_11044| Best HMM Match : FMO-like (HMM E-Value=3.4)
Length = 781
Score = 27.9 bits (59), Expect = 9.0
Identities = 14/49 (28%), Positives = 22/49 (44%)
Frame = +1
Query: 517 PCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPSCVWT 663
P +P+ P S+ T PP+ TP + TP P+ + + P T
Sbjct: 19 PAPTPTTPTSQATTASGPPII--TPIPLKETPTPALESAPAAMPDATDT 65
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,149,843
Number of Sequences: 59808
Number of extensions: 703915
Number of successful extensions: 2888
Number of sequences better than 10.0: 76
Number of HSP's better than 10.0 without gapping: 2275
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2819
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1974037988
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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