Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20380
(671 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC001513-1|AAH01513.1| 580|Homo sapiens VPS18 protein protein. 62 2e-09
AF308802-1|AAG34679.1| 973|Homo sapiens vacuolar protein sortin... 62 2e-09
AB040908-1|BAA95999.1| 986|Homo sapiens KIAA1475 protein protein. 62 2e-09
X17094-1|CAA34948.1| 794|Homo sapiens protein ( Human fur mRNA ... 31 2.8
X04329-1|CAA27860.1| 499|Homo sapiens furin protein. 31 2.8
BC012181-1|AAH12181.1| 794|Homo sapiens furin (paired basic ami... 31 2.8
AY682080-1|AAT74625.1| 4646|Homo sapiens dynein, cytoplasmic, he... 31 2.8
AB002323-1|BAA20783.3| 4658|Homo sapiens KIAA0325 protein protein. 31 2.8
BC103491-1|AAI03492.1| 718|Homo sapiens LON peptidase N-termina... 31 3.8
BC100671-1|AAI00672.1| 759|Homo sapiens LON peptidase N-termina... 31 3.8
BC099847-1|AAH99847.1| 759|Homo sapiens LON peptidase N-termina... 31 3.8
AL772284-3|CAI41520.1| 524|Homo sapiens LON peptidase N-termina... 31 3.8
AL772284-2|CAI41519.1| 718|Homo sapiens LON peptidase N-termina... 31 3.8
AK026265-1|BAB15419.1| 516|Homo sapiens protein ( Homo sapiens ... 31 3.8
BC121817-1|AAI21818.1| 209|Homo sapiens amelotin protein. 30 6.6
BC121812-1|AAI21813.1| 208|Homo sapiens amelotin protein. 30 6.6
BC063479-1|AAH63479.1| 374|Homo sapiens LARP4 protein protein. 30 6.6
BC022377-1|AAH22377.1| 188|Homo sapiens LARP4 protein protein. 30 6.6
AY358528-1|AAQ88892.1| 209|Homo sapiens RSTI689 protein. 30 6.6
AY004310-1|AAF86614.1| 375|Homo sapiens c-Mpl binding protein p... 30 6.6
AK125113-1|BAC86052.1| 654|Homo sapiens protein ( Homo sapiens ... 30 6.6
>BC001513-1|AAH01513.1| 580|Homo sapiens VPS18 protein protein.
Length = 580
Score = 62.1 bits (144), Expect = 2e-09
Identities = 34/92 (36%), Positives = 50/92 (54%), Gaps = 1/92 (1%)
Frame = +3
Query: 255 SELQYYFDK-NEMPKTFAWLTEQGIFYGQLDPTSQQNSNSVVTQGSLVTYPSGPDGKEIP 431
SEL +Y K P+ FAW+ G+ YG LD +S++++ + YP G P
Sbjct: 268 SELAFYTPKLRSAPRAFAWMMGDGVLYGALDCG---RPDSLLSEERVWEYPEGVGPGASP 324
Query: 432 PLSFVLTEFHTLLMYSDRVKVVSLLNKNLSTR 527
PL+ VLT+FH LL+ +DRV+ V L + R
Sbjct: 325 PLAIVLTQFHFLLLLADRVEAVCTLTGQVVLR 356
Score = 52.8 bits (121), Expect = 1e-06
Identities = 20/53 (37%), Positives = 34/53 (64%)
Frame = +2
Query: 512 ELVHEDIYSEAHGKLKTIIRDLKKRQIWVFTEKKIFRYKIVREERNLWQIYSD 670
++V D + E G LK +++D Q+W +TE+ +FRY + RE R++W+ Y D
Sbjct: 352 QVVLRDHFLEKFGPLKHMVKDSSTGQLWAYTERAVFRYHVQREARDVWRTYLD 404
>AF308802-1|AAG34679.1| 973|Homo sapiens vacuolar protein sorting
protein 18 protein.
Length = 973
Score = 62.1 bits (144), Expect = 2e-09
Identities = 34/92 (36%), Positives = 50/92 (54%), Gaps = 1/92 (1%)
Frame = +3
Query: 255 SELQYYFDK-NEMPKTFAWLTEQGIFYGQLDPTSQQNSNSVVTQGSLVTYPSGPDGKEIP 431
SEL +Y K P+ FAW+ G+ YG LD +S++++ + YP G P
Sbjct: 268 SELAFYTPKLRSAPRAFAWMMGDGVLYGALDCG---RPDSLLSEERVWEYPEGVGPGASP 324
Query: 432 PLSFVLTEFHTLLMYSDRVKVVSLLNKNLSTR 527
PL+ VLT+FH LL+ +DRV+ V L + R
Sbjct: 325 PLAIVLTQFHFLLLLADRVEAVCTLTGQVVLR 356
Score = 52.8 bits (121), Expect = 1e-06
Identities = 20/53 (37%), Positives = 34/53 (64%)
Frame = +2
Query: 512 ELVHEDIYSEAHGKLKTIIRDLKKRQIWVFTEKKIFRYKIVREERNLWQIYSD 670
++V D + E G LK +++D Q+W +TE+ +FRY + RE R++W+ Y D
Sbjct: 352 QVVLRDHFLEKFGPLKHMVKDSSTGQLWAYTERAVFRYHVQREARDVWRTYLD 404
>AB040908-1|BAA95999.1| 986|Homo sapiens KIAA1475 protein protein.
Length = 986
Score = 62.1 bits (144), Expect = 2e-09
Identities = 34/92 (36%), Positives = 50/92 (54%), Gaps = 1/92 (1%)
Frame = +3
Query: 255 SELQYYFDK-NEMPKTFAWLTEQGIFYGQLDPTSQQNSNSVVTQGSLVTYPSGPDGKEIP 431
SEL +Y K P+ FAW+ G+ YG LD +S++++ + YP G P
Sbjct: 281 SELAFYTPKLRSAPRAFAWMMGDGVLYGALDCG---RPDSLLSEERVWEYPEGVGPGASP 337
Query: 432 PLSFVLTEFHTLLMYSDRVKVVSLLNKNLSTR 527
PL+ VLT+FH LL+ +DRV+ V L + R
Sbjct: 338 PLAIVLTQFHFLLLLADRVEAVCTLTGQVVLR 369
Score = 52.8 bits (121), Expect = 1e-06
Identities = 20/53 (37%), Positives = 34/53 (64%)
Frame = +2
Query: 512 ELVHEDIYSEAHGKLKTIIRDLKKRQIWVFTEKKIFRYKIVREERNLWQIYSD 670
++V D + E G LK +++D Q+W +TE+ +FRY + RE R++W+ Y D
Sbjct: 365 QVVLRDHFLEKFGPLKHMVKDSSTGQLWAYTERAVFRYHVQREARDVWRTYLD 417
>X17094-1|CAA34948.1| 794|Homo sapiens protein ( Human fur mRNA for
furin. ).
Length = 794
Score = 31.5 bits (68), Expect = 2.8
Identities = 15/49 (30%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Frame = +3
Query: 297 TFAWLTE-QGIFYGQLDPTSQQNSNSVVTQGSLVTYPSGPDGKEIPPLS 440
T +W + G + +++ TS+ N+ +T+ +LV Y + P+G +PP S
Sbjct: 536 THSWDEDPSGEWVLEIENTSEANNYGTLTKFTLVLYGTAPEGLPVPPES 584
>X04329-1|CAA27860.1| 499|Homo sapiens furin protein.
Length = 499
Score = 31.5 bits (68), Expect = 2.8
Identities = 15/49 (30%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Frame = +3
Query: 297 TFAWLTE-QGIFYGQLDPTSQQNSNSVVTQGSLVTYPSGPDGKEIPPLS 440
T +W + G + +++ TS+ N+ +T+ +LV Y + P+G +PP S
Sbjct: 241 THSWDEDPSGEWVLEIENTSEANNYGTLTKFTLVLYGTAPEGLPVPPES 289
>BC012181-1|AAH12181.1| 794|Homo sapiens furin (paired basic amino
acid cleaving enzyme) protein.
Length = 794
Score = 31.5 bits (68), Expect = 2.8
Identities = 15/49 (30%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Frame = +3
Query: 297 TFAWLTE-QGIFYGQLDPTSQQNSNSVVTQGSLVTYPSGPDGKEIPPLS 440
T +W + G + +++ TS+ N+ +T+ +LV Y + P+G +PP S
Sbjct: 536 THSWDEDPSGEWVLEIENTSEANNYGTLTKFTLVLYGTAPEGLPVPPES 584
>AY682080-1|AAT74625.1| 4646|Homo sapiens dynein, cytoplasmic, heavy
polypeptide 1 protein.
Length = 4646
Score = 31.5 bits (68), Expect = 2.8
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = +3
Query: 324 IFYGQLDPTSQQNSNSVVTQGSLVTYPSGPDGKEIPPLSFVLTEFHTL 467
+F G +DP +N NSV+ L+T P+G + +PP ++ E L
Sbjct: 2302 VFDGDVDPEWVENLNSVLDDNKLLTLPNG-ERLSLPPNVRIMFEVQDL 2348
>AB002323-1|BAA20783.3| 4658|Homo sapiens KIAA0325 protein protein.
Length = 4658
Score = 31.5 bits (68), Expect = 2.8
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = +3
Query: 324 IFYGQLDPTSQQNSNSVVTQGSLVTYPSGPDGKEIPPLSFVLTEFHTL 467
+F G +DP +N NSV+ L+T P+G + +PP ++ E L
Sbjct: 2314 VFDGDVDPEWVENLNSVLDDNKLLTLPNG-ERLSLPPNVRIMFEVQDL 2360
>BC103491-1|AAI03492.1| 718|Homo sapiens LON peptidase N-terminal
domain and ring finger 3 protein.
Length = 718
Score = 31.1 bits (67), Expect = 3.8
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = -3
Query: 96 CSGNPVKFYSSYGCVCPLSNVE 31
C G+PVK ++ YGC+ + NV+
Sbjct: 556 CLGDPVKGFAEYGCILEIRNVQ 577
>BC100671-1|AAI00672.1| 759|Homo sapiens LON peptidase N-terminal
domain and ring finger 3 protein.
Length = 759
Score = 31.1 bits (67), Expect = 3.8
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = -3
Query: 96 CSGNPVKFYSSYGCVCPLSNVE 31
C G+PVK ++ YGC+ + NV+
Sbjct: 597 CLGDPVKGFAEYGCILEIRNVQ 618
>BC099847-1|AAH99847.1| 759|Homo sapiens LON peptidase N-terminal
domain and ring finger 3 protein.
Length = 759
Score = 31.1 bits (67), Expect = 3.8
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = -3
Query: 96 CSGNPVKFYSSYGCVCPLSNVE 31
C G+PVK ++ YGC+ + NV+
Sbjct: 597 CLGDPVKGFAEYGCILEIRNVQ 618
>AL772284-3|CAI41520.1| 524|Homo sapiens LON peptidase N-terminal
domain and ring finger 3 protein.
Length = 524
Score = 31.1 bits (67), Expect = 3.8
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = -3
Query: 96 CSGNPVKFYSSYGCVCPLSNVE 31
C G+PVK ++ YGC+ + NV+
Sbjct: 362 CLGDPVKGFAEYGCILEIRNVQ 383
>AL772284-2|CAI41519.1| 718|Homo sapiens LON peptidase N-terminal
domain and ring finger 3 protein.
Length = 718
Score = 31.1 bits (67), Expect = 3.8
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = -3
Query: 96 CSGNPVKFYSSYGCVCPLSNVE 31
C G+PVK ++ YGC+ + NV+
Sbjct: 556 CLGDPVKGFAEYGCILEIRNVQ 577
>AK026265-1|BAB15419.1| 516|Homo sapiens protein ( Homo sapiens
cDNA: FLJ22612 fis, clone HSI04965. ).
Length = 516
Score = 31.1 bits (67), Expect = 3.8
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = -3
Query: 96 CSGNPVKFYSSYGCVCPLSNVE 31
C G+PVK ++ YGC+ + NV+
Sbjct: 354 CLGDPVKGFAEYGCILEIRNVQ 375
>BC121817-1|AAI21818.1| 209|Homo sapiens amelotin protein.
Length = 209
Score = 30.3 bits (65), Expect = 6.6
Identities = 18/45 (40%), Positives = 24/45 (53%)
Frame = +3
Query: 285 EMPKTFAWLTEQGIFYGQLDPTSQQNSNSVVTQGSLVTYPSGPDG 419
E+P+ F L +F G + PTSQ +N V GSL P+G G
Sbjct: 118 ELPQIFTSLIIHSLFPGGILPTSQAGANPDVQDGSL---PAGGAG 159
>BC121812-1|AAI21813.1| 208|Homo sapiens amelotin protein.
Length = 208
Score = 30.3 bits (65), Expect = 6.6
Identities = 18/45 (40%), Positives = 24/45 (53%)
Frame = +3
Query: 285 EMPKTFAWLTEQGIFYGQLDPTSQQNSNSVVTQGSLVTYPSGPDG 419
E+P+ F L +F G + PTSQ +N V GSL P+G G
Sbjct: 117 ELPQIFTSLIIHSLFPGGILPTSQAGANPDVQDGSL---PAGGAG 158
>BC063479-1|AAH63479.1| 374|Homo sapiens LARP4 protein protein.
Length = 374
Score = 30.3 bits (65), Expect = 6.6
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +1
Query: 532 LLGSSWETQNNNTRLEEKTDLGVYGKKDISLQ 627
+ SS ET N T +EE TD + G +D+S Q
Sbjct: 71 MYSSSCETTRNTTGIEESTDGMILGPEDLSYQ 102
>BC022377-1|AAH22377.1| 188|Homo sapiens LARP4 protein protein.
Length = 188
Score = 30.3 bits (65), Expect = 6.6
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +1
Query: 532 LLGSSWETQNNNTRLEEKTDLGVYGKKDISLQ 627
+ SS ET N T +EE TD + G +D+S Q
Sbjct: 1 MYSSSCETTRNTTGIEESTDGMILGPEDLSYQ 32
>AY358528-1|AAQ88892.1| 209|Homo sapiens RSTI689 protein.
Length = 209
Score = 30.3 bits (65), Expect = 6.6
Identities = 18/45 (40%), Positives = 24/45 (53%)
Frame = +3
Query: 285 EMPKTFAWLTEQGIFYGQLDPTSQQNSNSVVTQGSLVTYPSGPDG 419
E+P+ F L +F G + PTSQ +N V GSL P+G G
Sbjct: 118 ELPQIFTSLIIHSLFPGGILPTSQAGANPDVQDGSL---PAGGAG 159
>AY004310-1|AAF86614.1| 375|Homo sapiens c-Mpl binding protein
protein.
Length = 375
Score = 30.3 bits (65), Expect = 6.6
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +1
Query: 532 LLGSSWETQNNNTRLEEKTDLGVYGKKDISLQ 627
+ SS ET N T +EE TD + G +D+S Q
Sbjct: 1 MYSSSCETTRNTTGIEESTDGMILGPEDLSYQ 32
>AK125113-1|BAC86052.1| 654|Homo sapiens protein ( Homo sapiens
cDNA FLJ43123 fis, clone CTONG3003972. ).
Length = 654
Score = 30.3 bits (65), Expect = 6.6
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +1
Query: 532 LLGSSWETQNNNTRLEEKTDLGVYGKKDISLQ 627
+ SS ET N T +EE TD + G +D+S Q
Sbjct: 1 MYSSSCETTRNTTGIEESTDGMILGPEDLSYQ 32
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 105,952,498
Number of Sequences: 237096
Number of extensions: 2418630
Number of successful extensions: 5439
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 5214
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5436
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7647512560
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -