Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20379
         (780 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired pr...    24   1.2  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    23   2.7  
DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc gr...    23   3.6  
AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esteras...    23   3.6  
AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.      23   3.6  
AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.      23   3.6  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   6.3  
AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esteras...    22   6.3  

>DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired
           protein.
          Length = 311

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 8/27 (29%), Positives = 17/27 (62%)
 Frame = +3

Query: 183 HRQDHRGWRRFFQHFLQRDRSWQAVPR 263
           +R++ +GW+   +H L  ++ +  VPR
Sbjct: 120 YRENKQGWQNSIRHNLSLNKCFVKVPR 146


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 9/27 (33%), Positives = 11/27 (40%)
 Frame = -1

Query: 450 QRACGFCPKPNLRFPFQWCSDHGHSCW 370
           Q  C +   PN       C+D   SCW
Sbjct: 15  QLECNWSSGPNATLQSSACTDDLSSCW 41


>DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc
           growth factor 4 protein.
          Length = 431

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 14/30 (46%), Positives = 16/30 (53%)
 Frame = +3

Query: 375 NYARGHYTIGKEIVDLVLDRIRKLADQCTG 464
           +YAR     G  IVD+ LD  R L   CTG
Sbjct: 392 SYARAKGLGGIAIVDITLDDFRGL---CTG 418


>AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esterase
           protein.
          Length = 515

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 13/53 (24%), Positives = 22/53 (41%)
 Frame = -3

Query: 583 DGELQFRLLAVVNGETLHQ*GSEPRPVPPPKEWKIRNPCRPVHWSASLRILSK 425
           +G+L  ++   +NGE        P   PP    + + P  P  W+     LS+
Sbjct: 8   EGKLLGKISTNINGEEFCSFQGVPYAQPPIGHLRFKAPQAPQPWTGIRDALSE 60


>AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.
          Length = 515

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 13/53 (24%), Positives = 22/53 (41%)
 Frame = -3

Query: 583 DGELQFRLLAVVNGETLHQ*GSEPRPVPPPKEWKIRNPCRPVHWSASLRILSK 425
           +G+L  ++   +NGE        P   PP    + + P  P  W+     LS+
Sbjct: 8   EGKLLGKISTNINGEEFCSFQGVPYAQPPIGHLRFKAPQAPQPWTGIRDALSE 60


>AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.
          Length = 517

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 13/53 (24%), Positives = 22/53 (41%)
 Frame = -3

Query: 583 DGELQFRLLAVVNGETLHQ*GSEPRPVPPPKEWKIRNPCRPVHWSASLRILSK 425
           +G+L  ++   +NGE        P   PP    + + P  P  W+     LS+
Sbjct: 10  EGKLLGKISTNINGEEFCSFQGVPYAQPPIGHLRFKAPQAPQPWTGIRDALSE 62


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = -2

Query: 716  YGGRCHRWLHC 684
            Y G C R+LHC
Sbjct: 1287 YPGDCTRYLHC 1297


>AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esterase
           protein.
          Length = 517

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 11/45 (24%), Positives = 19/45 (42%)
 Frame = -3

Query: 583 DGELQFRLLAVVNGETLHQ*GSEPRPVPPPKEWKIRNPCRPVHWS 449
           +G+L  ++   +NGE        P   PP    + + P  P  W+
Sbjct: 10  EGKLLGKISTNINGEEFCSFQGVPYAQPPIGHLRFKAPQAPQPWT 54


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 187,800
Number of Sequences: 336
Number of extensions: 4351
Number of successful extensions: 18
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21065107
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)