Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20379
(780 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY334011-1|AAR01136.1| 188|Anopheles gambiae beta-tubulin protein. 76 1e-15
AY334010-1|AAR01135.1| 188|Anopheles gambiae beta-tubulin protein. 76 1e-15
AY334009-1|AAR01134.1| 188|Anopheles gambiae beta-tubulin protein. 76 1e-15
AY334008-1|AAR01133.1| 188|Anopheles gambiae beta-tubulin protein. 76 1e-15
U50468-1|AAA93472.1| 91|Anopheles gambiae protein ( Anopheles ... 50 6e-08
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript... 29 0.022
AY390608-1|AAR27305.1| 242|Anopheles gambiae SP22D protein. 25 3.5
AY390607-1|AAR27304.1| 242|Anopheles gambiae SP22D protein. 25 3.5
AY390606-1|AAR27303.1| 241|Anopheles gambiae SP22D protein. 25 3.5
AY390605-1|AAR27302.1| 241|Anopheles gambiae SP22D protein. 25 3.5
AY390604-1|AAR27301.1| 241|Anopheles gambiae SP22D protein. 25 3.5
AY390603-1|AAR27300.1| 241|Anopheles gambiae SP22D protein. 25 3.5
AJ276428-1|CAB81934.1| 1322|Anopheles gambiae adhesive serine pr... 25 3.5
AF117751-1|AAD38337.3| 1322|Anopheles gambiae serine protease 22... 25 3.5
>AY334011-1|AAR01136.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 76.2 bits (179), Expect = 1e-15
Identities = 35/88 (39%), Positives = 57/88 (64%), Gaps = 2/88 (2%)
Frame = +2
Query: 509 SGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDN 688
SG +LL+ ++ +Y + +++ P+P+VS VVEPYN+ L+ H +E++D + +DN
Sbjct: 41 SGMGTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSIHQLVENTDETYCIDN 100
Query: 689 EAIYDICRRNLDIERPTY--TN*IVSST 766
EA+YDIC R L + P+Y N +VS T
Sbjct: 101 EALYDICFRTLKVPNPSYGDLNHLVSLT 128
Score = 56.4 bits (130), Expect = 9e-10
Identities = 25/42 (59%), Positives = 29/42 (69%)
Frame = +3
Query: 390 HYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGLG 515
HYT G E+VD VLD +RK + C LQGF + HS GGGTG G
Sbjct: 1 HYTEGAELVDAVLDVVRKECENCDCLQGFQLTHSLGGGTGSG 42
>AY334010-1|AAR01135.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 76.2 bits (179), Expect = 1e-15
Identities = 35/88 (39%), Positives = 57/88 (64%), Gaps = 2/88 (2%)
Frame = +2
Query: 509 SGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDN 688
SG +LL+ ++ +Y + +++ P+P+VS VVEPYN+ L+ H +E++D + +DN
Sbjct: 41 SGMGTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSIHQLVENTDETYCIDN 100
Query: 689 EAIYDICRRNLDIERPTY--TN*IVSST 766
EA+YDIC R L + P+Y N +VS T
Sbjct: 101 EALYDICFRTLKVPNPSYGDLNHLVSLT 128
Score = 56.4 bits (130), Expect = 9e-10
Identities = 25/42 (59%), Positives = 29/42 (69%)
Frame = +3
Query: 390 HYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGLG 515
HYT G E+VD VLD +RK + C LQGF + HS GGGTG G
Sbjct: 1 HYTEGAELVDAVLDVVRKECENCDCLQGFQLTHSLGGGTGSG 42
>AY334009-1|AAR01134.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 76.2 bits (179), Expect = 1e-15
Identities = 35/88 (39%), Positives = 57/88 (64%), Gaps = 2/88 (2%)
Frame = +2
Query: 509 SGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDN 688
SG +LL+ ++ +Y + +++ P+P+VS VVEPYN+ L+ H +E++D + +DN
Sbjct: 41 SGMGTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSIHQLVENTDETYCIDN 100
Query: 689 EAIYDICRRNLDIERPTY--TN*IVSST 766
EA+YDIC R L + P+Y N +VS T
Sbjct: 101 EALYDICFRTLKVPNPSYGDLNHLVSLT 128
Score = 56.4 bits (130), Expect = 9e-10
Identities = 25/42 (59%), Positives = 29/42 (69%)
Frame = +3
Query: 390 HYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGLG 515
HYT G E+VD VLD +RK + C LQGF + HS GGGTG G
Sbjct: 1 HYTEGAELVDAVLDVVRKECENCDCLQGFQLTHSLGGGTGSG 42
>AY334008-1|AAR01133.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 76.2 bits (179), Expect = 1e-15
Identities = 35/88 (39%), Positives = 57/88 (64%), Gaps = 2/88 (2%)
Frame = +2
Query: 509 SGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDN 688
SG +LL+ ++ +Y + +++ P+P+VS VVEPYN+ L+ H +E++D + +DN
Sbjct: 41 SGMGTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSIHQLVENTDETYCIDN 100
Query: 689 EAIYDICRRNLDIERPTY--TN*IVSST 766
EA+YDIC R L + P+Y N +VS T
Sbjct: 101 EALYDICFRTLKVPNPSYGDLNHLVSLT 128
Score = 56.4 bits (130), Expect = 9e-10
Identities = 25/42 (59%), Positives = 29/42 (69%)
Frame = +3
Query: 390 HYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGLG 515
HYT G E+VD VLD +RK + C LQGF + HS GGGTG G
Sbjct: 1 HYTEGAELVDAVLDVVRKECENCDCLQGFQLTHSLGGGTGSG 42
>U50468-1|AAA93472.1| 91|Anopheles gambiae protein ( Anopheles
gambiae putativetubulin alpha chain mRNA, complete cds.
).
Length = 91
Score = 50.4 bits (115), Expect = 6e-08
Identities = 20/22 (90%), Positives = 21/22 (95%)
Frame = +1
Query: 73 MRECISVHVGQAGVQIGNACWE 138
MRECISVHVGQAGVQIGN CW+
Sbjct: 1 MRECISVHVGQAGVQIGNPCWD 22
Score = 37.1 bits (82), Expect = 6e-04
Identities = 17/46 (36%), Positives = 26/46 (56%)
Frame = +2
Query: 128 PAGSFTAWSTASSLMARCPQTRPSGVETILSTLSSARPELASSTPC 265
P T WS AS+ RCP+TR S E +++ + + P LA ++ C
Sbjct: 19 PCWDCTVWSMASNRTVRCPRTRRS--EAVMTRSTPSSPRLAQASTC 62
>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
protein.
Length = 1248
Score = 28.7 bits (61), Expect(2) = 0.022
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = +2
Query: 179 CPQTRPSGVETILSTLSSARPELASSTPCCLR 274
C RPS ++ ++ S RP+LA+++ C R
Sbjct: 164 CGSARPSRIDVAFASPSICRPDLAANSATCWR 195
Score = 21.8 bits (44), Expect(2) = 0.022
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +2
Query: 122 VMPAGSFTAWSTASSLMARCPQTRPSGV 205
V+ AG F AW TA +T+P G+
Sbjct: 116 VLLAGDFNAWHTAWG----SERTKPKGI 139
>AY390608-1|AAR27305.1| 242|Anopheles gambiae SP22D protein.
Length = 242
Score = 24.6 bits (51), Expect = 3.5
Identities = 15/44 (34%), Positives = 21/44 (47%)
Frame = -2
Query: 317 CASADLINNSRFKIDEDSTGYCLPAPVSLKKVLKESSPPPMVLS 186
CA L N + + D S CLP P SL V + ++ P L+
Sbjct: 142 CAPGTLFNPNTRECDHPSKVSCLPVP-SLNSVNEPANRAPPKLA 184
>AY390607-1|AAR27304.1| 242|Anopheles gambiae SP22D protein.
Length = 242
Score = 24.6 bits (51), Expect = 3.5
Identities = 15/44 (34%), Positives = 21/44 (47%)
Frame = -2
Query: 317 CASADLINNSRFKIDEDSTGYCLPAPVSLKKVLKESSPPPMVLS 186
CA L N + + D S CLP P SL V + ++ P L+
Sbjct: 142 CAPGTLFNPNTRECDHPSKVSCLPVP-SLNSVNEPANRAPPKLA 184
>AY390606-1|AAR27303.1| 241|Anopheles gambiae SP22D protein.
Length = 241
Score = 24.6 bits (51), Expect = 3.5
Identities = 15/44 (34%), Positives = 21/44 (47%)
Frame = -2
Query: 317 CASADLINNSRFKIDEDSTGYCLPAPVSLKKVLKESSPPPMVLS 186
CA L N + + D S CLP P SL V + ++ P L+
Sbjct: 141 CAPGTLFNPNTRECDHPSKVSCLPVP-SLNSVNEPANRAPPKLA 183
>AY390605-1|AAR27302.1| 241|Anopheles gambiae SP22D protein.
Length = 241
Score = 24.6 bits (51), Expect = 3.5
Identities = 15/44 (34%), Positives = 21/44 (47%)
Frame = -2
Query: 317 CASADLINNSRFKIDEDSTGYCLPAPVSLKKVLKESSPPPMVLS 186
CA L N + + D S CLP P SL V + ++ P L+
Sbjct: 141 CAPGTLFNPNTRECDHPSKVSCLPVP-SLNSVNEPANRAPPKLA 183
>AY390604-1|AAR27301.1| 241|Anopheles gambiae SP22D protein.
Length = 241
Score = 24.6 bits (51), Expect = 3.5
Identities = 15/44 (34%), Positives = 21/44 (47%)
Frame = -2
Query: 317 CASADLINNSRFKIDEDSTGYCLPAPVSLKKVLKESSPPPMVLS 186
CA L N + + D S CLP P SL V + ++ P L+
Sbjct: 141 CAPGTLFNPNTRECDHPSKVSCLPVP-SLNSVNEPANRAPPKLA 183
>AY390603-1|AAR27300.1| 241|Anopheles gambiae SP22D protein.
Length = 241
Score = 24.6 bits (51), Expect = 3.5
Identities = 15/44 (34%), Positives = 21/44 (47%)
Frame = -2
Query: 317 CASADLINNSRFKIDEDSTGYCLPAPVSLKKVLKESSPPPMVLS 186
CA L N + + D S CLP P SL V + ++ P L+
Sbjct: 141 CAPGTLFNPNTRECDHPSKVSCLPVP-SLNSVNEPANRAPPKLA 183
>AJ276428-1|CAB81934.1| 1322|Anopheles gambiae adhesive serine
protease protein.
Length = 1322
Score = 24.6 bits (51), Expect = 3.5
Identities = 15/44 (34%), Positives = 21/44 (47%)
Frame = -2
Query: 317 CASADLINNSRFKIDEDSTGYCLPAPVSLKKVLKESSPPPMVLS 186
CA L N + + D S CLP P SL V + ++ P L+
Sbjct: 213 CAPGTLFNPNTRECDHPSKVSCLPVP-SLNSVNEPANRAPPKLA 255
>AF117751-1|AAD38337.3| 1322|Anopheles gambiae serine protease 22D
protein.
Length = 1322
Score = 24.6 bits (51), Expect = 3.5
Identities = 15/44 (34%), Positives = 21/44 (47%)
Frame = -2
Query: 317 CASADLINNSRFKIDEDSTGYCLPAPVSLKKVLKESSPPPMVLS 186
CA L N + + D S CLP P SL V + ++ P L+
Sbjct: 212 CAPGTLFNPNTRECDHPSKVSCLPVP-SLNSVNEPANRAPPKLA 254
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 859,167
Number of Sequences: 2352
Number of extensions: 18818
Number of successful extensions: 57
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 51
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 57
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 81497388
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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