Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20379
         (780 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    28   0.11 
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    28   0.11 
DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    23   4.2  
AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        23   4.2  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        23   4.2  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        23   4.2  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             23   4.2  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    22   5.6  
AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase ...    22   7.4  
AB264333-1|BAF44088.1|   36|Apis mellifera ecdysone-induced prot...    22   7.4  
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    22   7.4  

>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 27.9 bits (59), Expect = 0.11
 Identities = 11/18 (61%), Positives = 14/18 (77%)
 Frame = +3

Query: 465 LQGFLIFHSFGGGTGLGS 518
           L+G +I HS+GGG G GS
Sbjct: 656 LRGSIIDHSYGGGFGFGS 673


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 27.9 bits (59), Expect = 0.11
 Identities = 11/18 (61%), Positives = 14/18 (77%)
 Frame = +3

Query: 465 LQGFLIFHSFGGGTGLGS 518
           L+G +I HS+GGG G GS
Sbjct: 694 LRGSIIDHSYGGGFGFGS 711


>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 8/10 (80%), Positives = 9/10 (90%)
 Frame = -3

Query: 136 PSRHYRSGLR 107
           P RHYRSGL+
Sbjct: 139 PLRHYRSGLK 148


>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 11/27 (40%), Positives = 13/27 (48%)
 Frame = -3

Query: 199 RWSCLWASGHQAGCRAPGSKAPSRHYR 119
           RW C W+ G    C+A    A SR  R
Sbjct: 387 RW-CTWSEGDLEKCKALTRAAYSRDVR 412


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 11/27 (40%), Positives = 13/27 (48%)
 Frame = -3

Query: 199 RWSCLWASGHQAGCRAPGSKAPSRHYR 119
           RW C W+ G    C+A    A SR  R
Sbjct: 387 RW-CTWSEGDLEKCKALTRAAYSRDVR 412


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 11/27 (40%), Positives = 13/27 (48%)
 Frame = -3

Query: 199 RWSCLWASGHQAGCRAPGSKAPSRHYR 119
           RW C W+ G    C+A    A SR  R
Sbjct: 387 RW-CTWSEGDLEKCKALTRAAYSRDVR 412


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -3

Query: 511 RPVPPPKEWKIRNPC 467
           R  PPP++WK  + C
Sbjct: 413 RTSPPPEDWKPLDKC 427


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 11/29 (37%), Positives = 14/29 (48%)
 Frame = +3

Query: 693 PSMTSAAVISTLSAQPTPTESSHRQIVSS 779
           P   SAA  S+ S  P P  S+   +V S
Sbjct: 827 PRYLSAAATSSTSTSPRPASSTAATLVLS 855


>AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase
           protein.
          Length = 492

 Score = 21.8 bits (44), Expect = 7.4
 Identities = 9/14 (64%), Positives = 9/14 (64%)
 Frame = +2

Query: 482 LPLLRWRYRSGFTS 523
           LPLL W Y  GF S
Sbjct: 158 LPLLVWIYGGGFMS 171


>AB264333-1|BAF44088.1|   36|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 36

 Score = 21.8 bits (44), Expect = 7.4
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = +2

Query: 170 MARCPQTRPSGVETILSTLSSARPE 244
           +A+ P      + T+ ST+SSA+PE
Sbjct: 7   VAQLPHHLSPNMPTMDSTVSSAKPE 31


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 21.8 bits (44), Expect = 7.4
 Identities = 9/14 (64%), Positives = 9/14 (64%)
 Frame = +2

Query: 482 LPLLRWRYRSGFTS 523
           LPLL W Y  GF S
Sbjct: 158 LPLLVWIYGGGFMS 171


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 221,888
Number of Sequences: 438
Number of extensions: 5416
Number of successful extensions: 12
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24518154
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)