Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20379
(780 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly ide... 172 2e-43
At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly ide... 172 2e-43
At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2) id... 172 2e-43
At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4) ne... 172 2e-43
At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5) ne... 171 3e-43
At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3) ne... 171 3e-43
At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly ide... 168 3e-42
At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly iden... 111 4e-25
At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8) ide... 110 1e-24
At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical t... 110 1e-24
At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly iden... 110 1e-24
At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly iden... 108 4e-24
At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) near... 107 6e-24
At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) near... 107 6e-24
At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly iden... 107 8e-24
At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly iden... 103 1e-22
At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin... 74 1e-13
At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin... 73 2e-13
At4g38980.1 68417.m05523 expressed protein 32 0.49
At3g57510.1 68416.m06402 endo-polygalacturonase (ADPG1) identica... 30 2.0
At1g80580.1 68414.m09453 ethylene-responsive element-binding fam... 30 2.0
At1g24460.1 68414.m03081 myosin-related contains TIGRFAM TIGR016... 30 2.0
At5g09370.1 68418.m01085 protease inhibitor/seed storage/lipid t... 29 3.5
At1g08250.1 68414.m00910 prephenate dehydratase family protein c... 29 3.5
At5g11040.1 68418.m01290 expressed protein weak similarity to hy... 28 6.0
At4g24560.1 68417.m03520 ubiquitin-specific protease 16, putativ... 28 6.0
At2g31690.1 68415.m03868 lipase class 3 family protein similar t... 28 8.0
At1g61140.1 68414.m06888 SNF2 domain-containing protein / helica... 28 8.0
>At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 450
Score = 172 bits (419), Expect = 2e-43
Identities = 82/104 (78%), Positives = 90/104 (86%), Gaps = 2/104 (1%)
Frame = +3
Query: 216 FQHFLQRDRSWQAVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 395
F F + + VPRAVFVDLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHY
Sbjct: 49 FNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHY 108
Query: 396 TIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGT--GLGSL 521
TIGKEIVDL LDRIRKLAD CTGLQGFL+F++ GGGT GLGSL
Sbjct: 109 TIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSL 152
Score = 136 bits (330), Expect = 1e-32
Identities = 60/80 (75%), Positives = 73/80 (91%)
Frame = +2
Query: 509 SGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDN 688
SG SLL+ERLSVDYGKKSKL F +YP+PQVST+VVEPYNS+L+TH+ LEH+D + ++DN
Sbjct: 147 SGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSILLDN 206
Query: 689 EAIYDICRRNLDIERPTYTN 748
EAIYDICRR+L+IERPTYTN
Sbjct: 207 EAIYDICRRSLNIERPTYTN 226
Score = 134 bits (325), Expect = 5e-32
Identities = 54/63 (85%), Positives = 60/63 (95%)
Frame = +1
Query: 73 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 252
MRECIS+H+GQAG+Q+GNACWELYCLEHGIQPDGQMP DKT+GGGDD+FNTFFSETGAGK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 253 QYP 261
P
Sbjct: 61 HVP 63
>At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 427
Score = 172 bits (419), Expect = 2e-43
Identities = 82/104 (78%), Positives = 90/104 (86%), Gaps = 2/104 (1%)
Frame = +3
Query: 216 FQHFLQRDRSWQAVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 395
F F + + VPRAVFVDLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHY
Sbjct: 49 FNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHY 108
Query: 396 TIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGT--GLGSL 521
TIGKEIVDL LDRIRKLAD CTGLQGFL+F++ GGGT GLGSL
Sbjct: 109 TIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSL 152
Score = 136 bits (330), Expect = 1e-32
Identities = 60/80 (75%), Positives = 73/80 (91%)
Frame = +2
Query: 509 SGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDN 688
SG SLL+ERLSVDYGKKSKL F +YP+PQVST+VVEPYNS+L+TH+ LEH+D + ++DN
Sbjct: 147 SGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSILLDN 206
Query: 689 EAIYDICRRNLDIERPTYTN 748
EAIYDICRR+L+IERPTYTN
Sbjct: 207 EAIYDICRRSLNIERPTYTN 226
Score = 134 bits (325), Expect = 5e-32
Identities = 54/63 (85%), Positives = 60/63 (95%)
Frame = +1
Query: 73 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 252
MRECIS+H+GQAG+Q+GNACWELYCLEHGIQPDGQMP DKT+GGGDD+FNTFFSETGAGK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 253 QYP 261
P
Sbjct: 61 HVP 63
>At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2)
identical to tubulin alpha-2/alpha-4 chain SP|P29510
GB:P29510 from [Arabidopsis thaliana]
Length = 450
Score = 172 bits (419), Expect = 2e-43
Identities = 82/104 (78%), Positives = 90/104 (86%), Gaps = 2/104 (1%)
Frame = +3
Query: 216 FQHFLQRDRSWQAVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 395
F F + + VPRAVFVDLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHY
Sbjct: 49 FNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHY 108
Query: 396 TIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGT--GLGSL 521
TIGKEIVDL LDRIRKLAD CTGLQGFL+F++ GGGT GLGSL
Sbjct: 109 TIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSL 152
Score = 136 bits (329), Expect = 2e-32
Identities = 60/80 (75%), Positives = 72/80 (90%)
Frame = +2
Query: 509 SGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDN 688
SG SLL+ERLSVDYGKKSKL F +YP+PQVST+VVEPYNS+L+TH+ LEH+D + ++DN
Sbjct: 147 SGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSILLDN 206
Query: 689 EAIYDICRRNLDIERPTYTN 748
EAIYDICRR+L IERPTYTN
Sbjct: 207 EAIYDICRRSLSIERPTYTN 226
Score = 136 bits (328), Expect = 2e-32
Identities = 54/63 (85%), Positives = 61/63 (96%)
Frame = +1
Query: 73 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 252
MRECIS+H+GQAG+Q+GNACWELYCLEHGIQPDGQMP+DKT+GGGDD+FNTFFSETGAGK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60
Query: 253 QYP 261
P
Sbjct: 61 HVP 63
>At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4)
nearly identical to SP:P29510 Tubulin alpha-2/alpha-4
chain from [Arabidopsis thaliana]
Length = 450
Score = 172 bits (419), Expect = 2e-43
Identities = 82/104 (78%), Positives = 90/104 (86%), Gaps = 2/104 (1%)
Frame = +3
Query: 216 FQHFLQRDRSWQAVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 395
F F + + VPRAVFVDLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHY
Sbjct: 49 FNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHY 108
Query: 396 TIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGT--GLGSL 521
TIGKEIVDL LDRIRKLAD CTGLQGFL+F++ GGGT GLGSL
Sbjct: 109 TIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSL 152
Score = 136 bits (329), Expect = 2e-32
Identities = 60/80 (75%), Positives = 72/80 (90%)
Frame = +2
Query: 509 SGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDN 688
SG SLL+ERLSVDYGKKSKL F +YP+PQVST+VVEPYNS+L+TH+ LEH+D + ++DN
Sbjct: 147 SGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSILLDN 206
Query: 689 EAIYDICRRNLDIERPTYTN 748
EAIYDICRR+L IERPTYTN
Sbjct: 207 EAIYDICRRSLSIERPTYTN 226
Score = 136 bits (328), Expect = 2e-32
Identities = 54/63 (85%), Positives = 61/63 (96%)
Frame = +1
Query: 73 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 252
MRECIS+H+GQAG+Q+GNACWELYCLEHGIQPDGQMP+DKT+GGGDD+FNTFFSETGAGK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60
Query: 253 QYP 261
P
Sbjct: 61 HVP 63
>At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 171 bits (417), Expect = 3e-43
Identities = 80/104 (76%), Positives = 90/104 (86%), Gaps = 2/104 (1%)
Frame = +3
Query: 216 FQHFLQRDRSWQAVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 395
F F + + VPRAVFVDLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHY
Sbjct: 49 FNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHY 108
Query: 396 TIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGT--GLGSL 521
T+GKEIVDL LDR+RKLAD CTGLQGFL+F++ GGGT GLGSL
Sbjct: 109 TVGKEIVDLCLDRVRKLADNCTGLQGFLVFNAVGGGTGSGLGSL 152
Score = 141 bits (341), Expect = 5e-34
Identities = 64/80 (80%), Positives = 73/80 (91%)
Frame = +2
Query: 509 SGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDN 688
SG SLL+ERLSVDYGKKSKL F IYP+PQVSTAVVEPYNS+L+TH+ LEH+D A ++DN
Sbjct: 147 SGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDN 206
Query: 689 EAIYDICRRNLDIERPTYTN 748
EAIYDICRR+LDIERPTYTN
Sbjct: 207 EAIYDICRRSLDIERPTYTN 226
Score = 117 bits (282), Expect = 8e-27
Identities = 47/63 (74%), Positives = 55/63 (87%)
Frame = +1
Query: 73 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 252
MRE IS+H+GQAG+Q+GN+CWELYCLEHGIQPDG MP+D T+G D+FNTFFSETGAGK
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 253 QYP 261
P
Sbjct: 61 HVP 63
>At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 171 bits (417), Expect = 3e-43
Identities = 80/104 (76%), Positives = 90/104 (86%), Gaps = 2/104 (1%)
Frame = +3
Query: 216 FQHFLQRDRSWQAVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 395
F F + + VPRAVFVDLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHY
Sbjct: 49 FNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHY 108
Query: 396 TIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGT--GLGSL 521
T+GKEIVDL LDR+RKLAD CTGLQGFL+F++ GGGT GLGSL
Sbjct: 109 TVGKEIVDLCLDRVRKLADNCTGLQGFLVFNAVGGGTGSGLGSL 152
Score = 141 bits (341), Expect = 5e-34
Identities = 64/80 (80%), Positives = 73/80 (91%)
Frame = +2
Query: 509 SGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDN 688
SG SLL+ERLSVDYGKKSKL F IYP+PQVSTAVVEPYNS+L+TH+ LEH+D A ++DN
Sbjct: 147 SGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDN 206
Query: 689 EAIYDICRRNLDIERPTYTN 748
EAIYDICRR+LDIERPTYTN
Sbjct: 207 EAIYDICRRSLDIERPTYTN 226
Score = 117 bits (282), Expect = 8e-27
Identities = 47/63 (74%), Positives = 55/63 (87%)
Frame = +1
Query: 73 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 252
MRE IS+H+GQAG+Q+GN+CWELYCLEHGIQPDG MP+D T+G D+FNTFFSETGAGK
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 253 QYP 261
P
Sbjct: 61 HVP 63
>At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly
identical to SP|P11139 Tubulin alpha-1 chain
{Arabidopsis thaliana}
Length = 450
Score = 168 bits (409), Expect = 3e-42
Identities = 78/104 (75%), Positives = 89/104 (85%), Gaps = 2/104 (1%)
Frame = +3
Query: 216 FQHFLQRDRSWQAVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 395
F F S Q VPRAVF+DLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHY
Sbjct: 49 FNTFFSETSSGQHVPRAVFLDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHY 108
Query: 396 TIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGT--GLGSL 521
T+G+EIVD L+R+RKLAD CTGLQGFL+F++ GGGT GLGSL
Sbjct: 109 TVGREIVDTCLERLRKLADNCTGLQGFLVFNAVGGGTGSGLGSL 152
Score = 136 bits (329), Expect = 2e-32
Identities = 61/80 (76%), Positives = 72/80 (90%)
Frame = +2
Query: 509 SGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDN 688
SG SLL+ERLSVD+GKKSKL F IYP+PQVSTAVVEPYNS+L+TH+ LEH+D ++DN
Sbjct: 147 SGLGSLLLERLSVDFGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVVVLLDN 206
Query: 689 EAIYDICRRNLDIERPTYTN 748
EAIYDICRR+LDIERPTY+N
Sbjct: 207 EAIYDICRRSLDIERPTYSN 226
Score = 112 bits (269), Expect = 3e-25
Identities = 44/63 (69%), Positives = 54/63 (85%)
Frame = +1
Query: 73 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 252
MRE IS+H+GQAG+Q+GN+CWELYCLEHGIQPDG MP+D T+G D+FNTFFSET +G+
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGTMPSDSTVGACHDAFNTFFSETSSGQ 60
Query: 253 QYP 261
P
Sbjct: 61 HVP 63
>At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly
identical to SP|P29514 Tubulin beta-6 chain {Arabidopsis
thaliana}
Length = 449
Score = 111 bits (268), Expect = 4e-25
Identities = 48/87 (55%), Positives = 62/87 (71%)
Frame = +3
Query: 255 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 434
VPRA+ +DLEP +D VRTG Y Q+F P+ + G+ A NN+A+GHYT G E++D VLD
Sbjct: 60 VPRAILMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDV 119
Query: 435 IRKLADQCTGLQGFLIFHSFGGGTGLG 515
+RK A+ C LQGF + HS GGGTG G
Sbjct: 120 VRKEAENCDCLQGFQVCHSLGGGTGSG 146
Score = 79.8 bits (188), Expect = 2e-15
Identities = 35/88 (39%), Positives = 60/88 (68%), Gaps = 2/88 (2%)
Frame = +2
Query: 509 SGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDN 688
SG +LL+ ++ +Y + L F+++P+P+VS VVEPYN+ L+ H +E++D ++DN
Sbjct: 145 SGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDN 204
Query: 689 EAIYDICRRNLDIERPTY--TN*IVSST 766
EA+YDIC R L + P++ N ++S+T
Sbjct: 205 EALYDICFRTLKLTTPSFGDLNHLISAT 232
Score = 48.4 bits (110), Expect = 5e-06
Identities = 24/66 (36%), Positives = 35/66 (53%), Gaps = 3/66 (4%)
Frame = +1
Query: 73 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGD---DSFNTFFSETG 243
MRE + + GQ G QIG+ WE+ C EHGI P G + +G D + N +++E
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTG-----RYVGNSDLQLERVNVYYNEAS 55
Query: 244 AGKQYP 261
G+ P
Sbjct: 56 CGRYVP 61
>At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8)
identical to SP|P29516 Tubulin beta-8 chain {Arabidopsis
thaliana}; supporting cDNA gi|15451225|gb|AY054693.1|
Length = 449
Score = 110 bits (264), Expect = 1e-24
Identities = 48/87 (55%), Positives = 62/87 (71%)
Frame = +3
Query: 255 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 434
VPRAV +DLEP +D VR+G Y Q+F P+ + G+ A NN+A+GHYT G E++D VLD
Sbjct: 60 VPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDV 119
Query: 435 IRKLADQCTGLQGFLIFHSFGGGTGLG 515
+RK A+ C LQGF + HS GGGTG G
Sbjct: 120 VRKEAENCDCLQGFQVCHSLGGGTGSG 146
Score = 79.8 bits (188), Expect = 2e-15
Identities = 35/88 (39%), Positives = 60/88 (68%), Gaps = 2/88 (2%)
Frame = +2
Query: 509 SGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDN 688
SG +LL+ ++ +Y + L F+++P+P+VS VVEPYN+ L+ H +E++D ++DN
Sbjct: 145 SGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDN 204
Query: 689 EAIYDICRRNLDIERPTY--TN*IVSST 766
EA+YDIC R L + P++ N ++S+T
Sbjct: 205 EALYDICFRTLKLTTPSFGDLNHLISAT 232
Score = 44.4 bits (100), Expect = 9e-05
Identities = 21/63 (33%), Positives = 32/63 (50%)
Frame = +1
Query: 73 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 252
MRE + + GQ G QIG WE+ C EHGI G+ + + + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYQGENDL--QLERVNVYYNEASCGR 58
Query: 253 QYP 261
P
Sbjct: 59 FVP 61
>At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical to
GB:M84704 SP|P29515 Tubulin beta-7 chain {Arabidopsis
thaliana}
Length = 449
Score = 110 bits (264), Expect = 1e-24
Identities = 48/87 (55%), Positives = 62/87 (71%)
Frame = +3
Query: 255 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 434
VPRAV +DLEP +D VR+G Y Q+F P+ + G+ A NN+A+GHYT G E++D VLD
Sbjct: 60 VPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDV 119
Query: 435 IRKLADQCTGLQGFLIFHSFGGGTGLG 515
+RK A+ C LQGF + HS GGGTG G
Sbjct: 120 VRKEAENCDCLQGFQVCHSLGGGTGSG 146
Score = 79.4 bits (187), Expect = 2e-15
Identities = 34/88 (38%), Positives = 60/88 (68%), Gaps = 2/88 (2%)
Frame = +2
Query: 509 SGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDN 688
SG +LL+ ++ +Y + + F+++P+P+VS VVEPYN+ L+ H +E++D ++DN
Sbjct: 145 SGMGTLLISKIREEYPDRMMMTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDN 204
Query: 689 EAIYDICRRNLDIERPTY--TN*IVSST 766
EA+YDIC R L + P++ N ++S+T
Sbjct: 205 EALYDICFRTLKLSTPSFGDLNHLISAT 232
Score = 44.8 bits (101), Expect = 7e-05
Identities = 22/63 (34%), Positives = 33/63 (52%)
Frame = +1
Query: 73 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 252
MRE + + GQ G QIG+ WE+ LEHGI G+ D + + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVNLEHGIDQTGRYVGDSEL--QLERVNVYYNEASCGR 58
Query: 253 QYP 261
P
Sbjct: 59 YVP 61
>At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly
identical to SP|P12411 Tubulin beta-1 chain {Arabidopsis
thaliana}
Length = 447
Score = 110 bits (264), Expect = 1e-24
Identities = 47/87 (54%), Positives = 62/87 (71%)
Frame = +3
Query: 255 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 434
VPRAV +DLEP +D +R+G Y Q+F P+ + G+ A NN+A+GHYT G E++D VLD
Sbjct: 61 VPRAVLMDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDV 120
Query: 435 IRKLADQCTGLQGFLIFHSFGGGTGLG 515
+RK A+ C LQGF + HS GGGTG G
Sbjct: 121 VRKEAENCDCLQGFQVCHSLGGGTGSG 147
Score = 80.2 bits (189), Expect = 1e-15
Identities = 35/88 (39%), Positives = 60/88 (68%), Gaps = 2/88 (2%)
Frame = +2
Query: 509 SGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDN 688
SG +LL+ ++ +Y + L F+++P+P+VS VVEPYN+ L+ H +E++D ++DN
Sbjct: 146 SGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDN 205
Query: 689 EAIYDICRRNLDIERPTY--TN*IVSST 766
EA+YDIC R L + P++ N ++S+T
Sbjct: 206 EALYDICFRTLKLSTPSFGDLNHLISAT 233
Score = 48.4 bits (110), Expect = 5e-06
Identities = 23/63 (36%), Positives = 34/63 (53%)
Frame = +1
Query: 73 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 252
MRE + V GQ G QIG+ WE+ C EHG+ P G+ D + + N +++E G+
Sbjct: 1 MREILHVQGGQCGNQIGSKFWEVICDEHGVDPTGRYNGD-SADLQLERINVYYNEASGGR 59
Query: 253 QYP 261
P
Sbjct: 60 YVP 62
>At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly
identical to SP|P29513 Tubulin beta-5 chain {Arabidopsis
thaliana}
Length = 449
Score = 108 bits (260), Expect = 4e-24
Identities = 46/87 (52%), Positives = 62/87 (71%)
Frame = +3
Query: 255 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 434
VPRAV +DLEP +D +R+G + Q+F P+ + G+ A NN+A+GHYT G E++D VLD
Sbjct: 61 VPRAVLMDLEPGTMDSIRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDV 120
Query: 435 IRKLADQCTGLQGFLIFHSFGGGTGLG 515
+RK A+ C LQGF + HS GGGTG G
Sbjct: 121 VRKEAENCDCLQGFQVCHSLGGGTGSG 147
Score = 80.2 bits (189), Expect = 1e-15
Identities = 35/88 (39%), Positives = 60/88 (68%), Gaps = 2/88 (2%)
Frame = +2
Query: 509 SGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDN 688
SG +LL+ ++ +Y + L F+++P+P+VS VVEPYN+ L+ H +E++D ++DN
Sbjct: 146 SGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDN 205
Query: 689 EAIYDICRRNLDIERPTY--TN*IVSST 766
EA+YDIC R L + P++ N ++S+T
Sbjct: 206 EALYDICFRTLKLSTPSFGDLNHLISAT 233
Score = 47.2 bits (107), Expect = 1e-05
Identities = 23/63 (36%), Positives = 33/63 (52%)
Frame = +1
Query: 73 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 252
MRE + + GQ G QIG+ WE+ C EHGI G+ D T + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVICDEHGIDSTGRYSGD-TADLQLERINVYYNEASGGR 59
Query: 253 QYP 261
P
Sbjct: 60 YVP 62
>At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 107 bits (258), Expect = 6e-24
Identities = 47/87 (54%), Positives = 61/87 (70%)
Frame = +3
Query: 255 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 434
VPRAV +DLEP +D +R+G Y Q F P+ + G+ A NN+A+GHYT G E++D VLD
Sbjct: 60 VPRAVLMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDV 119
Query: 435 IRKLADQCTGLQGFLIFHSFGGGTGLG 515
+RK A+ C LQGF + HS GGGTG G
Sbjct: 120 VRKEAENCDCLQGFQVCHSLGGGTGSG 146
Score = 79.8 bits (188), Expect = 2e-15
Identities = 35/88 (39%), Positives = 60/88 (68%), Gaps = 2/88 (2%)
Frame = +2
Query: 509 SGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDN 688
SG +LL+ ++ +Y + L F+++P+P+VS VVEPYN+ L+ H +E++D ++DN
Sbjct: 145 SGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDN 204
Query: 689 EAIYDICRRNLDIERPTY--TN*IVSST 766
EA+YDIC R L + P++ N ++S+T
Sbjct: 205 EALYDICFRTLKLTTPSFGDLNHLISAT 232
Score = 49.6 bits (113), Expect = 2e-06
Identities = 23/63 (36%), Positives = 33/63 (52%)
Frame = +1
Query: 73 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 252
MRE + + GQ G QIG WE+ C EHGI P G+ D + + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDL--QLERINVYYNEASCGR 58
Query: 253 QYP 261
P
Sbjct: 59 FVP 61
>At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 107 bits (258), Expect = 6e-24
Identities = 47/87 (54%), Positives = 61/87 (70%)
Frame = +3
Query: 255 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 434
VPRAV +DLEP +D +R+G Y Q F P+ + G+ A NN+A+GHYT G E++D VLD
Sbjct: 60 VPRAVLMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDV 119
Query: 435 IRKLADQCTGLQGFLIFHSFGGGTGLG 515
+RK A+ C LQGF + HS GGGTG G
Sbjct: 120 VRKEAENCDCLQGFQVCHSLGGGTGSG 146
Score = 79.8 bits (188), Expect = 2e-15
Identities = 35/88 (39%), Positives = 60/88 (68%), Gaps = 2/88 (2%)
Frame = +2
Query: 509 SGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDN 688
SG +LL+ ++ +Y + L F+++P+P+VS VVEPYN+ L+ H +E++D ++DN
Sbjct: 145 SGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDN 204
Query: 689 EAIYDICRRNLDIERPTY--TN*IVSST 766
EA+YDIC R L + P++ N ++S+T
Sbjct: 205 EALYDICFRTLKLTTPSFGDLNHLISAT 232
Score = 49.6 bits (113), Expect = 2e-06
Identities = 23/63 (36%), Positives = 33/63 (52%)
Frame = +1
Query: 73 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 252
MRE + + GQ G QIG WE+ C EHGI P G+ D + + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDL--QLERINVYYNEASCGR 58
Query: 253 QYP 261
P
Sbjct: 59 FVP 61
>At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly
identical to SP|P29517 Tubulin beta-9 chain {Arabidopsis
thaliana}
Length = 444
Score = 107 bits (257), Expect = 8e-24
Identities = 46/87 (52%), Positives = 62/87 (71%)
Frame = +3
Query: 255 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 434
VPRAV +DLEP +D +R+G + Q+F P+ + G+ A NN+A+GHYT G E++D VLD
Sbjct: 60 VPRAVLMDLEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDV 119
Query: 435 IRKLADQCTGLQGFLIFHSFGGGTGLG 515
+RK A+ C LQGF + HS GGGTG G
Sbjct: 120 VRKEAENCDCLQGFQVCHSLGGGTGSG 146
Score = 81.0 bits (191), Expect = 8e-16
Identities = 35/88 (39%), Positives = 60/88 (68%), Gaps = 2/88 (2%)
Frame = +2
Query: 509 SGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDN 688
SG +LL+ ++ +Y + + F+++P+P+VS VVEPYN+ L+ H +E++D ++DN
Sbjct: 145 SGMGTLLISKIREEYPDRMMMTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDN 204
Query: 689 EAIYDICRRNLDIERPTY--TN*IVSST 766
EA+YDIC R L + PT+ N ++S+T
Sbjct: 205 EALYDICFRTLKLANPTFGDLNHLISAT 232
Score = 48.8 bits (111), Expect = 4e-06
Identities = 25/63 (39%), Positives = 32/63 (50%)
Frame = +1
Query: 73 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 252
MRE + + GQ G QIG WE+ C EHGI GQ D + + N +F+E GK
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICGEHGIDQTGQSCGDTDL--QLERINVYFNEASGGK 58
Query: 253 QYP 261
P
Sbjct: 59 YVP 61
>At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly
identical to SP|P24636 Tubulin beta-4 chain {Arabidopsis
thaliana}
Length = 444
Score = 103 bits (247), Expect = 1e-22
Identities = 45/87 (51%), Positives = 61/87 (70%)
Frame = +3
Query: 255 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 434
VPRAV +DLEP +D +R+G + Q+F P+ + G+ A NN+A+GHYT G E++D VLD
Sbjct: 60 VPRAVLMDLEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDV 119
Query: 435 IRKLADQCTGLQGFLIFHSFGGGTGLG 515
+RK A+ LQGF + HS GGGTG G
Sbjct: 120 VRKEAENSDCLQGFQVCHSLGGGTGSG 146
Score = 81.0 bits (191), Expect = 8e-16
Identities = 35/88 (39%), Positives = 60/88 (68%), Gaps = 2/88 (2%)
Frame = +2
Query: 509 SGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDN 688
SG +LL+ ++ +Y + + F+++P+P+VS VVEPYN+ L+ H +E++D ++DN
Sbjct: 145 SGMGTLLISKIREEYPDRMMMTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDN 204
Query: 689 EAIYDICRRNLDIERPTY--TN*IVSST 766
EA+YDIC R L + PT+ N ++S+T
Sbjct: 205 EALYDICFRTLKLANPTFGDLNHLISAT 232
Score = 47.2 bits (107), Expect = 1e-05
Identities = 24/63 (38%), Positives = 32/63 (50%)
Frame = +1
Query: 73 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 252
MRE + + GQ G QIG WE+ C EHGI GQ D + + + +F+E GK
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGQYVGDSPL--QLERIDVYFNEASGGK 58
Query: 253 QYP 261
P
Sbjct: 59 YVP 61
>At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin
(TUBG1) identical to SP|P38557 Tubulin gamma-1 chain
(Gamma-1 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 73.7 bits (173), Expect = 1e-13
Identities = 35/93 (37%), Positives = 56/93 (60%), Gaps = 2/93 (2%)
Frame = +3
Query: 255 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKED--AANNYARGHYTIGKEIVDLVL 428
+PRA+ +DLEP V++ ++ G YR L++ E + A NN+A G++ GK + + ++
Sbjct: 61 IPRALLIDLEPRVINGIQNGDYRNLYNHENIFVADHGGGAGNNWASGYHQ-GKGVEEEIM 119
Query: 429 DRIRKLADQCTGLQGFLIFHSFGGGTGLGSLPY 527
D I + AD L+GF++ HS GGTG G Y
Sbjct: 120 DMIDREADGSDSLEGFVLCHSIAGGTGSGMGSY 152
Score = 56.8 bits (131), Expect = 2e-08
Identities = 32/88 (36%), Positives = 50/88 (56%), Gaps = 3/88 (3%)
Frame = +2
Query: 509 SGFTSLLMERLSVDYGKKSKLEFAIYPAP-QVSTAVVEPYNSILTTHTTLEHSDCAFMVD 685
SG S L+E L+ Y KK ++++P + S VV+PYNS+LT ++DC ++D
Sbjct: 147 SGMGSYLLETLNDRYSKKLVQTYSVFPNQMETSDVVVQPYNSLLTLKRLTLNADCVVVLD 206
Query: 686 NEAIYDICRRNLDIERPTY--TN*IVSS 763
N A+ I L + PT+ TN +VS+
Sbjct: 207 NTALGRIAVERLHLTNPTFAQTNSLVST 234
Score = 47.6 bits (108), Expect = 9e-06
Identities = 25/52 (48%), Positives = 30/52 (57%)
Frame = +1
Query: 76 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFF 231
RE I++ VGQ G QIG W+ CLEHGI DG + T GG D + FF
Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGG--DRKDVFF 52
>At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin
(TUBG2) identical to SP|P38558 Tubulin gamma-2 chain
(Gamma-2 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 73.3 bits (172), Expect = 2e-13
Identities = 35/93 (37%), Positives = 56/93 (60%), Gaps = 2/93 (2%)
Frame = +3
Query: 255 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKED--AANNYARGHYTIGKEIVDLVL 428
+PRA+ +DLEP V++ ++ G YR L++ E + A NN+A G++ GK + + ++
Sbjct: 61 IPRALLIDLEPRVINGIQNGEYRNLYNHENIFLSDHGGGAGNNWASGYHQ-GKGVEEEIM 119
Query: 429 DRIRKLADQCTGLQGFLIFHSFGGGTGLGSLPY 527
D I + AD L+GF++ HS GGTG G Y
Sbjct: 120 DMIDREADGSDSLEGFVLCHSIAGGTGSGMGSY 152
Score = 57.2 bits (132), Expect = 1e-08
Identities = 32/88 (36%), Positives = 50/88 (56%), Gaps = 3/88 (3%)
Frame = +2
Query: 509 SGFTSLLMERLSVDYGKKSKLEFAIYPAP-QVSTAVVEPYNSILTTHTTLEHSDCAFMVD 685
SG S L+E L+ Y KK ++++P + S VV+PYNS+LT ++DC ++D
Sbjct: 147 SGMGSYLLETLNDRYSKKLVQTYSVFPNQMETSDVVVQPYNSLLTLKRLTLNADCVVVLD 206
Query: 686 NEAIYDICRRNLDIERPTY--TN*IVSS 763
N A+ I L + PT+ TN +VS+
Sbjct: 207 NTALNRIAVERLHLTNPTFAQTNSLVST 234
Score = 47.6 bits (108), Expect = 9e-06
Identities = 25/52 (48%), Positives = 30/52 (57%)
Frame = +1
Query: 76 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFF 231
RE I++ VGQ G QIG W+ CLEHGI DG + T GG D + FF
Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGG--DRKDVFF 52
>At4g38980.1 68417.m05523 expressed protein
Length = 280
Score = 31.9 bits (69), Expect = 0.49
Identities = 28/106 (26%), Positives = 48/106 (45%), Gaps = 10/106 (9%)
Frame = -2
Query: 494 EGVEDQESLQTGTLVSELADSVQNQIY--DFLS----NXXXXXXXXXGRIFLTSNKLFWM 333
E +E+ S+ G E SV +Q++ DF+S + + +TS ++F +
Sbjct: 156 ESIEEDGSVSNGEAKEEKPASVSSQVFKDDFMSTYVEDNAEDCNVTEDPVKVTSQEIFKV 215
Query: 332 KQLSVCASAD----LINNSRFKIDEDSTGYCLPAPVSLKKVLKESS 207
L V D L+ + +DE ST LP P++ +V+ E S
Sbjct: 216 WDLEVVGDNDEEDGLVLQLKKALDESSTVQPLPQPLNDDQVVSEKS 261
>At3g57510.1 68416.m06402 endo-polygalacturonase (ADPG1) identical
to endo-polygalacturonase [Arabidopsis thaliana]
GI:2597824
Length = 431
Score = 29.9 bits (64), Expect = 2.0
Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Frame = -3
Query: 727 NVEITA---ADVIDGFIVDHESTVRVLKGCVGGEDRVVGLDDGSGNLR 593
NVEITA + DG + + +RV +G D + ++DG+ NL+
Sbjct: 230 NVEITAPGDSPNTDGIHITNTQNIRVSNSDIGTGDDCISIEDGTQNLQ 277
>At1g80580.1 68414.m09453 ethylene-responsive element-binding family
protein contains AP2 DNA-binding domain; similar to
EREBP-3 (GI:1208496) [Nicotiana tabacum]
Length = 256
Score = 29.9 bits (64), Expect = 2.0
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = -2
Query: 776 GDNLSMRRFSWCRLGAQCRDYGGRCHRWL 690
G + +R+ W R A+ RD GRC WL
Sbjct: 114 GGFMGVRKRPWGRWSAEIRDRIGRCRHWL 142
>At1g24460.1 68414.m03081 myosin-related contains TIGRFAM TIGR01612:
reticulocyte binding protein; similar to Myosin heavy
chain, non-muscle (Zipper protein) (Myosin II)
(SP:Q99323) {Drosophila melanogaster} similar to EST
gb|T76116
Length = 1730
Score = 29.9 bits (64), Expect = 2.0
Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = -2
Query: 527 IRK*TQT-GTSTEGVEDQESLQTGTLVSELADSVQNQIYD 411
+R+ +T G TEGVED S LV D ++ QI D
Sbjct: 602 VRRLVETSGLMTEGVEDHTSSDINLLVDRSFDKIEKQIRD 641
>At5g09370.1 68418.m01085 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to lipid
transfer protein - Hordeum vulgare, EMBL:AF109195;
contains Pfam protease inhibitor/seed storage/LTP family
domain PF00234
Length = 158
Score = 29.1 bits (62), Expect = 3.5
Identities = 14/42 (33%), Positives = 17/42 (40%)
Frame = -2
Query: 242 PVSLKKVLKESSPPPMVLSVGIWPSGWMPCSRQ*SSQQALPI 117
PVS L +SPP +W SGW P +PI
Sbjct: 101 PVSACDSLPPASPPTANGQAPVWGSGWAPAPSPSKGNSLIPI 142
>At1g08250.1 68414.m00910 prephenate dehydratase family protein
contains similarity to prephenate dehydratase GI:1008717
from [Amycolatopsis methanolica]
Length = 413
Score = 29.1 bits (62), Expect = 3.5
Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
Frame = -1
Query: 264 HGVLLASSGLAEESVERIVSTPDGLV-CGHLAIR--LDAVLQAVKLPAGITD 118
H LLA G+ +E + R++S P GL C H + L+ +AV AG +
Sbjct: 197 HHCLLALPGVRKEFLTRVISHPQGLAQCEHTLTKLGLNVAREAVDDTAGAAE 248
>At5g11040.1 68418.m01290 expressed protein weak similarity to
hypercellular protein [Aspergillus nidulans] GI:9309269
Length = 1186
Score = 28.3 bits (60), Expect = 6.0
Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Frame = +2
Query: 119 SVMPAGS-FTAWSTASSLMA-RCPQTRPSGVETILSTLSSARPELASSTPC 265
S + AG AWS A+ L+ P PSG + ++L+++ L S T C
Sbjct: 458 SAVRAGDPLAAWSAAARLLRWHYPLITPSGQNGLANSLANSADRLPSGTRC 508
>At4g24560.1 68417.m03520 ubiquitin-specific protease 16, putative
(UBP16) similar to ubiquitin-specific protease 16
GI:11993477 [Arabidopsis thaliana]
Length = 1008
Score = 28.3 bits (60), Expect = 6.0
Identities = 13/35 (37%), Positives = 23/35 (65%)
Frame = +2
Query: 158 ASSLMARCPQTRPSGVETILSTLSSARPELASSTP 262
AS+ +R P + + TI ++S++ PEL+S+TP
Sbjct: 862 ASNKKSRVPLPKANEKSTISRSVSTSSPELSSNTP 896
>At2g31690.1 68415.m03868 lipase class 3 family protein similar to
DEFECTIVE IN ANTHER DEHISCENCE1 [Arabidopsis thaliana]
GI:16215706; contains Pfam profile PF01764: Lipase
Length = 484
Score = 27.9 bits (59), Expect = 8.0
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = -2
Query: 296 NNSRFKIDEDSTGYCLPAPVSLKKVLKESSPPPM 195
N R K S+ L APV L + SSPPP+
Sbjct: 38 NPKRLKTANSSSSSSLLAPVILNSPVASSSPPPI 71
>At1g61140.1 68414.m06888 SNF2 domain-containing protein / helicase
domain-containing protein / zinc finger protein-related
similar to ATPase [Homo sapiens] GI:531196; contains
Pfam profiles PF00271: Helicase conserved C-terminal
domain, PF00176: SNF2 family N-terminal domain, PF00097:
Zinc finger, C3HC4 type (RING finger)
Length = 1287
Score = 27.9 bits (59), Expect = 8.0
Identities = 19/74 (25%), Positives = 33/74 (44%), Gaps = 6/74 (8%)
Frame = +2
Query: 545 VDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSD------CAFMVDNEAIYDI 706
+D+ + F P VS A V+PYNS +H D C+F DN+ ++
Sbjct: 285 IDFSSARGISFKFESNPSVSPACVKPYNS-FDSHLADSDLDRPNNYSCSFQ-DNKTVHVK 342
Query: 707 CRRNLDIERPTYTN 748
+ + E+ Y++
Sbjct: 343 VKPEAESEKVVYSS 356
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,845,381
Number of Sequences: 28952
Number of extensions: 411169
Number of successful extensions: 1441
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 1327
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1436
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1746037600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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