Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20376
         (553 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF487533-1|AAL93294.1|  531|Anopheles gambiae cytochrome P450 CY...    27   0.41 
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         27   0.54 
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    26   0.95 
AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcript...    25   1.7  
AF063021-3|AAC16247.1|  484|Anopheles gambiae dopa decarboxylase...    25   2.2  
AF063021-2|AAC16249.1|  515|Anopheles gambiae dopa decarboxylase...    25   2.2  
AY745233-1|AAU93512.1|  100|Anopheles gambiae SOD3B protein.           23   5.0  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    23   5.0  
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    23   6.7  
AY748839-1|AAV28187.1|  169|Anopheles gambiae cytochrome P450 pr...    23   8.8  

>AF487533-1|AAL93294.1|  531|Anopheles gambiae cytochrome P450
           CYP9K1 protein.
          Length = 531

 Score = 27.1 bits (57), Expect = 0.41
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = -1

Query: 517 DKLGASA*IAAVFSVGMGPRSSIGSPITLM 428
           +  GA    +A+ + G+GPR+ IGS   LM
Sbjct: 454 ESAGAPVDSSAMLAFGLGPRNCIGSRFALM 483


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 26.6 bits (56), Expect = 0.54
 Identities = 12/26 (46%), Positives = 12/26 (46%)
 Frame = +2

Query: 323 DHCHGRY*RLSPWATCTRLWLTHSYP 400
           D CH  Y R   W  C R  LTH  P
Sbjct: 153 DECHKNYGRQELWEICAR--LTHQAP 176


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 25.8 bits (54), Expect = 0.95
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = -3

Query: 104 SERDFSATDLTAKMPLPTRLIAPNIFRNQLLSS 6
           +ER  S T+ T   P+PT L  PN+F    +SS
Sbjct: 40  AERSISGTESTK--PVPTVLGGPNLFAPSAVSS 70



 Score = 23.8 bits (49), Expect = 3.8
 Identities = 12/30 (40%), Positives = 15/30 (50%), Gaps = 1/30 (3%)
 Frame = -1

Query: 424 RPRVSAPTGIRMGEPESSTGCPRT-KPSVP 338
           RP    P G +M  P  + G PRT  P+ P
Sbjct: 180 RPNPGMPPGPQMMRPPGNVGPPRTGTPTQP 209


>AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcriptase
           protein.
          Length = 973

 Score = 25.0 bits (52), Expect = 1.7
 Identities = 9/14 (64%), Positives = 11/14 (78%)
 Frame = +3

Query: 21  ISENVGGNKSSWKR 62
           I  N+GG KSSW+R
Sbjct: 739 IMPNIGGPKSSWRR 752


>AF063021-3|AAC16247.1|  484|Anopheles gambiae dopa decarboxylase
           isoform 2 protein.
          Length = 484

 Score = 24.6 bits (51), Expect = 2.2
 Identities = 11/39 (28%), Positives = 19/39 (48%)
 Frame = +3

Query: 414 TLGRIINVIGEPIDERGPIPTEKTAAIHAEAPSLSTCLC 530
           TLG       + +DE GP+  +    +H +A + S  +C
Sbjct: 249 TLGTTNTCAFDRLDEIGPVANQYNVWVHVDAYAGSAFIC 287


>AF063021-2|AAC16249.1|  515|Anopheles gambiae dopa decarboxylase
           isoform 1 protein.
          Length = 515

 Score = 24.6 bits (51), Expect = 2.2
 Identities = 11/39 (28%), Positives = 19/39 (48%)
 Frame = +3

Query: 414 TLGRIINVIGEPIDERGPIPTEKTAAIHAEAPSLSTCLC 530
           TLG       + +DE GP+  +    +H +A + S  +C
Sbjct: 280 TLGTTNTCAFDRLDEIGPVANQYNVWVHVDAYAGSAFIC 318


>AY745233-1|AAU93512.1|  100|Anopheles gambiae SOD3B protein.
          Length = 100

 Score = 23.4 bits (48), Expect = 5.0
 Identities = 10/31 (32%), Positives = 15/31 (48%)
 Frame = -3

Query: 347 FSTVHGNGPNCVLTQMLGYLKYEAGRSILHL 255
           +S   GN  NC+   ++G  + E     LHL
Sbjct: 70  YSKTTGNSGNCIACAIIGVAREEYFAERLHL 100


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 23.4 bits (48), Expect = 5.0
 Identities = 11/32 (34%), Positives = 15/32 (46%)
 Frame = -1

Query: 421 PRVSAPTGIRMGEPESSTGCPRTKPSVPSMAM 326
           P +SAP G+ M       G P   P  PS+ +
Sbjct: 558 PGLSAPLGLGMRPQGGPLGLPSHHPLHPSLGL 589


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 23.0 bits (47), Expect = 6.7
 Identities = 10/25 (40%), Positives = 17/25 (68%)
 Frame = -3

Query: 539 SPAAQTCRQTRSFSMNSSSLLGGDG 465
           +PA+ +   + S S +S+SL GG+G
Sbjct: 791 TPASLSSSSSSSSSASSTSLCGGNG 815


>AY748839-1|AAV28187.1|  169|Anopheles gambiae cytochrome P450
           protein.
          Length = 169

 Score = 22.6 bits (46), Expect = 8.8
 Identities = 15/52 (28%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
 Frame = +1

Query: 235 PPILNALRCKIDLPASYLR*PNIWVRTQFGPLPWTVLKA*SVGNLY-STLAH 387
           PP++  ++ +ID    + R P +  RTQ      T+ +A  +  L  S +AH
Sbjct: 23  PPVIERMQREIDEVVGHGRLPTLDDRTQLAYTEATLREAMRIDTLVPSGIAH 74


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 601,275
Number of Sequences: 2352
Number of extensions: 12184
Number of successful extensions: 27
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 51301854
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)