Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20372
(700 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_03_0183 + 13543833-13544051,13544161-13544257,13545616-135457... 85 7e-17
01_01_1062 + 8381281-8381490,8382353-8382449,8382546-8382637,838... 85 7e-17
05_01_0405 - 3191639-3192059,3192107-3192234,3192312-3192440,319... 83 3e-16
07_03_1748 - 29195037-29195427,29195552-29195679,29195810-291959... 57 1e-08
01_01_0402 + 3046504-3046582,3047265-3047487,3047954-3048107,304... 49 4e-06
07_03_1086 + 23858419-23859423,23859527-23859610 33 0.16
03_04_0180 + 18173005-18173976,18174066-18174170 33 0.29
06_03_1344 - 29472139-29473292,29474478-29475386,29475504-294756... 31 0.67
07_03_0424 - 18060133-18061581 31 0.88
01_06_0893 - 32766994-32768841,32769596-32769782,32769860-327699... 31 0.88
07_03_0889 - 22316945-22317062,22317149-22318794 31 1.2
07_03_0429 + 18103724-18105196 29 3.5
07_03_0425 - 18070607-18070712,18071771-18072744 29 3.5
02_01_0520 + 3761051-3761107,3761420-3761822,3761960-3762129 29 3.5
01_01_0768 - 5935319-5935417,5935536-5935583,5935721-5935780,593... 29 3.5
04_03_0053 - 10286076-10286516,10286560-10287586,10287756-102880... 29 4.7
03_05_0211 - 22020515-22020687,22020801-22020831,22022060-220221... 29 4.7
02_05_1265 - 35326506-35326773,35326944-35327109,35327194-353273... 28 6.2
12_02_1280 - 27517683-27517871,27517955-27518029,27518155-275183... 28 8.2
07_01_0180 + 1266975-1267550 28 8.2
02_03_0380 + 18335903-18337837 28 8.2
>01_03_0183 +
13543833-13544051,13544161-13544257,13545616-13545707,
13545928-13546047,13546170-13546355,13546439-13546602,
13546691-13546769,13548256-13548387,13548560-13548687,
13548785-13549140,13549211-13549221,13549312-13549431,
13549510-13549637,13552210-13552260,13553105-13553189,
13553856-13553954,13555260-13555535
Length = 780
Score = 84.6 bits (200), Expect = 7e-17
Identities = 39/66 (59%), Positives = 50/66 (75%)
Frame = +1
Query: 502 QKMLSCDKNPPIDELIAAGILPILVQCLSRADNPALQFETAWALTNIASGTSAQTNKVVH 681
+K+LS D PPIDE+I +G+LP V+ L+R + P LQFE AWALTNIASGT+A T V+
Sbjct: 100 RKLLSVDHCPPIDEVIRSGVLPRFVEFLTREEYPQLQFEAAWALTNIASGTAANTMAVIE 159
Query: 682 AGAVPV 699
GAVP+
Sbjct: 160 HGAVPI 165
Score = 35.1 bits (77), Expect = 0.054
Identities = 17/42 (40%), Positives = 25/42 (59%)
Frame = +2
Query: 272 AGKDVDEMRRRRNEVTVELRKNKREETLQKRRNVPISYSTDE 397
A D E RRRR ++TV LRK R+ L+++R P + + E
Sbjct: 18 ASMDAAEGRRRREDITVILRKADRDRALKEKRRRPTATAAAE 59
Score = 31.1 bits (67), Expect = 0.88
Identities = 12/44 (27%), Positives = 22/44 (50%)
Frame = +1
Query: 562 LPILVQCLSRADNPALQFETAWALTNIASGTSAQTNKVVHAGAV 693
LP L L+ +++ E W ++NI +GT Q V+ + +
Sbjct: 328 LPCLFNLLTTTQKKSVKREACWTISNITAGTKEQIQAVIDSNII 371
>01_01_1062 +
8381281-8381490,8382353-8382449,8382546-8382637,
8382729-8382860,8382975-8383160,8383244-8383407,
8383514-8383592,8384484-8384612,8385102-8385229,
8385348-8385711
Length = 526
Score = 84.6 bits (200), Expect = 7e-17
Identities = 38/66 (57%), Positives = 51/66 (77%)
Frame = +1
Query: 502 QKMLSCDKNPPIDELIAAGILPILVQCLSRADNPALQFETAWALTNIASGTSAQTNKVVH 681
+K+LS +++PPI+E+I +G++P VQ L+R D P LQFE AWALTNIASGTS T V+
Sbjct: 97 RKLLSIERSPPIEEVIQSGVVPRFVQFLTREDFPQLQFEAAWALTNIASGTSENTKVVID 156
Query: 682 AGAVPV 699
GAVP+
Sbjct: 157 HGAVPI 162
Score = 38.3 bits (85), Expect = 0.006
Identities = 31/84 (36%), Positives = 45/84 (53%), Gaps = 8/84 (9%)
Frame = +2
Query: 281 DVDEMRRRRNEVTVELRKNKREETLQKRRN--------VPISYSTDEEEIDKNLATTDLD 436
D +E RRRR + VE+RK++REE+L K+R VP S +T +DK L + L
Sbjct: 21 DAEEGRRRREDNMVEIRKSRREESLLKKRREGLQAQAPVPASAATG---VDKKLES--LP 75
Query: 437 ELVMNAANAENPEAQLAAVQQCRK 508
++ + +N QL A Q RK
Sbjct: 76 AMIGGVYSDDN-NLQLEATTQFRK 98
Score = 32.7 bits (71), Expect = 0.29
Identities = 20/62 (32%), Positives = 31/62 (50%)
Frame = +1
Query: 511 LSCDKNPPIDELIAAGILPILVQCLSRADNPALQFETAWALTNIASGTSAQTNKVVHAGA 690
LS N I +I AG+ P LV+ L +P++ + NI +G AQT ++ A
Sbjct: 269 LSDGTNDKIQAVIEAGVCPRLVELLLHP-SPSVLIPALRTVGNIVTGDDAQTQCIIDHQA 327
Query: 691 VP 696
+P
Sbjct: 328 LP 329
Score = 29.9 bits (64), Expect = 2.0
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = +1
Query: 562 LPILVQCLSRADNPALQFETAWALTNIASGTSAQTNKVVHAGAVP 696
LP L + + D L + WAL+ ++ GT+ + V+ AG P
Sbjct: 244 LPALARLIHSNDEEVLT-DACWALSYLSDGTNDKIQAVIEAGVCP 287
>05_01_0405 -
3191639-3192059,3192107-3192234,3192312-3192440,
3193538-3193616,3193716-3193879,3193968-3194153,
3194258-3194389,3194484-3194575,3195054-3195150,
3195258-3195485
Length = 551
Score = 82.6 bits (195), Expect = 3e-16
Identities = 37/66 (56%), Positives = 49/66 (74%)
Frame = +1
Query: 502 QKMLSCDKNPPIDELIAAGILPILVQCLSRADNPALQFETAWALTNIASGTSAQTNKVVH 681
+K+LS +++PPI+E+I G++P + L R D P LQFE AWALTNIASGTS T VV
Sbjct: 103 RKLLSIERSPPIEEVINTGVVPRFIAFLQREDYPQLQFEAAWALTNIASGTSDNTKVVVE 162
Query: 682 AGAVPV 699
+GAVP+
Sbjct: 163 SGAVPI 168
Score = 38.7 bits (86), Expect = 0.004
Identities = 17/29 (58%), Positives = 23/29 (79%)
Frame = +2
Query: 281 DVDEMRRRRNEVTVELRKNKREETLQKRR 367
D DE RRRR + VE+RK++REE+L K+R
Sbjct: 21 DADEGRRRREDNMVEIRKSRREESLLKKR 49
>07_03_1748 -
29195037-29195427,29195552-29195679,29195810-29195938,
29196334-29196412,29196508-29196671,29196754-29196936,
29197021-29197146,29197237-29197328,29197412-29197508,
29198013-29198339
Length = 571
Score = 57.2 bits (132), Expect = 1e-08
Identities = 33/70 (47%), Positives = 44/70 (62%), Gaps = 2/70 (2%)
Frame = +1
Query: 493 ATMQ--KMLSCDKNPPIDELIAAGILPILVQCLSRADNPALQFETAWALTNIASGTSAQT 666
AT+Q ++LS +KNP + ++I A +LP LSR ++P LQ E AW LTNIA+ S T
Sbjct: 131 ATIQFRRLLSDEKNPTVIKIIRADVLPRFSDFLSRHEHPQLQMEAAWVLTNIAA--SDYT 188
Query: 667 NKVVHAGAVP 696
V GAVP
Sbjct: 189 LLVAECGAVP 198
Score = 28.3 bits (60), Expect = 6.2
Identities = 17/46 (36%), Positives = 24/46 (52%)
Frame = +1
Query: 556 GILPILVQCLSRADNPALQFETAWALTNIASGTSAQTNKVVHAGAV 693
G +P LV+ L A N ++ + WAL NIA+ V+ GAV
Sbjct: 195 GAVPRLVELLESA-NANIRHQAIWALGNIAADVPTCREIVLDHGAV 239
Score = 28.3 bits (60), Expect = 6.2
Identities = 17/46 (36%), Positives = 21/46 (45%)
Frame = +1
Query: 559 ILPILVQCLSRADNPALQFETAWALTNIASGTSAQTNKVVHAGAVP 696
IL I+ Q + D L + WAL I G S V+ AGA P
Sbjct: 279 ILDIISQLIHSVDEKILG-DACWALCYICDGVSDGIQHVLDAGACP 323
Score = 27.9 bits (59), Expect = 8.2
Identities = 16/43 (37%), Positives = 24/43 (55%)
Frame = +2
Query: 239 SSEKPLHVFKNAGKDVDEMRRRRNEVTVELRKNKREETLQKRR 367
S + L +K G DV RRRR + + +R++ R+ L KRR
Sbjct: 10 SEDARLAAYK-PGVDVARSRRRREDRLLAVRRSNRDAGLFKRR 51
>01_01_0402 +
3046504-3046582,3047265-3047487,3047954-3048107,
3048253-3048355,3048554-3048738,3048972-3049051,
3049433-3049511,3050015-3050096,3050221-3050279,
3050379-3050684,3050825-3050989
Length = 504
Score = 48.8 bits (111), Expect = 4e-06
Identities = 24/62 (38%), Positives = 37/62 (59%)
Frame = +1
Query: 499 MQKMLSCDKNPPIDELIAAGILPILVQCLSRADNPALQFETAWALTNIASGTSAQTNKVV 678
++++LS + P +D I AG +P+LVQ LS + E AW LTNIA+G +T ++
Sbjct: 116 LRRLLSQPEVPLVDTAIKAGAVPLLVQYLSFGSSDEQLLEAAWCLTNIAAGEPEETKSLL 175
Query: 679 HA 684
A
Sbjct: 176 PA 177
Score = 37.1 bits (82), Expect = 0.013
Identities = 17/43 (39%), Positives = 29/43 (67%)
Frame = +1
Query: 571 LVQCLSRADNPALQFETAWALTNIASGTSAQTNKVVHAGAVPV 699
L++CL ++DN L+ E++WAL+NIA+G+ + + A PV
Sbjct: 335 LIKCL-KSDNRVLRKESSWALSNIAAGSFEHKKLIFASEATPV 376
>07_03_1086 + 23858419-23859423,23859527-23859610
Length = 362
Score = 33.5 bits (73), Expect = 0.16
Identities = 19/61 (31%), Positives = 31/61 (50%)
Frame = +1
Query: 517 CDKNPPIDELIAAGILPILVQCLSRADNPALQFETAWALTNIASGTSAQTNKVVHAGAVP 696
CD+N I ++ AG + LV L A +PA + A AL ++ + + AGA+P
Sbjct: 135 CDENKAI--IVEAGAIRPLVHALKSAASPAARENAACALLRLSQLDGSAAASIGRAGAIP 192
Query: 697 V 699
+
Sbjct: 193 L 193
>03_04_0180 + 18173005-18173976,18174066-18174170
Length = 358
Score = 32.7 bits (71), Expect = 0.29
Identities = 24/50 (48%), Positives = 27/50 (54%)
Frame = +1
Query: 544 LIAAGILPILVQCLSRADNPALQFETAWALTNIASGTSAQTNKVVHAGAV 693
++AAG LP LV LSR D P LQ AL N+ S VV AGAV
Sbjct: 89 IVAAGALPPLVALLSRPD-PLLQEHGVTALLNL-SLREDNRGAVVDAGAV 136
Score = 28.7 bits (61), Expect = 4.7
Identities = 17/52 (32%), Positives = 26/52 (50%)
Frame = +1
Query: 544 LIAAGILPILVQCLSRADNPALQFETAWALTNIASGTSAQTNKVVHAGAVPV 699
++ AG + LV+ L A +PA + A L +A + + AGAVPV
Sbjct: 130 VVDAGAVGPLVRALRSAASPAARENAACTLLRLAQLDGSAAAAIGRAGAVPV 181
>06_03_1344 -
29472139-29473292,29474478-29475386,29475504-29475618,
29476017-29476218,29477177-29477296,29477431-29477582,
29478177-29478461
Length = 978
Score = 31.5 bits (68), Expect = 0.67
Identities = 12/34 (35%), Positives = 24/34 (70%)
Frame = +2
Query: 308 NEVTVELRKNKREETLQKRRNVPISYSTDEEEID 409
+EV ++ RK+ + E +K+R+V SYS+ + E++
Sbjct: 418 SEVDIDTRKHPKREHRKKKRDVTESYSSSDSEVE 451
Score = 27.9 bits (59), Expect = 8.2
Identities = 15/57 (26%), Positives = 32/57 (56%)
Frame = +2
Query: 239 SSEKPLHVFKNAGKDVDEMRRRRNEVTVELRKNKREETLQKRRNVPISYSTDEEEID 409
S +K H K+ + + + + EV + R++++ E +K+RN+ S S+ + E+D
Sbjct: 368 SKQKSKHKKKHLPESLSDSKV---EVGRDTRRHQKREHRKKKRNITESESSSDSEVD 421
>07_03_0424 - 18060133-18061581
Length = 482
Score = 31.1 bits (67), Expect = 0.88
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = +1
Query: 529 PPIDELIAAGILPILVQCLSRADNPALQFETAWALTNIA 645
PP+ ++A G+LP V PAL F TA A + +A
Sbjct: 113 PPVTCVVADGLLPFAVDVAEELGVPALSFRTASACSFLA 151
>01_06_0893 -
32766994-32768841,32769596-32769782,32769860-32769987,
32770080-32770283,32770373-32770523,32771424-32771533,
32772534-32772903,32773031-32773189,32773719-32773848,
32773921-32773989,32774066-32774154,32774319-32774439,
32775878-32776148
Length = 1278
Score = 31.1 bits (67), Expect = 0.88
Identities = 14/51 (27%), Positives = 26/51 (50%)
Frame = +2
Query: 287 DEMRRRRNEVTVELRKNKREETLQKRRNVPISYSTDEEEIDKNLATTDLDE 439
+EM+ +R T + ++ K+++ QK+ N + EE+ D N DE
Sbjct: 470 NEMKGKRGSTTEKDKRAKKKQAKQKKNNRKVKDKDREEKCDSNFPERSQDE 520
>07_03_0889 - 22316945-22317062,22317149-22318794
Length = 587
Score = 30.7 bits (66), Expect = 1.2
Identities = 18/47 (38%), Positives = 23/47 (48%)
Frame = +1
Query: 553 AGILPILVQCLSRADNPALQFETAWALTNIASGTSAQTNKVVHAGAV 693
AG P+LV A + A Q + L IASG S+ V+ GAV
Sbjct: 328 AGAAPVLVSLCRGAADEAAQIQAMELLAAIASGDSSVREAVLQEGAV 374
>07_03_0429 + 18103724-18105196
Length = 490
Score = 29.1 bits (62), Expect = 3.5
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +1
Query: 529 PPIDELIAAGILPILVQCLSRADNPALQFETAWALTNIA 645
PP+ ++A +LP + PAL F TA A + +A
Sbjct: 120 PPVTTVVADALLPFAIDVAEELGVPALAFRTASACSFLA 158
>07_03_0425 - 18070607-18070712,18071771-18072744
Length = 359
Score = 29.1 bits (62), Expect = 3.5
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = +1
Query: 529 PPIDELIAAGILPILVQCLSRADNPALQFETAWALTNIA 645
PP+ ++A GI+P+ + PAL F T A + +A
Sbjct: 121 PPVTCVVADGIMPLAIDIAEEIGVPALGFRTVSACSFLA 159
>02_01_0520 + 3761051-3761107,3761420-3761822,3761960-3762129
Length = 209
Score = 29.1 bits (62), Expect = 3.5
Identities = 14/50 (28%), Positives = 27/50 (54%), Gaps = 4/50 (8%)
Frame = +2
Query: 266 KNAGKDVDEMRRRRNE----VTVELRKNKREETLQKRRNVPISYSTDEEE 403
KN GK+ +E + R+ +ELR + E+ ++ + P++ + EEE
Sbjct: 4 KNQGKEEEEKQYRKERDVLWTRIELRDREEEKNTGRQEHAPLNLTAREEE 53
>01_01_0768 -
5935319-5935417,5935536-5935583,5935721-5935780,
5935884-5935996,5936082-5936154,5936895-5936939,
5937020-5937133,5937227-5937253,5937963-5938247
Length = 287
Score = 29.1 bits (62), Expect = 3.5
Identities = 21/82 (25%), Positives = 35/82 (42%)
Frame = +2
Query: 266 KNAGKDVDEMRRRRNEVTVELRKNKREETLQKRRNVPISYSTDEEEIDKNLATTDLDELV 445
K +G D + RR + LR+N ++R N ++ E+ I + + +D+D V
Sbjct: 84 KESGADAYQQRRDLTDDDQLLRRNGYLSQGRRRMNERARHADREDSIRRTVYVSDIDHTV 143
Query: 446 MNAANAENPEAQLAAVQQCRKC 511
A+ A V CR C
Sbjct: 144 TEERLAD-IFANCGQVVDCRIC 164
>04_03_0053 -
10286076-10286516,10286560-10287586,10287756-10288096,
10288198-10288248
Length = 619
Score = 28.7 bits (61), Expect = 4.7
Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = -1
Query: 589 SKGTELGWGVFQQL*AHQ*AGFYHTRAFSALLHSSQLCFRVF-CV 458
+K + WG ++Q HQ A Y T F ++ LCF F C+
Sbjct: 428 NKSFDTWWGEWKQHIFHQSASMYMTDLFPNVVPQGHLCFANFVCI 472
>03_05_0211 -
22020515-22020687,22020801-22020831,22022060-22022169,
22022715-22023102,22023344-22023397,22023739-22023849,
22023956-22024015,22024618-22024694,22026155-22026188,
22026267-22027235
Length = 668
Score = 28.7 bits (61), Expect = 4.7
Identities = 17/60 (28%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
Frame = +2
Query: 269 NAGKDVDEMRRRRNEVTVELRKNKREE---TLQKRRNVPISYSTDEEEIDKNLATTDLDE 439
N K + +R+R K ++ T K+RN + Y TDE+E D + +D +E
Sbjct: 414 NIRKGSNSRKRKRGSTPKSSSKKFDDDDDITPSKKRNKALEYDTDEDEDDADPMKSDSEE 473
>02_05_1265 -
35326506-35326773,35326944-35327109,35327194-35327351,
35327779-35327966,35328046-35328156,35328311-35328476,
35328718-35328885,35329374-35330623
Length = 824
Score = 28.3 bits (60), Expect = 6.2
Identities = 24/83 (28%), Positives = 40/83 (48%)
Frame = +2
Query: 308 NEVTVELRKNKREETLQKRRNVPISYSTDEEEIDKNLATTDLDELVMNAANAENPEAQLA 487
N ELR ++R + + + STD+ EID+N DLD +N + P + A
Sbjct: 573 NMFCTELRIHRRFDL----KGSSLGRSTDKIEIDENTTLKDLD---LNYSFYLEPSWREA 625
Query: 488 AVQQCRKCSRVIKTRLLMSS*LL 556
++Q S ++T+ +M LL
Sbjct: 626 LLKQIETDSEFLRTQRIMDYSLL 648
>12_02_1280 -
27517683-27517871,27517955-27518029,27518155-27518318,
27518424-27518538,27518783-27519074,27519162-27519318,
27519438-27519510,27520309-27520377,27520471-27520694,
27520800-27520981,27521067-27522064,27522335-27522580
Length = 927
Score = 27.9 bits (59), Expect = 8.2
Identities = 14/43 (32%), Positives = 25/43 (58%)
Frame = +2
Query: 287 DEMRRRRNEVTVELRKNKREETLQKRRNVPISYSTDEEEIDKN 415
+E RRR+ + + R ++ LQK++ + S DEEE++ N
Sbjct: 443 EEARRRKEAIMAKYR----QQQLQKQQLESLPRSNDEEEVEMN 481
>07_01_0180 + 1266975-1267550
Length = 191
Score = 27.9 bits (59), Expect = 8.2
Identities = 17/70 (24%), Positives = 31/70 (44%), Gaps = 1/70 (1%)
Frame = +2
Query: 275 GKDVDEMRRRRNEVTVELRKNKREETLQKRRNV-PISYSTDEEEIDKNLATTDLDELVMN 451
G+D +E RRRR + R++ R ++R+ V + + DE ++ + LD
Sbjct: 67 GEDGEEERRRRLRRKISNRESARRSRARRRQRVEELERAADELRAERRALASRLDATARR 126
Query: 452 AANAENPEAQ 481
A A+
Sbjct: 127 ALAVRGANAR 136
>02_03_0380 + 18335903-18337837
Length = 644
Score = 27.9 bits (59), Expect = 8.2
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = +2
Query: 356 QKRRNVPISYSTDEEEIDKNLATTDLDELVMNAA 457
Q++R P+ Y T EEI A LDEL A
Sbjct: 420 QQKREFPLGYKTFGEEIPPQYAIQVLDELTKGEA 453
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,136,997
Number of Sequences: 37544
Number of extensions: 405150
Number of successful extensions: 1073
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1030
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1070
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1792053856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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