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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20372
         (700 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_52425| Best HMM Match : Arm (HMM E-Value=9.7e-28)                   66   2e-11
SB_20122| Best HMM Match : Arm (HMM E-Value=1.2e-24)                   61   1e-09
SB_2550| Best HMM Match : No HMM Matches (HMM E-Value=.)               60   1e-09
SB_29650| Best HMM Match : Arm (HMM E-Value=7.30076e-43)               52   3e-07
SB_35833| Best HMM Match : No HMM Matches (HMM E-Value=.)              52   4e-07
SB_22229| Best HMM Match : Arm (HMM E-Value=0)                         36   0.024
SB_53106| Best HMM Match : PLAT (HMM E-Value=0)                        36   0.032
SB_19563| Best HMM Match : No HMM Matches (HMM E-Value=.)              33   0.17 
SB_3360| Best HMM Match : No HMM Matches (HMM E-Value=.)               33   0.22 
SB_47670| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   1.6  
SB_17370| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   2.7  
SB_5831| Best HMM Match : TolA (HMM E-Value=0.0037)                    29   2.7  
SB_40582| Best HMM Match : Kazal_1 (HMM E-Value=0)                     29   2.7  
SB_11650| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   3.6  
SB_22495| Best HMM Match : DUF116 (HMM E-Value=8.1)                    29   4.8  
SB_21701| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   4.8  
SB_52978| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   4.8  
SB_38184| Best HMM Match : HisKA_2 (HMM E-Value=8.6)                   29   4.8  
SB_45305| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   6.3  
SB_47985| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   6.3  
SB_46871| Best HMM Match : PAN (HMM E-Value=1)                         28   6.3  
SB_27445| Best HMM Match : DUF227 (HMM E-Value=9.9)                    28   6.3  
SB_48321| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   8.4  
SB_19076| Best HMM Match : HECT (HMM E-Value=0)                        28   8.4  
SB_5618| Best HMM Match : No HMM Matches (HMM E-Value=.)               28   8.4  
SB_51335| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   8.4  
SB_30637| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   8.4  
SB_24364| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   8.4  

>SB_52425| Best HMM Match : Arm (HMM E-Value=9.7e-28)
          Length = 234

 Score = 66.5 bits (155), Expect = 2e-11
 Identities = 39/72 (54%), Positives = 45/72 (62%)
 Frame = +1

Query: 481 VGCCATMQKMLSCDKNPPIDELIAAGILPILVQCLSRADNPALQFETAWALTNIASGTSA 660
           +G     +K+LS DKNPPID+LI                N +LQFE AWALTNIASGTS 
Sbjct: 46  LGAVQAARKLLSKDKNPPIDDLI----------------NHSLQFEAAWALTNIASGTSE 89

Query: 661 QTNKVVHAGAVP 696
           QT  VV+AGAVP
Sbjct: 90  QTQAVVNAGAVP 101



 Score = 46.0 bits (104), Expect = 3e-05
 Identities = 25/57 (43%), Positives = 35/57 (61%)
 Frame = +2

Query: 338 KREETLQKRRNVPISYSTDEEEIDKNLATTDLDELVMNAANAENPEAQLAAVQQCRK 508
           KRE+ +QKRRNVP+      +E D+     DL+ +VM  A +++P  QL AVQ  RK
Sbjct: 2   KREDCMQKRRNVPLEL---PDEKDEKFQRRDLNAIVME-AGSDDPSVQLGAVQAARK 54


>SB_20122| Best HMM Match : Arm (HMM E-Value=1.2e-24)
          Length = 163

 Score = 60.9 bits (141), Expect = 1e-09
 Identities = 35/68 (51%), Positives = 43/68 (63%)
 Frame = +1

Query: 496 TMQKMLSCDKNPPIDELIAAGILPILVQCLSRADNPALQFETAWALTNIASGTSAQTNKV 675
           +++KMLS +K+PPID++I                NP LQFE AWALTNIASGTS QT  V
Sbjct: 16  SVRKMLSKEKSPPIDDVI----------------NPLLQFEAAWALTNIASGTSEQTKAV 59

Query: 676 VHAGAVPV 699
              GAVP+
Sbjct: 60  QEGGAVPM 67



 Score = 29.5 bits (63), Expect = 2.7
 Identities = 19/47 (40%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
 Frame = +1

Query: 556 GILPILVQCLSRA-DNPALQFETAWALTNIASGTSAQTNKVVHAGAV 693
           G +P+ V+ LS   DN A Q    WAL NIA       N V+  GA+
Sbjct: 63  GAVPMFVKLLSSVHDNVAEQ--AVWALGNIAGDGPLMRNTVIACGAL 107


>SB_2550| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 929

 Score = 60.5 bits (140), Expect = 1e-09
 Identities = 37/91 (40%), Positives = 54/91 (59%), Gaps = 6/91 (6%)
 Frame = +2

Query: 254 LHVFKNAGKDVDEMRRRRNEVTVELRKNKREETLQKRRNVPISYSTDEEEIDKNLATTD- 430
           +  +KN   DV EMRRRR E  V+LRK KREE + KRRNV ++ ++      + L T+D 
Sbjct: 690 IKAYKNKSLDVSEMRRRREEEGVQLRKAKREEQMFKRRNVEVTRTSSTGSELEELLTSDY 749

Query: 431 -----LDELVMNAANAENPEAQLAAVQQCRK 508
                L + ++ A  +++ E QLAA Q+ RK
Sbjct: 750 MAEGPLFQDMVQAIISDDVEMQLAATQRFRK 780



 Score = 44.4 bits (100), Expect = 9e-05
 Identities = 19/37 (51%), Positives = 27/37 (72%)
 Frame = +1

Query: 502 QKMLSCDKNPPIDELIAAGILPILVQCLSRADNPALQ 612
           +K+LS + NPPID++I  G++P  V+ L R DN ALQ
Sbjct: 779 RKILSKEPNPPIDDVIKCGVIPKFVEFLQREDNSALQ 815


>SB_29650| Best HMM Match : Arm (HMM E-Value=7.30076e-43)
          Length = 215

 Score = 52.4 bits (120), Expect = 3e-07
 Identities = 24/34 (70%), Positives = 26/34 (76%)
 Frame = +1

Query: 598 NPALQFETAWALTNIASGTSAQTNKVVHAGAVPV 699
           +P LQFE AWALTNIASGTS QT  V   GAVP+
Sbjct: 18  HPLLQFEAAWALTNIASGTSEQTKAVQEGGAVPM 51



 Score = 37.9 bits (84), Expect = 0.008
 Identities = 18/59 (30%), Positives = 30/59 (50%)
 Frame = +1

Query: 520 DKNPPIDELIAAGILPILVQCLSRADNPALQFETAWALTNIASGTSAQTNKVVHAGAVP 696
           +KNPP D      +LP + + +   D   L  +T WAL+ +  G + +   V+ +G VP
Sbjct: 120 NKNPPPDVTAVQQVLPAIARLILSDDKEVLA-DTCWALSYLTDGVNERIQLVLDSGVVP 177



 Score = 32.7 bits (71), Expect = 0.29
 Identities = 16/46 (34%), Positives = 28/46 (60%)
 Frame = +1

Query: 526 NPPIDELIAAGILPILVQCLSRADNPALQFETAWALTNIASGTSAQ 663
           N  I  ++ +G++P LV+ L   +   L  E AWA++N+ +GT+ Q
Sbjct: 164 NERIQLVLDSGVVPKLVELLGYPEVNVL--EAAWAISNVTAGTAQQ 207



 Score = 29.5 bits (63), Expect = 2.7
 Identities = 19/47 (40%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
 Frame = +1

Query: 556 GILPILVQCLSRA-DNPALQFETAWALTNIASGTSAQTNKVVHAGAV 693
           G +P+ V+ LS   DN A Q    WAL NIA       N V+  GA+
Sbjct: 47  GAVPMFVKLLSSVHDNVAEQ--AVWALGNIAGDGPLMRNTVIACGAL 91


>SB_35833| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1032

 Score = 52.0 bits (119), Expect = 4e-07
 Identities = 25/35 (71%), Positives = 27/35 (77%)
 Frame = +1

Query: 595 DNPALQFETAWALTNIASGTSAQTNKVVHAGAVPV 699
           D  +LQFE AWALTNIASGTS QT  VV+AG  PV
Sbjct: 760 DGHSLQFEAAWALTNIASGTSEQTQAVVNAGDGPV 794


>SB_22229| Best HMM Match : Arm (HMM E-Value=0)
          Length = 1050

 Score = 36.3 bits (80), Expect = 0.024
 Identities = 21/52 (40%), Positives = 28/52 (53%)
 Frame = +1

Query: 544 LIAAGILPILVQCLSRADNPALQFETAWALTNIASGTSAQTNKVVHAGAVPV 699
           ++  G L  LV CL   D P ++   AWAL  IA   +  +  VV AGAVP+
Sbjct: 119 VVDCGALDALVICLEEFD-PGVKEAAAWALGYIARHNAELSQAVVDAGAVPL 169


>SB_53106| Best HMM Match : PLAT (HMM E-Value=0)
          Length = 1790

 Score = 35.9 bits (79), Expect = 0.032
 Identities = 17/40 (42%), Positives = 26/40 (65%)
 Frame = +1

Query: 556  GILPILVQCLSRADNPALQFETAWALTNIASGTSAQTNKV 675
            G +PI+V+CLS   N  ++F  A  L N++SGT +  NK+
Sbjct: 1216 GGIPIVVRCLSH-QNDQVRFAAACVLRNLSSGTKSDQNKL 1254


>SB_19563| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 208

 Score = 33.5 bits (73), Expect = 0.17
 Identities = 16/47 (34%), Positives = 29/47 (61%)
 Frame = +1

Query: 559 ILPILVQCLSRADNPALQFETAWALTNIASGTSAQTNKVVHAGAVPV 699
           +L  ++ CL ++ +  ++ E+ W L+N+ +G +     VVHAG VPV
Sbjct: 20  LLHAVMACL-QSSHRHVRKESLWVLSNLTAGPAESCWAVVHAGLVPV 65


>SB_3360| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 205

 Score = 33.1 bits (72), Expect = 0.22
 Identities = 14/31 (45%), Positives = 20/31 (64%)
 Frame = +1

Query: 598 NPALQFETAWALTNIASGTSAQTNKVVHAGA 690
           N  LQ E AW +TN+++GT   T +V+ A A
Sbjct: 112 NIDLQLEAAWCITNLSAGTHEDTLRVLKAAA 142



 Score = 30.7 bits (66), Expect = 1.2
 Identities = 16/48 (33%), Positives = 24/48 (50%)
 Frame = +2

Query: 260 VFKNAGKDVDEMRRRRNEVTVELRKNKREETLQKRRNVPISYSTDEEE 403
           ++K  G  V   R RR     +LRK +RE  L  +R   I ++ +E E
Sbjct: 6   LYKQGGHSVQAQRSRRRGQEADLRKERRERLLSSKR---IRFAEEEAE 50


>SB_47670| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 566

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 17/53 (32%), Positives = 28/53 (52%)
 Frame = +2

Query: 245 EKPLHVFKNAGKDVDEMRRRRNEVTVELRKNKREETLQKRRNVPISYSTDEEE 403
           + P  V+K A     +  R+R+E T E++K  +    +KRR +  S   +EEE
Sbjct: 118 DMPKAVYKLAVLSAGKKIRKRHEKTTEMQKQTKMVPRKKRRVLSSSEEEEEEE 170


>SB_17370| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1743

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 17/56 (30%), Positives = 23/56 (41%)
 Frame = -1

Query: 430  VGGSEVLVDLLLIGRIANGHITPFLKCFLSFVFS*LDCDFIPSPAHFIDIFACILE 263
            +GG+ V +D  +IGRI       FL CF +       C     P H      C+ E
Sbjct: 1488 IGGTSVSLDHRMIGRITRKFFVDFL-CFRNTAILRSSCKLQYLPIHVSGFSRCLFE 1542


>SB_5831| Best HMM Match : TolA (HMM E-Value=0.0037)
          Length = 703

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 22/87 (25%), Positives = 40/87 (45%)
 Frame = +2

Query: 266 KNAGKDVDEMRRRRNEVTVELRKNKREETLQKRRNVPISYSTDEEEIDKNLATTDLDELV 445
           + A K  +E  R+R E     +K K+EE L++++   +    +E+E  + L     + + 
Sbjct: 260 EEAEKKREEEERKRREEEEAAQKWKKEELLRQQQ---LEREKEEQERAERLQREREEAME 316

Query: 446 MNAANAENPEAQLAAVQQCRKCSRVIK 526
                 E  EA+ AA +  RK +   K
Sbjct: 317 AEDLAEEAAEAEAAAAEAARKAAEEAK 343


>SB_40582| Best HMM Match : Kazal_1 (HMM E-Value=0)
          Length = 1568

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = -2

Query: 291 SSTSLPAFLNTCSGFSLDQSPFYLCSL 211
           ++T LP   + C+GFS D  PF  C +
Sbjct: 403 TTTELPTTPDPCAGFSCDSPPFSTCKV 429


>SB_11650| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 336

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 26/111 (23%), Positives = 47/111 (42%)
 Frame = +2

Query: 239 SSEKPLHVFKNAGKDVDEMRRRRNEVTVELRKNKREETLQKRRNVPISYSTDEEEIDKNL 418
           S ++ L++  N G+D    R  R    +   KNK +       +  I++S D+   D+  
Sbjct: 84  SGKEHLNMATN-GRDRTGDRYHRTRSAINDSKNKIQPNNTSTNSTRITWSMDDPATDEVF 142

Query: 419 ATTDLDELVMNAANAENPEAQLAAVQQCRKCSRVIKTRLLMSS*LLEYSPS 571
              D+DEL     +A +    L    + + CS ++   L +   +   SPS
Sbjct: 143 RELDVDELRWPEEDARDSSQDLK--NKTKVCSPLLDENLGILPGVAPLSPS 191


>SB_22495| Best HMM Match : DUF116 (HMM E-Value=8.1)
          Length = 440

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 17/56 (30%), Positives = 23/56 (41%)
 Frame = -1

Query: 430 VGGSEVLVDLLLIGRIANGHITPFLKCFLSFVFS*LDCDFIPSPAHFIDIFACILE 263
           +GG+ V +D  +IGRI       FL CF +       C     P H      C+ E
Sbjct: 341 IGGTSVSLDHRMIGRITRKLFVDFL-CFRNTAILRSSCKLQYLPIHVSGFSRCLFE 395


>SB_21701| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1906

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 24/86 (27%), Positives = 43/86 (50%)
 Frame = +2

Query: 278  KDVDEMRRRRNEVTVELRKNKREETLQKRRNVPISYSTDEEEIDKNLATTDLDELVMNAA 457
            KD DEMRR   ++T +LR+  +   L +     +  S    + +K    T +DEL  + A
Sbjct: 1545 KDADEMRRNIIKLTTQLREADKAR-LNQGEIDDLKLSLSISQAEKQQLQTRIDEL--DRA 1601

Query: 458  NAENPEAQLAAVQQCRKCSRVIKTRL 535
            +A+  E     VQ+ +K +  +K ++
Sbjct: 1602 HADLRET-AEEVQRIKKENASLKAQV 1626


>SB_52978| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 879

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 21/60 (35%), Positives = 31/60 (51%), Gaps = 5/60 (8%)
 Frame = +2

Query: 239 SSEKPLHVFKNAGKDVD-----EMRRRRNEVTVELRKNKREETLQKRRNVPISYSTDEEE 403
           SS+K     ++ GKDVD     E+RR+R E      + +REE  + RR    +   +EEE
Sbjct: 450 SSDK--ETVRSDGKDVDDSGSLELRRQREEARRLEEQRRREEEERTRREKEEAQRREEEE 507


>SB_38184| Best HMM Match : HisKA_2 (HMM E-Value=8.6)
          Length = 528

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 17/56 (30%), Positives = 23/56 (41%)
 Frame = -1

Query: 430 VGGSEVLVDLLLIGRIANGHITPFLKCFLSFVFS*LDCDFIPSPAHFIDIFACILE 263
           +GG+ V +D  +IGRI       FL CF +       C     P H      C+ E
Sbjct: 394 IGGTSVSLDHRMIGRITRKLFVDFL-CFRNTAILRSSCKLQYLPIHVSGFSRCLFE 448


>SB_45305| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 593

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 14/65 (21%), Positives = 30/65 (46%)
 Frame = +2

Query: 257 HVFKNAGKDVDEMRRRRNEVTVELRKNKREETLQKRRNVPISYSTDEEEIDKNLATTDLD 436
           H    A + +DE R+R+++  V ++ +  EE L+   N  ++ +   E   + +   +  
Sbjct: 238 HDKSQANRSIDEDRKRKSDELVSVKGDSEEEGLENVENTDVNGNEGPEAKKRKVIYQENS 297

Query: 437 ELVMN 451
            L  N
Sbjct: 298 GLAQN 302


>SB_47985| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1681

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 12/43 (27%), Positives = 22/43 (51%)
 Frame = -3

Query: 191 NYTKKQRINIKLLSSKLIKHVLRHYTSDGGLTSIFTKYSTTHK 63
           NY ++ + ++  L+S+ + +   H   D  LTS    Y+  HK
Sbjct: 128 NYAREHKRDVTSLTSQTLHYAREHKRDDTSLTSQTLHYAREHK 170


>SB_46871| Best HMM Match : PAN (HMM E-Value=1)
          Length = 525

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 14/39 (35%), Positives = 20/39 (51%)
 Frame = +2

Query: 314 VTVELRKNKREETLQKRRNVPISYSTDEEEIDKNLATTD 430
           V ++ R N      QK+ N+P S   D E ID++L   D
Sbjct: 380 VRLDSRTNSSSSKRQKKTNLPKSGENDVEIIDRSLVRDD 418


>SB_27445| Best HMM Match : DUF227 (HMM E-Value=9.9)
          Length = 129

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 17/56 (30%), Positives = 23/56 (41%)
 Frame = -1

Query: 430 VGGSEVLVDLLLIGRIANGHITPFLKCFLSFVFS*LDCDFIPSPAHFIDIFACILE 263
           +GG+ V +D  +IGRI       FL CF +       C     P H      C+ E
Sbjct: 5   IGGTSVSLDHRMIGRITRKLFVDFL-CFCNTAILRSSCKLQYLPIHVSVFSRCLFE 59


>SB_48321| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 357

 Score = 27.9 bits (59), Expect = 8.4
 Identities = 18/77 (23%), Positives = 34/77 (44%), Gaps = 1/77 (1%)
 Frame = +2

Query: 311 EVTVELRKNKR-EETLQKRRNVPISYSTDEEEIDKNLATTDLDELVMNAANAENPEAQLA 487
           E++  L  + R +ET     N P+S     +E + +   T  DE++    + E   A ++
Sbjct: 183 EISESLLSSLRPKETFHGSENRPLSIKRQRKEAETSTVQTTADEVLKALKSVETHTANVS 242

Query: 488 AVQQCRKCSRVIKTRLL 538
             +Q    S++    LL
Sbjct: 243 MPEQPASFSQISDPHLL 259


>SB_19076| Best HMM Match : HECT (HMM E-Value=0)
          Length = 2018

 Score = 27.9 bits (59), Expect = 8.4
 Identities = 15/41 (36%), Positives = 20/41 (48%)
 Frame = +1

Query: 412 EPRYHRP**AGDERCQRRKP*STVGCCATMQKMLSCDKNPP 534
           E R H P  A D R + +    T+G CAT   +   D +PP
Sbjct: 632 EQRQHHPHRANDTRPKTKS--KTIGTCATTNPLPDHDLDPP 670


>SB_5618| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 801

 Score = 27.9 bits (59), Expect = 8.4
 Identities = 15/49 (30%), Positives = 25/49 (51%)
 Frame = +2

Query: 359 KRRNVPISYSTDEEEIDKNLATTDLDELVMNAANAENPEAQLAAVQQCR 505
           K  N+P + +T +EE    L T D  E  +N  N+ + +  L A+Q  +
Sbjct: 19  KENNLPRTLATLQEETGITLNTVDSVESFVNEINSGHWDTVLTAIQSLK 67


>SB_51335| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 576

 Score = 27.9 bits (59), Expect = 8.4
 Identities = 20/64 (31%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
 Frame = +2

Query: 266 KNAGKDVDEMRRRRNEVTVELRKNKREETLQKRRNVPISYSTDEEEI--DKNLATTDLDE 439
           K   K  +E    R E   ++RK K+E+  +KR+ V   +++ EEE+   K  A++  D+
Sbjct: 138 KTNNKSDNEEEDERQEK--KIRKQKQEK--RKRKTVKADFNSSEEEVSSQKTKASSRKDQ 193

Query: 440 LVMN 451
             MN
Sbjct: 194 KKMN 197


>SB_30637| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1137

 Score = 27.9 bits (59), Expect = 8.4
 Identities = 18/72 (25%), Positives = 32/72 (44%)
 Frame = +2

Query: 266  KNAGKDVDEMRRRRNEVTVELRKNKREETLQKRRNVPISYSTDEEEIDKNLATTDLDELV 445
            K    + DE+ R++ E   E ++ + EE+ +K          DEEE ++       D+  
Sbjct: 1038 KKMKDEQDEIERKKAE-EEEKKRKEEEESKKKDEKEKEEEDEDEEEEEEKKEDAKTDDSE 1096

Query: 446  MNAANAENPEAQ 481
               A  E+ EA+
Sbjct: 1097 TKEAEPESKEAE 1108


>SB_24364| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 648

 Score = 27.9 bits (59), Expect = 8.4
 Identities = 13/34 (38%), Positives = 22/34 (64%)
 Frame = +2

Query: 266 KNAGKDVDEMRRRRNEVTVELRKNKREETLQKRR 367
           K+  +D DE++R+R    V +R+ +R+   QKRR
Sbjct: 205 KDEKEDEDELKRKR--TGVRIRRRRRQRRKQKRR 236


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,269,579
Number of Sequences: 59808
Number of extensions: 478520
Number of successful extensions: 1466
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 1300
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1462
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1829596184
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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