Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20372
(700 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g02150.1 68417.m00287 importin alpha-2 subunit identical to i... 89 2e-18
At1g09270.2 68414.m01036 importin alpha-1 subunit, putative (IMP... 87 8e-18
At1g09270.1 68414.m01035 importin alpha-1 subunit, putative (IMP... 87 8e-18
At4g16143.1 68417.m02447 importin alpha-2, putative (IMPA-2) sim... 85 4e-17
At1g02690.2 68414.m00220 importin alpha-2 subunit, putative simi... 85 4e-17
At1g02690.1 68414.m00219 importin alpha-2 subunit, putative simi... 85 4e-17
At3g06720.2 68416.m00797 importin alpha-1 subunit, putative (IMP... 83 2e-16
At3g06720.1 68416.m00796 importin alpha-1 subunit, putative (IMP... 83 2e-16
At5g49310.1 68418.m06102 importin alpha-1 subunit, putative simi... 77 1e-14
At3g05720.1 68416.m00640 importin alpha-1 subunit, putative simi... 66 2e-11
At5g03070.1 68418.m00255 armadillo/beta-catenin repeat family pr... 54 7e-08
At5g52000.1 68418.m06453 importin alpha-1 subunit, putative simi... 44 1e-04
At4g38600.2 68417.m05463 HECT-domain-containing protein / ubiqui... 33 0.14
At4g38600.1 68417.m05464 HECT-domain-containing protein / ubiqui... 33 0.14
At3g49570.1 68416.m05417 expressed protein 31 0.73
At3g31910.1 68416.m04037 hypothetical protein 30 1.7
At3g05760.1 68416.m00647 expressed protein 29 2.2
At3g18290.1 68416.m02326 zinc finger protein-related weak alignm... 29 3.9
At4g12710.1 68417.m01995 armadillo/beta-catenin repeat family pr... 28 5.2
At3g20490.1 68416.m02595 expressed protein 28 5.2
At1g75370.1 68414.m08754 SEC14 cytosolic factor, putative / phos... 28 5.2
At4g12680.1 68417.m01992 expressed protein ; expression supporte... 28 6.8
At3g49580.1 68416.m05418 expressed protein 28 6.8
At2g48120.1 68415.m06024 pale cress protein (PAC) identical to P... 28 6.8
At5g24660.1 68418.m02914 expressed protein 27 9.0
At5g04640.1 68418.m00470 MADS-box family protein SLM3 MADS-box p... 27 9.0
At1g02570.1 68414.m00208 expressed protein 27 9.0
>At4g02150.1 68417.m00287 importin alpha-2 subunit identical to
importin alpha-2 subunit (Karyopherin alpha-2 subunit)
(KAP alpha) SP:O04294 from [Arabidopsis thaliana]
Length = 531
Score = 89.4 bits (212), Expect = 2e-18
Identities = 38/67 (56%), Positives = 55/67 (82%)
Frame = +1
Query: 499 MQKMLSCDKNPPIDELIAAGILPILVQCLSRADNPALQFETAWALTNIASGTSAQTNKVV 678
++K+LS ++NPPI+E++ +G++P +V+ LSR D P LQFE AWALTNIASGTS TN ++
Sbjct: 99 LRKLLSIEQNPPINEVVQSGVVPRVVKFLSRDDFPKLQFEAAWALTNIASGTSENTNVII 158
Query: 679 HAGAVPV 699
+GAVP+
Sbjct: 159 ESGAVPI 165
Score = 48.4 bits (110), Expect = 5e-06
Identities = 32/81 (39%), Positives = 44/81 (54%), Gaps = 5/81 (6%)
Frame = +2
Query: 281 DVDEMRRRRNEVTVELRKNKREETLQKRR---NVPISYSTDEEEIDKNLATTDLDELVMN 451
D +E RRRR + VE+RKNKREE LQK+R ++ +T + E D + A D L
Sbjct: 21 DAEEGRRRREDNLVEIRKNKREENLQKKRFTSSMAFGSATGQTEQDLSSANQLKDNLPAM 80
Query: 452 AAN--AENPEAQLAAVQQCRK 508
A +E+ +QL A RK
Sbjct: 81 VAGIWSEDSNSQLEATNLLRK 101
Score = 36.3 bits (80), Expect = 0.020
Identities = 20/62 (32%), Positives = 33/62 (53%)
Frame = +1
Query: 511 LSCDKNPPIDELIAAGILPILVQCLSRADNPALQFETAWALTNIASGTSAQTNKVVHAGA 690
LS + N I +I AG++P L+Q L + +P++ + NI +G QT V+ A
Sbjct: 272 LSDNSNDKIQAVIEAGVVPRLIQLLGHS-SPSVLIPALRTIGNIVTGDDLQTQMVLDQQA 330
Query: 691 VP 696
+P
Sbjct: 331 LP 332
>At1g09270.2 68414.m01036 importin alpha-1 subunit, putative (IMPA4)
similar to importin alpha-1 subunit (Karyopherin alpha-1
subunit, KAP alpha) [Arabidopsis thaliana]
SWISS-PROT:Q96321
Length = 538
Score = 87.4 bits (207), Expect = 8e-18
Identities = 38/66 (57%), Positives = 51/66 (77%)
Frame = +1
Query: 502 QKMLSCDKNPPIDELIAAGILPILVQCLSRADNPALQFETAWALTNIASGTSAQTNKVVH 681
+K+LS +++PPIDE+I AG++P V+ L R D+P LQFE AWALTN+ASGTS T V+
Sbjct: 104 RKLLSIERSPPIDEVIKAGVIPRFVEFLGRHDHPQLQFEAAWALTNVASGTSDHTRVVIE 163
Query: 682 AGAVPV 699
GAVP+
Sbjct: 164 QGAVPI 169
Score = 46.0 bits (104), Expect = 2e-05
Identities = 31/90 (34%), Positives = 48/90 (53%), Gaps = 12/90 (13%)
Frame = +2
Query: 275 GKDVDEMRRRRNEVTVELRKNKREETLQKRR--------NVPISYSTDEEE----IDKNL 418
G D DE RRRR + VE+RKNKRE++L K+R +P+ D + ++K L
Sbjct: 19 GVDADEARRRREDNLVEIRKNKREDSLLKKRREGMMLQQQLPLGAGLDGPQTAAAVEKRL 78
Query: 419 ATTDLDELVMNAANAENPEAQLAAVQQCRK 508
+++ +++P+AQL A Q RK
Sbjct: 79 EGI---PMMVQGVYSDDPQAQLEATTQFRK 105
Score = 37.9 bits (84), Expect = 0.006
Identities = 16/50 (32%), Positives = 28/50 (56%)
Frame = +1
Query: 544 LIAAGILPILVQCLSRADNPALQFETAWALTNIASGTSAQTNKVVHAGAV 693
+I +G+LP L L++ +++ E W ++NI +G Q VV AG +
Sbjct: 329 IIESGVLPHLYNLLTQNHKKSIKKEACWTISNITAGNKLQIEAVVGAGII 378
Score = 30.3 bits (65), Expect = 1.3
Identities = 16/50 (32%), Positives = 28/50 (56%)
Frame = +1
Query: 544 LIAAGILPILVQCLSRADNPALQFETAWALTNIASGTSAQTNKVVHAGAV 693
+I G +PI V+ L+ A + + + WAL N+A + N V++ GA+
Sbjct: 161 VIEQGAVPIFVKLLTSASDDVRE-QAVWALGNVAGDSPNCRNLVLNYGAL 209
>At1g09270.1 68414.m01035 importin alpha-1 subunit, putative (IMPA4)
similar to importin alpha-1 subunit (Karyopherin alpha-1
subunit, KAP alpha) [Arabidopsis thaliana]
SWISS-PROT:Q96321
Length = 538
Score = 87.4 bits (207), Expect = 8e-18
Identities = 38/66 (57%), Positives = 51/66 (77%)
Frame = +1
Query: 502 QKMLSCDKNPPIDELIAAGILPILVQCLSRADNPALQFETAWALTNIASGTSAQTNKVVH 681
+K+LS +++PPIDE+I AG++P V+ L R D+P LQFE AWALTN+ASGTS T V+
Sbjct: 104 RKLLSIERSPPIDEVIKAGVIPRFVEFLGRHDHPQLQFEAAWALTNVASGTSDHTRVVIE 163
Query: 682 AGAVPV 699
GAVP+
Sbjct: 164 QGAVPI 169
Score = 46.0 bits (104), Expect = 2e-05
Identities = 31/90 (34%), Positives = 48/90 (53%), Gaps = 12/90 (13%)
Frame = +2
Query: 275 GKDVDEMRRRRNEVTVELRKNKREETLQKRR--------NVPISYSTDEEE----IDKNL 418
G D DE RRRR + VE+RKNKRE++L K+R +P+ D + ++K L
Sbjct: 19 GVDADEARRRREDNLVEIRKNKREDSLLKKRREGMMLQQQLPLGAGLDGPQTAAAVEKRL 78
Query: 419 ATTDLDELVMNAANAENPEAQLAAVQQCRK 508
+++ +++P+AQL A Q RK
Sbjct: 79 EGI---PMMVQGVYSDDPQAQLEATTQFRK 105
Score = 37.9 bits (84), Expect = 0.006
Identities = 16/50 (32%), Positives = 28/50 (56%)
Frame = +1
Query: 544 LIAAGILPILVQCLSRADNPALQFETAWALTNIASGTSAQTNKVVHAGAV 693
+I +G+LP L L++ +++ E W ++NI +G Q VV AG +
Sbjct: 329 IIESGVLPHLYNLLTQNHKKSIKKEACWTISNITAGNKLQIEAVVGAGII 378
Score = 30.3 bits (65), Expect = 1.3
Identities = 16/50 (32%), Positives = 28/50 (56%)
Frame = +1
Query: 544 LIAAGILPILVQCLSRADNPALQFETAWALTNIASGTSAQTNKVVHAGAV 693
+I G +PI V+ L+ A + + + WAL N+A + N V++ GA+
Sbjct: 161 VIEQGAVPIFVKLLTSASDDVRE-QAVWALGNVAGDSPNCRNLVLNYGAL 209
>At4g16143.1 68417.m02447 importin alpha-2, putative (IMPA-2)
similar to importin alpha 2 [Capsicum annuum]
GI:13752562; contains Pfam profiles PF01749: Importin
beta binding domain, PF00514:
Armadillo/beta-catenin-like repeat; non-consensus GG
donor splice site at exon 1 and 6; CT acceptor splice
site at exon 2
Length = 444
Score = 85.0 bits (201), Expect = 4e-17
Identities = 38/66 (57%), Positives = 51/66 (77%)
Frame = +1
Query: 502 QKMLSCDKNPPIDELIAAGILPILVQCLSRADNPALQFETAWALTNIASGTSAQTNKVVH 681
+K+LS +++PPI+E+I AG++P V+ L+R D P LQFE AWALTNIASGTS T V+
Sbjct: 102 RKLLSIERSPPIEEVIDAGVVPRFVEFLTREDYPQLQFEAAWALTNIASGTSENTKVVIE 161
Query: 682 AGAVPV 699
GAVP+
Sbjct: 162 HGAVPI 167
Score = 41.1 bits (92), Expect = 7e-04
Identities = 18/29 (62%), Positives = 24/29 (82%)
Frame = +2
Query: 281 DVDEMRRRRNEVTVELRKNKREETLQKRR 367
D +E RRRR + VE+RK+KREE+LQK+R
Sbjct: 21 DAEEGRRRREDNMVEIRKSKREESLQKKR 49
Score = 36.3 bits (80), Expect = 0.020
Identities = 19/56 (33%), Positives = 30/56 (53%)
Frame = +1
Query: 529 PPIDELIAAGILPILVQCLSRADNPALQFETAWALTNIASGTSAQTNKVVHAGAVP 696
PP D++ A LP L + + D L + WAL+ ++ GT+ + V+ AG VP
Sbjct: 240 PPFDQVRPA--LPALERLIHSTDEEVLT-DACWALSYLSDGTNDKIQSVIEAGVVP 292
>At1g02690.2 68414.m00220 importin alpha-2 subunit, putative similar
to importin alpha-2 subunit (Karyopherin alpha-2
subunit) (KAP alpha) SP:O04294 from [Arabidopsis
thaliana]
Length = 539
Score = 85.0 bits (201), Expect = 4e-17
Identities = 37/69 (53%), Positives = 54/69 (78%)
Frame = +1
Query: 493 ATMQKMLSCDKNPPIDELIAAGILPILVQCLSRADNPALQFETAWALTNIASGTSAQTNK 672
A+ +++LS ++NPPI+E++ +G++P +VQ LSR D LQFE AWALTNIASGTS T
Sbjct: 98 ASFRRLLSIERNPPINEVVQSGVVPHIVQFLSRDDFTQLQFEAAWALTNIASGTSENTRV 157
Query: 673 VVHAGAVPV 699
++ +GAVP+
Sbjct: 158 IIDSGAVPL 166
Score = 46.8 bits (106), Expect = 1e-05
Identities = 32/82 (39%), Positives = 44/82 (53%), Gaps = 6/82 (7%)
Frame = +2
Query: 281 DVDEMRRRRNEVTVELRKNKREETLQKRRNV---PISYSTDEEEIDKNLAT-TDLDELVM 448
D DE RRRR + VE+RKNKREE LQK+R P S ++ +L T T L+ +
Sbjct: 21 DADEGRRRREDNMVEIRKNKREENLQKKRREGFNPSMASQPGQDFSSSLPTETRLENIQQ 80
Query: 449 NAAN--AENPEAQLAAVQQCRK 508
A +E+ + QL A R+
Sbjct: 81 MIAGVMSEDRDLQLEATASFRR 102
Score = 36.7 bits (81), Expect = 0.015
Identities = 21/62 (33%), Positives = 33/62 (53%)
Frame = +1
Query: 511 LSCDKNPPIDELIAAGILPILVQCLSRADNPALQFETAWALTNIASGTSAQTNKVVHAGA 690
LS N I +I AG++P LVQ L+ +P++ + NI +G QT V+ + A
Sbjct: 274 LSDGTNEKIQTVIDAGVIPRLVQLLAH-PSPSVLIPALRTIGNIVTGDDIQTQAVISSQA 332
Query: 691 VP 696
+P
Sbjct: 333 LP 334
Score = 33.9 bits (74), Expect = 0.10
Identities = 18/58 (31%), Positives = 28/58 (48%)
Frame = +1
Query: 523 KNPPIDELIAAGILPILVQCLSRADNPALQFETAWALTNIASGTSAQTNKVVHAGAVP 696
K P E LP L + L D L + +WAL+ ++ GT+ + V+ AG +P
Sbjct: 236 KPQPAFEQQTKAALPALERLLHSTDEEVLT-DASWALSYLSDGTNEKIQTVIDAGVIP 292
>At1g02690.1 68414.m00219 importin alpha-2 subunit, putative similar
to importin alpha-2 subunit (Karyopherin alpha-2
subunit) (KAP alpha) SP:O04294 from [Arabidopsis
thaliana]
Length = 538
Score = 85.0 bits (201), Expect = 4e-17
Identities = 37/69 (53%), Positives = 54/69 (78%)
Frame = +1
Query: 493 ATMQKMLSCDKNPPIDELIAAGILPILVQCLSRADNPALQFETAWALTNIASGTSAQTNK 672
A+ +++LS ++NPPI+E++ +G++P +VQ LSR D LQFE AWALTNIASGTS T
Sbjct: 98 ASFRRLLSIERNPPINEVVQSGVVPHIVQFLSRDDFTQLQFEAAWALTNIASGTSENTRV 157
Query: 673 VVHAGAVPV 699
++ +GAVP+
Sbjct: 158 IIDSGAVPL 166
Score = 46.8 bits (106), Expect = 1e-05
Identities = 32/82 (39%), Positives = 44/82 (53%), Gaps = 6/82 (7%)
Frame = +2
Query: 281 DVDEMRRRRNEVTVELRKNKREETLQKRRNV---PISYSTDEEEIDKNLAT-TDLDELVM 448
D DE RRRR + VE+RKNKREE LQK+R P S ++ +L T T L+ +
Sbjct: 21 DADEGRRRREDNMVEIRKNKREENLQKKRREGFNPSMASQPGQDFSSSLPTETRLENIQQ 80
Query: 449 NAAN--AENPEAQLAAVQQCRK 508
A +E+ + QL A R+
Sbjct: 81 MIAGVMSEDRDLQLEATASFRR 102
Score = 36.7 bits (81), Expect = 0.015
Identities = 21/62 (33%), Positives = 33/62 (53%)
Frame = +1
Query: 511 LSCDKNPPIDELIAAGILPILVQCLSRADNPALQFETAWALTNIASGTSAQTNKVVHAGA 690
LS N I +I AG++P LVQ L+ +P++ + NI +G QT V+ + A
Sbjct: 273 LSDGTNEKIQTVIDAGVIPRLVQLLAH-PSPSVLIPALRTIGNIVTGDDIQTQAVISSQA 331
Query: 691 VP 696
+P
Sbjct: 332 LP 333
Score = 33.1 bits (72), Expect = 0.18
Identities = 18/56 (32%), Positives = 30/56 (53%)
Frame = +1
Query: 529 PPIDELIAAGILPILVQCLSRADNPALQFETAWALTNIASGTSAQTNKVVHAGAVP 696
P ++ AA LP L + L D L + +WAL+ ++ GT+ + V+ AG +P
Sbjct: 239 PAFEQTKAA--LPALERLLHSTDEEVLT-DASWALSYLSDGTNEKIQTVIDAGVIP 291
>At3g06720.2 68416.m00797 importin alpha-1 subunit, putative (IMPA1)
similar to importin alpha-1 subunit (Karyopherin alpha-1
subunit, KAP alpha) [Arabidopsis thaliana]
SWISS-PROT:Q96321
Length = 532
Score = 82.6 bits (195), Expect = 2e-16
Identities = 36/66 (54%), Positives = 51/66 (77%)
Frame = +1
Query: 502 QKMLSCDKNPPIDELIAAGILPILVQCLSRADNPALQFETAWALTNIASGTSAQTNKVVH 681
+K+LS +++PPI+E+I+AG++P V+ L + D PA+QFE AWALTNIASGTS T V+
Sbjct: 97 RKLLSIERSPPIEEVISAGVVPRFVEFLKKEDYPAIQFEAAWALTNIASGTSDHTKVVID 156
Query: 682 AGAVPV 699
AVP+
Sbjct: 157 HNAVPI 162
Score = 42.3 bits (95), Expect = 3e-04
Identities = 29/81 (35%), Positives = 43/81 (53%), Gaps = 5/81 (6%)
Frame = +2
Query: 281 DVDEMRRRRNEVTVELRKNKREETLQKRRNVPISY-----STDEEEIDKNLATTDLDELV 445
D +E RRRR + VE+RK+KREE+L K+R + S +DK L L ++V
Sbjct: 21 DAEEGRRRREDNMVEIRKSKREESLMKKRREGMQALQGFPSASAASVDKKL--DSLKDMV 78
Query: 446 MNAANAENPEAQLAAVQQCRK 508
+++P QL + Q RK
Sbjct: 79 AGVW-SDDPALQLESTTQFRK 98
Score = 31.5 bits (68), Expect = 0.56
Identities = 18/56 (32%), Positives = 29/56 (51%)
Frame = +1
Query: 529 PPIDELIAAGILPILVQCLSRADNPALQFETAWALTNIASGTSAQTNKVVHAGAVP 696
P D++ A LP L + + D L + WAL+ ++ GT+ + V+ AG VP
Sbjct: 235 PHFDQVKPA--LPALERLIHSDDEEVLT-DACWALSYLSDGTNDKIQTVIQAGVVP 287
>At3g06720.1 68416.m00796 importin alpha-1 subunit, putative (IMPA1)
similar to importin alpha-1 subunit (Karyopherin alpha-1
subunit, KAP alpha) [Arabidopsis thaliana]
SWISS-PROT:Q96321
Length = 532
Score = 82.6 bits (195), Expect = 2e-16
Identities = 36/66 (54%), Positives = 51/66 (77%)
Frame = +1
Query: 502 QKMLSCDKNPPIDELIAAGILPILVQCLSRADNPALQFETAWALTNIASGTSAQTNKVVH 681
+K+LS +++PPI+E+I+AG++P V+ L + D PA+QFE AWALTNIASGTS T V+
Sbjct: 97 RKLLSIERSPPIEEVISAGVVPRFVEFLKKEDYPAIQFEAAWALTNIASGTSDHTKVVID 156
Query: 682 AGAVPV 699
AVP+
Sbjct: 157 HNAVPI 162
Score = 42.3 bits (95), Expect = 3e-04
Identities = 29/81 (35%), Positives = 43/81 (53%), Gaps = 5/81 (6%)
Frame = +2
Query: 281 DVDEMRRRRNEVTVELRKNKREETLQKRRNVPISY-----STDEEEIDKNLATTDLDELV 445
D +E RRRR + VE+RK+KREE+L K+R + S +DK L L ++V
Sbjct: 21 DAEEGRRRREDNMVEIRKSKREESLMKKRREGMQALQGFPSASAASVDKKL--DSLKDMV 78
Query: 446 MNAANAENPEAQLAAVQQCRK 508
+++P QL + Q RK
Sbjct: 79 AGVW-SDDPALQLESTTQFRK 98
Score = 31.5 bits (68), Expect = 0.56
Identities = 18/56 (32%), Positives = 29/56 (51%)
Frame = +1
Query: 529 PPIDELIAAGILPILVQCLSRADNPALQFETAWALTNIASGTSAQTNKVVHAGAVP 696
P D++ A LP L + + D L + WAL+ ++ GT+ + V+ AG VP
Sbjct: 235 PHFDQVKPA--LPALERLIHSDDEEVLT-DACWALSYLSDGTNDKIQTVIQAGVVP 287
>At5g49310.1 68418.m06102 importin alpha-1 subunit, putative similar
to importin alpha-1 subunit (Karyopherin alpha-1
subunit, KAP alpha) [Arabidopsis thaliana]
SWISS-PROT:Q96321
Length = 519
Score = 76.6 bits (180), Expect = 1e-14
Identities = 34/64 (53%), Positives = 45/64 (70%)
Frame = +1
Query: 508 MLSCDKNPPIDELIAAGILPILVQCLSRADNPALQFETAWALTNIASGTSAQTNKVVHAG 687
+LS D++PP D +I +G++P V+ L + DNP LQFE AWALTNIASG S T V+ G
Sbjct: 97 VLSFDRSPPTDNVIKSGVVPRFVEFLKKDDNPKLQFEAAWALTNIASGASEHTKVVIDHG 156
Query: 688 AVPV 699
VP+
Sbjct: 157 VVPL 160
Score = 39.9 bits (89), Expect = 0.002
Identities = 17/33 (51%), Positives = 23/33 (69%)
Frame = +2
Query: 281 DVDEMRRRRNEVTVELRKNKREETLQKRRNVPI 379
D +E RRRR + VE+RK+KR E L K+R V +
Sbjct: 21 DAEEGRRRREDFLVEIRKSKRNENLMKKRRVKV 53
Score = 38.3 bits (85), Expect = 0.005
Identities = 15/51 (29%), Positives = 27/51 (52%)
Frame = +1
Query: 544 LIAAGILPILVQCLSRADNPALQFETAWALTNIASGTSAQTNKVVHAGAVP 696
+I G+LP+L L++ ++ E W ++NI +G Q V+ A +P
Sbjct: 320 VINCGVLPVLADLLTQNHMRGIRREACWTISNITAGLEEQIQSVIDANLIP 370
>At3g05720.1 68416.m00640 importin alpha-1 subunit, putative similar
to importin alpha subunit (Karyopherin alpha subunit)
(KAP alpha) SP:O22478 from [Lycopersicon esculentum]
Length = 528
Score = 66.1 bits (154), Expect = 2e-11
Identities = 34/70 (48%), Positives = 46/70 (65%), Gaps = 2/70 (2%)
Frame = +1
Query: 496 TMQKMLSCDK--NPPIDELIAAGILPILVQCLSRADNPALQFETAWALTNIASGTSAQTN 669
T + L C + N ++E+I AG++P V+ L+ D+P LQFE AWALTNIASGTS T
Sbjct: 81 TQIRTLLCGEMFNVRVEEVIQAGLVPRFVEFLTWDDSPQLQFEAAWALTNIASGTSENTE 140
Query: 670 KVVHAGAVPV 699
V+ GAV +
Sbjct: 141 VVIDHGAVAI 150
Score = 39.9 bits (89), Expect = 0.002
Identities = 18/41 (43%), Positives = 27/41 (65%)
Frame = +2
Query: 296 RRRRNEVTVELRKNKREETLQKRRNVPISYSTDEEEIDKNL 418
RRRR + VE+RK KREE+L K+R + +S + +D+ L
Sbjct: 24 RRRREDDMVEIRKAKREESLLKKRREALPHSPSADSLDQKL 64
>At5g03070.1 68418.m00255 armadillo/beta-catenin repeat family
protein contains Pfam profile: PF00514
armadillo/beta-catenin-like repeat
Length = 483
Score = 54.4 bits (125), Expect = 7e-08
Identities = 24/62 (38%), Positives = 39/62 (62%)
Frame = +1
Query: 499 MQKMLSCDKNPPIDELIAAGILPILVQCLSRADNPALQFETAWALTNIASGTSAQTNKVV 678
++++LS + PP++ + AG +P+LVQCLS E+AW LTNIA+G +T ++
Sbjct: 107 LRRLLSKSEFPPVEAALRAGAIPLLVQCLSFGSPDEQLLESAWCLTNIAAGKPEETKALL 166
Query: 679 HA 684
A
Sbjct: 167 PA 168
Score = 39.5 bits (88), Expect = 0.002
Identities = 20/53 (37%), Positives = 34/53 (64%)
Frame = +1
Query: 535 IDELIAAGILPILVQCLSRADNPALQFETAWALTNIASGTSAQTNKVVHAGAV 693
ID L + L +L+ CL R+++ L+ E AW L+NIA+G S + +++H+ V
Sbjct: 302 IDRLATSSSLQLLIPCL-RSEHRVLKKEAAWVLSNIAAG-SIEHKRMIHSTEV 352
Score = 28.7 bits (61), Expect = 3.9
Identities = 13/45 (28%), Positives = 23/45 (51%)
Frame = +1
Query: 562 LPILVQCLSRADNPALQFETAWALTNIASGTSAQTNKVVHAGAVP 696
LP+L+ L + + + AWA+ N+A N ++ GA+P
Sbjct: 169 LPLLIAHLGEKSSAPVAEQCAWAIGNVAGEGEDLRNVLLSQGALP 213
>At5g52000.1 68418.m06453 importin alpha-1 subunit, putative similar
to importin alpha-1 subunit (Karyopherin alpha-1
subunit, KAP alpha) [Arabidopsis thaliana]
SWISS-PROT:Q96321
Length = 441
Score = 43.6 bits (98), Expect = 1e-04
Identities = 25/52 (48%), Positives = 31/52 (59%)
Frame = +1
Query: 544 LIAAGILPILVQCLSRADNPALQFETAWALTNIASGTSAQTNKVVHAGAVPV 699
+I +G++P LVQ L P LQ+E AWALTNIA VV+ AVPV
Sbjct: 45 VIRSGVVPRLVQLLKNQVFPKLQYEVAWALTNIAVD---NPGVVVNNNAVPV 93
Score = 37.9 bits (84), Expect = 0.006
Identities = 16/52 (30%), Positives = 28/52 (53%)
Frame = +1
Query: 544 LIAAGILPILVQCLSRADNPALQFETAWALTNIASGTSAQTNKVVHAGAVPV 699
+I +G LPI+ L+R ++ W ++NI +GT Q V+ A +P+
Sbjct: 250 VINSGALPIISNMLTRNHENKIKKCACWVISNITAGTKEQIQSVIDANLIPI 301
>At4g38600.2 68417.m05463 HECT-domain-containing protein /
ubiquitin-transferase family protein similar to
SP|Q14669Thyroid receptor interacting protein 12
(TRIP12) {Homo sapiens}; contains Pfam profile PF00632:
HECT-domain (ubiquitin-transferase)
Length = 1794
Score = 33.5 bits (73), Expect = 0.14
Identities = 19/63 (30%), Positives = 28/63 (44%)
Frame = +1
Query: 505 KMLSCDKNPPIDELIAAGILPILVQCLSRADNPALQFETAWALTNIASGTSAQTNKVVHA 684
+MLS + +P+LV L+ NP + A ALT++ + VVH
Sbjct: 147 EMLSIGTEDSLSTFSVDSFVPVLVGLLNHESNPDIMLLAARALTHLCDVLPSSCAAVVHY 206
Query: 685 GAV 693
GAV
Sbjct: 207 GAV 209
>At4g38600.1 68417.m05464 HECT-domain-containing protein /
ubiquitin-transferase family protein similar to
SP|Q14669Thyroid receptor interacting protein 12
(TRIP12) {Homo sapiens}; contains Pfam profile PF00632:
HECT-domain (ubiquitin-transferase)
Length = 1888
Score = 33.5 bits (73), Expect = 0.14
Identities = 19/63 (30%), Positives = 28/63 (44%)
Frame = +1
Query: 505 KMLSCDKNPPIDELIAAGILPILVQCLSRADNPALQFETAWALTNIASGTSAQTNKVVHA 684
+MLS + +P+LV L+ NP + A ALT++ + VVH
Sbjct: 220 EMLSIGTEDSLSTFSVDSFVPVLVGLLNHESNPDIMLLAARALTHLCDVLPSSCAAVVHY 279
Query: 685 GAV 693
GAV
Sbjct: 280 GAV 282
>At3g49570.1 68416.m05417 expressed protein
Length = 97
Score = 31.1 bits (67), Expect = 0.73
Identities = 18/57 (31%), Positives = 31/57 (54%)
Frame = +2
Query: 272 AGKDVDEMRRRRNEVTVELRKNKREETLQKRRNVPISYSTDEEEIDKNLATTDLDEL 442
A ++V+E+RRR E+ E+ + K+E RR V + EE + LA +++ L
Sbjct: 11 AAEEVEELRRRNGELEREMEEMKKEMVQLWRRTVVAEEA--EERLCSQLAELEVESL 65
>At3g31910.1 68416.m04037 hypothetical protein
Length = 399
Score = 29.9 bits (64), Expect = 1.7
Identities = 18/66 (27%), Positives = 35/66 (53%)
Frame = +2
Query: 278 KDVDEMRRRRNEVTVELRKNKREETLQKRRNVPISYSTDEEEIDKNLATTDLDELVMNAA 457
K V + ++E + +K+ +E L+KR + + S EE++K+L ++ E +AA
Sbjct: 311 KKVTDFIEEKDEEISKKKKDTLKEDLEKRSVLDVQLSNRIEEVEKDL--KEMKESKPDAA 368
Query: 458 NAENPE 475
+ N E
Sbjct: 369 TSRNDE 374
>At3g05760.1 68416.m00647 expressed protein
Length = 202
Score = 29.5 bits (63), Expect = 2.2
Identities = 14/48 (29%), Positives = 29/48 (60%)
Frame = +2
Query: 278 KDVDEMRRRRNEVTVELRKNKREETLQKRRNVPISYSTDEEEIDKNLA 421
+D+DE R++ E EL++ +RE+ +K++ + +E E+D +A
Sbjct: 144 QDLDERIRKQQEEEEELKRQRREKKKEKKKGKVVE---EEPEMDPEVA 188
>At3g18290.1 68416.m02326 zinc finger protein-related weak alignment
to Pfam profiles: PF00097 Zinc finger, C3HC4 type (RING
finger) (2 copies)
Length = 1254
Score = 28.7 bits (61), Expect = 3.9
Identities = 19/54 (35%), Positives = 30/54 (55%)
Frame = +2
Query: 206 RDSEHR*NGD*SSEKPLHVFKNAGKDVDEMRRRRNEVTVELRKNKREETLQKRR 367
+D++H+ D S E +FK KD+ R +NE+ E+RK ++ TL RR
Sbjct: 909 KDNDHQEILDQSGE----LFKPGWKDI--FRMNQNELEAEIRKVYQDSTLDPRR 956
>At4g12710.1 68417.m01995 armadillo/beta-catenin repeat family
protein contains Pfam profile: PF00514
armadillo/beta-catenin-like repeat
Length = 402
Score = 28.3 bits (60), Expect = 5.2
Identities = 19/58 (32%), Positives = 29/58 (50%)
Frame = +1
Query: 523 KNPPIDELIAAGILPILVQCLSRADNPALQFETAWALTNIASGTSAQTNKVVHAGAVP 696
K+ +L AG++P LV L + N + + AL N+A ++V AGAVP
Sbjct: 79 KSSARSKLADAGVIPPLVPMLF-SSNVDARHASLLALLNLAVRNERNKIEIVKAGAVP 135
>At3g20490.1 68416.m02595 expressed protein
Length = 458
Score = 28.3 bits (60), Expect = 5.2
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = -2
Query: 486 ANCASGFSALAAFITSSSRSVVARFLSISSSS 391
A+ ASG S++A+ SSRS + RF + S S
Sbjct: 149 ASAASGISSVASLFQMSSRSPLRRFQLLDSDS 180
>At1g75370.1 68414.m08754 SEC14 cytosolic factor, putative /
phosphatidylinositol transfer-like protein, putative
similar to phosphatidylinositol transfer-like protein
III (GI:14486705) [Lotus japonicus]; contains Pfam
PF00650 : CRAL/TRIO domain; contains Pfam PF03765 :
CRAL/TRIO, N-terminu
Length = 612
Score = 28.3 bits (60), Expect = 5.2
Identities = 18/55 (32%), Positives = 25/55 (45%)
Frame = +2
Query: 272 AGKDVDEMRRRRNEVTVELRKNKREETLQKRRNVPISYSTDEEEIDKNLATTDLD 436
+G +V+EM + V ELR K + R ISY TD E D + +D
Sbjct: 390 SGSEVEEMASPK--VNRELRVPKLTPVCEDIRGTAISYPTDSSEYDSPMVDKVVD 442
>At4g12680.1 68417.m01992 expressed protein ; expression supported
by MPSS
Length = 590
Score = 27.9 bits (59), Expect = 6.8
Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = -1
Query: 301 PAHFIDIFACILEHMQRFFA*SVAILSVLAVSTQYVV-ITQRNK 173
PAHFI + C+ + F + +L +ST+Y+V +T R K
Sbjct: 56 PAHFIWTYYCLARCIPIKFEILCFLFHLLLISTKYLVFVTSRTK 99
>At3g49580.1 68416.m05418 expressed protein
Length = 94
Score = 27.9 bits (59), Expect = 6.8
Identities = 17/57 (29%), Positives = 32/57 (56%)
Frame = +2
Query: 272 AGKDVDEMRRRRNEVTVELRKNKREETLQKRRNVPISYSTDEEEIDKNLATTDLDEL 442
A +++DE+RRR E++ E+ + K E +R V + EE++ LA +++ L
Sbjct: 11 AAEEMDELRRRNIELSREVAEMKTEMIKLWQRTVVAEEA--EEQLCSQLAELEVESL 65
>At2g48120.1 68415.m06024 pale cress protein (PAC) identical to PAC
[Arabidopsis thaliana] gi|1483213|emb|CAA65334
Length = 313
Score = 27.9 bits (59), Expect = 6.8
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = +2
Query: 287 DEMRRRRNEVTVELRKNKREETLQKRRNV 373
DE + R+ E T ELR+ +REE ++ R +
Sbjct: 61 DEWQARQREKTKELRRMQREEEEEEERKI 89
>At5g24660.1 68418.m02914 expressed protein
Length = 94
Score = 27.5 bits (58), Expect = 9.0
Identities = 17/57 (29%), Positives = 29/57 (50%)
Frame = +2
Query: 272 AGKDVDEMRRRRNEVTVELRKNKREETLQKRRNVPISYSTDEEEIDKNLATTDLDEL 442
A +VDE+RR+ E+ + + K+ E LQ R ++ EE + LA + + L
Sbjct: 11 AASEVDELRRKNGEMEKAVEEMKK-EMLQLWRRTQVAEEA-EERLCSQLAELEAESL 65
>At5g04640.1 68418.m00470 MADS-box family protein SLM3 MADS-box
protein, S.latifolia, EMBL:SLSLM3
Length = 322
Score = 27.5 bits (58), Expect = 9.0
Identities = 18/63 (28%), Positives = 31/63 (49%)
Frame = +2
Query: 278 KDVDEMRRRRNEVTVELRKNKREETLQKRRNVPISYSTDEEEIDKNLATTDLDELVMNAA 457
KD+ +++ +R+ +K T QK+ P S S + + +KN DLDE+ +
Sbjct: 117 KDLKDLQNQRDCEEDVKKKGVLHGTHQKQTFNPESCSVNFDGFNKNTEEFDLDEIFDYVS 176
Query: 458 NAE 466
AE
Sbjct: 177 TAE 179
>At1g02570.1 68414.m00208 expressed protein
Length = 431
Score = 27.5 bits (58), Expect = 9.0
Identities = 12/37 (32%), Positives = 17/37 (45%)
Frame = -1
Query: 694 VLHRHGLLCLFVQTFRKLCLLKPKRSRTVTLDCQPSK 584
VLH H +C V + C KR+ + T+ P K
Sbjct: 247 VLHSHLYICWIVLFIAQACAFGIKRTMSTTMSINPDK 283
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,399,035
Number of Sequences: 28952
Number of extensions: 329145
Number of successful extensions: 1114
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1043
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1112
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1496852856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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