Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20371
         (544 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    23   1.7  
DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc gr...    23   2.3  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   4.0  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    22   4.0  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    21   7.0  
AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.           21   7.0  

>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
          protein.
          Length = 392

 Score = 23.0 bits (47), Expect = 1.7
 Identities = 9/27 (33%), Positives = 11/27 (40%)
 Frame = -1

Query: 94 QRACGFCPKPNLRFPFQWCSDHGHSCW 14
          Q  C +   PN       C+D   SCW
Sbjct: 15 QLECNWSSGPNATLQSSACTDDLSSCW 41


>DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc
           growth factor 4 protein.
          Length = 431

 Score = 22.6 bits (46), Expect = 2.3
 Identities = 14/30 (46%), Positives = 16/30 (53%)
 Frame = +1

Query: 19  NYARGHYTIGKEIVDLVLDRIRKLADQCTG 108
           +YAR     G  IVD+ LD  R L   CTG
Sbjct: 392 SYARAKGLGGIAIVDITLDDFRGL---CTG 418


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.8 bits (44), Expect = 4.0
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = -2

Query: 360  YGGRCHRWLHC 328
            Y G C R+LHC
Sbjct: 1287 YPGDCTRYLHC 1297


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.8 bits (44), Expect = 4.0
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = +3

Query: 333 EAIYDICRRNLDIERPTYTNLNRLIGQIV 419
           E I DIC R+ D       ++NR+ G I+
Sbjct: 510 EQIVDICIRSHDKLCDVCDSVNRIFGFII 538


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 21.0 bits (42), Expect = 7.0
 Identities = 7/33 (21%), Positives = 18/33 (54%)
 Frame = +3

Query: 351 CRRNLDIERPTYTNLNRLIGQIVSSITASLRFD 449
           C +     RPT+T L++ +  ++ ++   L+ +
Sbjct: 730 CWKECPKNRPTFTELSKSLEGLLENVAQYLQIE 762



 Score = 20.6 bits (41), Expect = 9.2
 Identities = 12/49 (24%), Positives = 24/49 (48%)
 Frame = +3

Query: 165 FLIDGASLR*LRQEV*TGVRHLPRASGFHCVVEPYNSILTTHTTLEHSD 311
           F+I    L  + ++V  G+ HL +    H  +   N ++  + T++ SD
Sbjct: 587 FIIQPKHLLSIARQVALGMEHLAKTRVVHRDLAARNVLVCENHTVKVSD 635


>AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.
          Length = 290

 Score = 21.0 bits (42), Expect = 7.0
 Identities = 11/47 (23%), Positives = 21/47 (44%)
 Frame = +3

Query: 282 TTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVS 422
           T H    +++    V  E IY+ CR    I +P   + +  +  +V+
Sbjct: 35  TEHNYTHNNEMYHSVKEEPIYESCR--FSINQPYLNHFDNSVTPMVN 79


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 118,984
Number of Sequences: 336
Number of extensions: 2392
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13306679
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)